TomoSeq data search

Data search

Results for MligTC455_12344

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12344

288

5.99

Mlig455_049021

Neo: -

Age: -

TFE3

Mlig455_049021 {REF} {Length: 5052} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=51.8]} {Human: ENSG00000068323, TFE3, transcription factor binding to IGHM enhancer 3, [Score=87.4, Expect=4e-18]; ENSG00000187098, MITF, melanogenesis associated transcription factor, [Score=86.3, Expect=1e-17]} {Mouse: ENSMUSG00000000134, Tfe3, transcription factor E3, [Score=88.2, Expect=2e-18]; ENSMUSG00000035158, Mitf, melanogenesis associated transcription factor, [Score=85.1, Expect=1e-17]} {Dmel: FBgn0263112, Mitf, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00020930, hlh-30, Helix Loop Helix, [RH, Score=82.0, Expect=8e-17]} {Smed: dd_Smed_v6_7316_0_1, dd_Smed_v6_7316_0_1, [RH, Score=96.7, Expect=1e-21]} {RNA1509_21102, RNA1509_34002, RNA1509_39043} {RNA1310_25539, RNA1509_21102, RNA1509_34002, RNA1509_39043} {RNA1509_21102, RNA1509_34002, RNA1509_39043, RNA815_21727}

Cumulative graph for MligTC455_12344

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.042	2.815	0.37654	1.00000
RegionR2	0.903	2.815	0.15530	0.49326
RegionR3	0.873	2.815	0.04419	0.36722
RegionR4	-1.285	2.815	0.01341	0.07582
RegionR5	0.368	2.815	0.34884	0.69819
RegionR6	0.34	2.815	0.48089	1.00000
RegionR7	-0.422	2.815	0.53639	1.00000
RegionR8	0.265	2.815	0.72408	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.206	2.815	0.31546	1.00000
RegenerationR2	0.002	2.815	0.99575	1.00000
RegenerationR3	-0.207	2.815	0.71327	0.95274
RegenerationR4	0.168	2.815	0.77641	0.97912
RegenerationR5	0.393	2.815	0.38629	0.78966
RegenerationR6	-0.552	2.815	0.41056	0.74440
RegenerationBL	-0.269	2.815	0.76806	1.00000
RegenerationTP	-0.112	2.815	0.90282	1.00000

Genes with expression patterns similar to MligTC455_12344

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12344	288	5.99	Mlig455_049021	Neo: - Age: -	TFE3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049021 {REF} {Length: 5052} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=51.8]} {Human: ENSG00000068323, TFE3, transcription factor binding to IGHM enhancer 3, [Score=87.4, Expect=4e-18]; ENSG00000187098, MITF, melanogenesis associated transcription factor, [Score=86.3, Expect=1e-17]} {Mouse: ENSMUSG00000000134, Tfe3, transcription factor E3, [Score=88.2, Expect=2e-18]; ENSMUSG00000035158, Mitf, melanogenesis associated transcription factor, [Score=85.1, Expect=1e-17]} {Dmel: FBgn0263112, Mitf, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00020930, hlh-30, Helix Loop Helix, [RH, Score=82.0, Expect=8e-17]} {Smed: dd_Smed_v6_7316_0_1, dd_Smed_v6_7316_0_1, [RH, Score=96.7, Expect=1e-21]} {RNA1509_21102, RNA1509_34002, RNA1509_39043} {RNA1310_25539, RNA1509_21102, RNA1509_34002, RNA1509_39043} {RNA1509_21102, RNA1509_34002, RNA1509_39043, RNA815_21727}
2.	MligTC455_41990	236	4.92	Mlig455_049390	Neo: - Age: logFC(26M/2M)=-0.316	NDST3	1.743	0.779	-	-	-	-	0.964	Mlig455_049390 {REF} {Length: 4227} {Pfam: heparan sulfate-N-deacetylase [PF12062.10, score=459.3]; Sulfotransferase domain [PF00685.29, score=93.0]; Sulfotransferase family [PF13469.8, score=44.1]} {Human: ENSG00000164100, NDST3, N-deacetylase and N-sulfotransferase 3, [RH, Score=684, Expect=0.0]; ENSG00000166507, NDST2, N-deacetylase and N-sulfotransferase 2, [RH, Score=682, Expect=0.0]; ENSG00000070614, NDST1, N-deacetylase and N-sulfotransferase 1, [RH, Score=671, Expect=0.0]; ENSG00000138653, NDST4, N-deacetylase and N-sulfotransferase 4, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000027977, Ndst3, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3, [RH, Score=684, Expect=0.0]; ENSMUSG00000039308, Ndst2, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2, [RH, Score=681, Expect=0.0]; ENSMUSG00000027971, Ndst4, N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4, [RH, Score=671, Expect=0.0]; ENSMUSG00000054008, Ndst1, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0020251, sfl, sulfateless, [RH, Score=722, Expect=0.0]} {Celegans: WBGene00002028, hst-1, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 Heparan sulfate N-deacetylase 1 Heparan sulfate N-sulfotransferase 1, [RH, Score=610, Expect=0.0]} {Smed: dd_Smed_v6_12192_0_2, dd_Smed_v6_12192_0_2, [RH, Score=540, Expect=5e-179]} {RNA1509_9775} {RNA1310_5396} {RNA815_1944}
3.	MligTC455_20751	432	9.01	Mlig455_061318	Neo: Irradiation Age: -	ZC3H3	0.955	-	-	0.955	-	-	-	Mlig455_061318 {REF} {Length: 5472} {TRANSSPLICED} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [Score=50.8, Expect=1e-05]} {RNA1509_15291, RNA1509_28005} {RNA1310_3409.1, RNA1509_15291} {RNA1509_15291, RNA815_8747}
4.	MligTC455_52670	280	5.84	Mlig455_060776	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.342	DHRS7B	0.954	-	-	-	-	-	0.954	Mlig455_060776 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=124.6]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=90.9]; KR domain [PF08659.12, score=35.4]} {Human: ENSG00000109016, DHRS7B, dehydrogenase/reductase 7B, [RH, Score=192, Expect=1e-58]} {Mouse: ENSMUSG00000042569, Dhrs7b, dehydrogenase/reductase (SDR family) member 7B, [RH, Score=196, Expect=1e-60]} {Dmel: FBgn0027583, CG7601, [RH, Score=207, Expect=1e-64]} {Celegans: WBGene00000993, dhs-30, DeHydrogenases, Short chain, [RH, Score=170, Expect=1e-50]} {Smed: dd_Smed_v6_3512_0_1, dd_Smed_v6_3512_0_1, [RH, Score=191, Expect=1e-58]} {RNA1509_32832, RNA1509_37672} {RNA1310_19773, RNA1509_32832, RNA1509_37672} {RNA1509_32832, RNA1509_37672, RNA815_14850}
5.	MligTC455_45599	139	2.89	Mlig455_045989	Neo: - Age: Up-Down-Up		0.95	-	-	-	0.950	-	-	Mlig455_045989 {REF} {Length: 2215} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40051} {RNA1310_8955} {RNA815_1346.2}

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