Data search
Results for MligTC455_12129
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12129 | 9 | 0.19 | Mlig455_019289, Mlig455_066915 | Neo: - Age: - |
Mlig455_019289 {REF} {Length: 946} {RNA1509_19049} {RNA1310_24175.1} {RNA815_21371.1} Mlig455_066915 {REF} {Length: 1020} {RNA1509_19049} {RNA1310_24175.1} {RNA815_21371.1} |
Cumulative graph for MligTC455_12129
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_12129
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12129 | 9 | 0.19 | Mlig455_019289, Mlig455_066915 | Neo: - Age: - |
2 | - | 1.000 | - | - | - | 1.000 | Mlig455_019289 {REF} {Length: 946} {RNA1509_19049} {RNA1310_24175.1} {RNA815_21371.1} Mlig455_066915 {REF} {Length: 1020} {RNA1509_19049} {RNA1310_24175.1} {RNA815_21371.1} |
|
| 2. | MligTC455_07686 | 179 | 3.73 | Mlig455_057118 | Neo: - Age: Down-Up-Up Region-specific R4: 4.534 Region-enriched R4: 5.303/0.00000 Regeneration-downregulated R4: -3.449 Regeneration-depleted R4: -3.449 |
0.987 | - | - | - | - | - | 0.987 | Mlig455_057118 {REF} {Length: 811} {RNA1509_38781} {RNA1310_24138, RNA1509_38781} {RNA1509_38781, RNA815_31175} | |
| 3. | MligTC455_33992 | 126 | 2.62 | Mlig455_022511 | Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.421 Region-specific R4: 6.174 |
0.976 | - | - | - | - | - | 0.976 | Mlig455_022511 {REF} {Length: 5447} {RNA1509_15103} {RNA1310_4294.1} {RNA815_17182} | |
| 4. | MligTC455_10762 | 58 | 1.2 | Mlig455_001079 | Neo: Int S/G2/M Age: - Region-enriched R4: 4.136/0.00765 |
0.969 | - | - | - | - | - | 0.969 | Mlig455_001079 {REF} {Length: 1867} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=66.1]; Dimerisation domain of Zinc Transporter [PF16916.7, score=25.5]} {Celegans: WBGene00018948, F56C9.3, [Score=147, Expect=2e-39]} {Smed: dd_Smed_v6_12060_0_1, dd_Smed_v6_12060_0_1, [Score=158, Expect=9e-44]} {RNA1310_18988.1} {RNA815_10151.1} | |
| 5. | MligTC455_33164 | 33 | 0.69 | Mlig455_045293 | Neo: - Age: - Region-enriched R4: 3.352/0.03720 |
OPN4 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_045293 {REF} {Length: 2627} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=38.9]} {Human: ENSG00000122375, OPN4, opsin 4, [Score=49.3, Expect=9e-06]} {RNA1509_45595} {RNA1310_47354} {RNA815_31014} |
| 6. | MligTC455_22746 | 22 | 0.45 | Mlig455_032638 | Neo: Germline Age: Up-Down-Down |
PKM | 0.958 | - | - | - | - | - | 0.958 | Mlig455_032638 {REF} {Length: 4994} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=319.4]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=48.9]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [Score=356, Expect=3e-115]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [Score=343, Expect=1e-110]; ENSMUSG00000041237, Pklr, pyruvate kinase liver and red blood cell, [Score=333, Expect=1e-106]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [Score=310, Expect=3e-98]} {Celegans: WBGene00014001, pyk-2, Pyruvate kinase, [Score=367, Expect=4e-120]} {Smed: dd_Smed_v6_2738_0_1, dd_Smed_v6_2738_0_1, [Score=365, Expect=5e-119]} {RNA1509_14843} {RNA1310_6763} {RNA815_20251} |
| 7. | MligTC455_33443 | 29 | 0.61 | Mlig455_018241, Mlig455_020027, Mlig455_052956 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_018241 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804} Mlig455_020027 {REF} {Length: 1060} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804} Mlig455_052956 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804} |
|
| 8. | MligTC455_00801 | 10 | 0.2 | Mlig455_032874 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_032874 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_26475} | |
| 9. | MligTC455_10725 | 140 | 2.92 | Mlig455_016936 | Neo: Germline Age: - |
B3GALNT1 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_016936 {REF} {Length: 2380} {Pfam: Galactosyltransferase [PF01762.23, score=84.6]} {Human: ENSG00000169255, B3GALNT1, beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group), [Score=64.7, Expect=6e-11]} {Mouse: ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=65.9, Expect=2e-11]; ENSMUSG00000043300, B3galnt1, UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1, [Score=63.5, Expect=1e-10]; ENSMUSG00000069920, B3gnt9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=62.8, Expect=2e-10]} {Dmel: FBgn0031988, CG8668, [Score=63.5, Expect=1e-10]} {Celegans: WBGene00008291, C54C8.3, Hexosyltransferase, [Score=70.9, Expect=2e-13]} {Smed: dd_Smed_v6_9789_0_1, dd_Smed_v6_9789_0_1, [Score=68.6, Expect=8e-13]} {RNA1509_35635} {RNA1310_21104.3} {RNA815_8860.1} |
| 10. | MligTC455_11226 | 171 | 3.57 | Mlig455_010762 | Neo: - Age: - Region-enriched R8: 5.355/0.00388 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_010762 {REF} {Length: 826} {RNA1509_21716} {RNA1310_48870} {RNA815_12215.2} | |
| 11. | MligTC455_44358 | 43 | 0.9 | Mlig455_070427 | Neo: Germline Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_070427 {REF} {Length: 1483} {TRANSSPLICED} {RNA1509_8535} {RNA1310_21622} {RNA815_8801} | |
| 12. | MligTC455_10726 | 403 | 8.41 | Mlig455_016922, Mlig455_017022, Mlig455_017026 | Neo: Irradiation Age: Up-Down-Up Region-enriched R7: 3.844/0.00115 |
B3GALNT1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_016922 {REF} {Length: 2281} {Pfam: Galactosyltransferase [PF01762.23, score=84.8]} {Human: ENSG00000169255, B3GALNT1, beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group), [Score=64.3, Expect=8e-11]} {Mouse: ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=66.2, Expect=1e-11]; ENSMUSG00000043300, B3galnt1, UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1, [Score=63.2, Expect=1e-10]} {Dmel: FBgn0031988, CG8668, [Score=64.3, Expect=6e-11]} {Celegans: WBGene00008291, C54C8.3, Hexosyltransferase, [Score=69.7, Expect=4e-13]} {Smed: dd_Smed_v6_9789_0_1, dd_Smed_v6_9789_0_1, [Score=70.5, Expect=2e-13]} {RNA1509_35635} {RNA1310_21104.3} {RNA815_8860.1} Mlig455_017022 {REF} {Length: 1895} {Pfam: Galactosyltransferase [PF01762.23, score=84.8]} {Human: ENSG00000169255, B3GALNT1, beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group), [Score=64.3, Expect=8e-11]} {Mouse: ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=66.2, Expect=1e-11]; ENSMUSG00000069920, B3gnt9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=63.2, Expect=2e-10]} {Dmel: FBgn0031988, CG8668, [Score=64.7, Expect=5e-11]} {Celegans: WBGene00008291, C54C8.3, Hexosyltransferase, [Score=69.7, Expect=4e-13]} {Smed: dd_Smed_v6_9789_0_1, dd_Smed_v6_9789_0_1, [Score=70.5, Expect=2e-13]} {RNA1509_35635} {RNA1310_21104.2} {RNA815_8860.1} Mlig455_017026 {REF} {Length: 1951} {Pfam: Galactosyltransferase [PF01762.23, score=62.8]} {Dmel: FBgn0053145, GalT1, beta1,3-galactosyltransferase 1, [Score=54.3, Expect=8e-08]} {Smed: dd_Smed_v6_9789_0_1, dd_Smed_v6_9789_0_1, [Score=50.1, Expect=8e-07]} {RNA1509_35635} {RNA1310_21104.2} {RNA815_8860.1} |
| 13. | MligTC455_52301 | 46 | 0.96 | Mlig455_011647, Mlig455_049933 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_011647 {REF} {Length: 2095} {RNA1310_60418} {RNA815_33518} Mlig455_049933 {REF} {Length: 1578} {RNA1310_60418} {RNA815_33518} |