Data search
Results for MligTC455_12453
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12453 | 180 | 3.76 | Mlig455_066122 | Neo: - Age: Down-Up-Down |
Mlig455_066122 {REF} {Length: 633} {RNA1509_13188} {RNA1310_75818} {RNA815_18950.1} |
Cumulative graph for MligTC455_12453
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.924 | 2.657 | 0.31252 | 0.96165 | |
| RegionR2 | 1.832 | 2.657 | 0.05441 | 0.27936 | |
| RegionR3 | 1.674 | 2.657 | 0.02686 | 0.27969 | |
| RegionR4 | 0.848 | 2.657 | 0.41552 | 0.74309 | |
| RegionR5 | 0.544 | 2.657 | 0.55375 | 0.91442 | |
| RegionR6 | 0.292 | 2.657 | 0.73063 | 1.00000 | |
| RegionR7 | -0.524 | 2.657 | 0.95969 | 1.00000 | |
| RegionR8 | 0.257 | 2.657 | 0.77926 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.105 | 2.657 | 0.99988 | 1.00000 | |
| RegenerationR2 | -0.68 | 2.657 | 0.21568 | 0.66296 | |
| RegenerationR3 | -0.404 | 2.657 | 0.52271 | 0.86832 | |
| RegenerationR4 | -0.246 | 2.657 | 0.71758 | 0.96046 | |
| RegenerationR5 | -0.294 | 2.657 | 0.62988 | 0.92252 | |
| RegenerationR6 | -0.406 | 2.657 | 0.58764 | 0.86246 | |
| RegenerationBL | -1.307 | 2.657 | 0.33339 | 0.70004 | |
| RegenerationTP | 0.708 | 2.657 | 0.50132 | 0.90147 |
Genes with expression patterns similar to MligTC455_12453
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12453 | 180 | 3.76 | Mlig455_066122 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066122 {REF} {Length: 633} {RNA1509_13188} {RNA1310_75818} {RNA815_18950.1} | |
| 2. | MligTC455_43787 | 37 | 0.77 | Mlig455_054406 | Neo: - |
CCDC60 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_054406 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4698) [PF15769.7, score=170.4]} {Human: ENSG00000183273, CCDC60, coiled-coil domain containing 60, [Score=62.8, Expect=2e-09]} {Mouse: ENSMUSG00000043913, Ccdc60, coiled-coil domain containing 60, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_14286_0_1, dd_Smed_v6_14286_0_1, [Score=115, Expect=2e-26]} {RNA1509_58886} {RNA1310_1558.2} {RNA815_11153} |
| 3. | MligTC455_51755 | 191 | 3.98 | Mlig455_003565 | Neo: - Age: Up-Up-Down |
0.969 | - | - | - | - | - | 0.969 | Mlig455_003565 {REF} {Length: 2379} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=54.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=21.0]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=19.7]} {RNA1509_16270} {RNA1310_6515} {RNA815_8558} | |
| 4. | MligTC455_42455 | 161 | 3.35 | Mlig455_005868, Mlig455_018891 | Neo: - Age: Up-Down-Up |
NYNRIN | 0.965 | - | - | - | - | - | 0.965 | Mlig455_005868 {REF} {Length: 4106} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=94.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.0]; Integrase zinc binding domain [PF17921.3, score=52.8]; Integrase core domain [PF00665.28, score=45.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Aspartyl protease [PF13650.8, score=21.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=72.0, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=4e-11]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=68.6, Expect=5e-11]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=68.6, Expect=5e-11]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=1e-72]} {RNA1509_29592} {RNA1310_10223} {RNA815_18935} Mlig455_018891 {REF} {Length: 793} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=94.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.0]; Integrase zinc binding domain [PF17921.3, score=52.8]; Integrase core domain [PF00665.28, score=45.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Aspartyl protease [PF13650.8, score=21.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=72.0, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=4e-11]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=68.6, Expect=5e-11]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=68.6, Expect=5e-11]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=1e-72]} {RNA1509_29592} {RNA1310_10223} {RNA815_25405.1} |
| 5. | MligTC455_53175 | 150 | 3.12 | Mlig455_024313, Mlig455_024369 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_024313 {REF} {Length: 800} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=59.2]} {Dmel: FBgn0013467, igl, igloo, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_4783_0_67, dd_Smed_v6_4783_0_67, [Score=75.1, Expect=3e-14]} {RNA1310_37981} Mlig455_024369 {REF} {Length: 562} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=59.2]} {Dmel: FBgn0013467, igl, igloo, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_4783_0_67, dd_Smed_v6_4783_0_67, [Score=75.1, Expect=3e-14]} {RNA1310_37981} |
|
| 6. | MligTC455_23368 | 668 | 13.92 | Mlig455_054907, Mlig455_065613 | Neo: - Age: Up-Down-Down Region-enriched R2: 1.477/0.03292 Regeneration-downregulated BL: -6.941 Regeneration-depleted BL: -6.941 |
HYDIN | 0.957 | - | - | - | - | - | 0.957 | Mlig455_054907 {REF} {Length: 16643} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=154.0]; Hydin Adenylate kinase-like domain [PF17213.5, score=152.1]; Protein of unknown function (DUF1573) [PF07610.13, score=63.0]; Transmembrane protein 131-like N-terminal [PF12371.10, score=51.1]; MSP (Major sperm protein) domain [PF00635.28, score=50.4]; Flagellar-associated PapD-like [PF14874.8, score=37.3]} {Human: ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1843, Expect=0.0]; ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1843, Expect=0.0]} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [Score=1886, Expect=0.0]} {Smed: dd_Smed_v6_7302_1_1, dd_Smed_v6_7302_1_1, [Score=2045, Expect=0.0]} {RNA1509_631} {RNA1310_26.1} {RNA815_190} Mlig455_065613 {REF} {Length: 16716} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=160.6]; Hydin Adenylate kinase-like domain [PF17213.5, score=152.7]; Protein of unknown function (DUF1573) [PF07610.13, score=62.9]; MSP (Major sperm protein) domain [PF00635.28, score=50.6]; Transmembrane protein 131-like N-terminal [PF12371.10, score=50.4]; Flagellar-associated PapD-like [PF14874.8, score=37.6]; Ig-like domain [PF16392.7, score=20.8]} {Human: ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [RH, Score=1952, Expect=0.0]; ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [RH, Score=1952, Expect=0.0]} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [RH, Score=2003, Expect=0.0]} {Smed: dd_Smed_v6_7302_1_1, dd_Smed_v6_7302_1_1, [RH, Score=2169, Expect=0.0]} {RNA1509_631} {RNA1310_26.1} {RNA815_190} |
| 7. | MligTC455_33301 | 346 | 7.2 | Mlig455_013435 | Neo: - Age: - Region-enriched R4: 2.102/0.01016 |
NWD1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_013435 {REF} {Length: 7733} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=43.4]; AAA ATPase domain [PF13191.8, score=38.2]; NACHT domain [PF05729.14, score=22.3]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=277, Expect=1e-74]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=289, Expect=2e-78]} {Dmel: FBgn0038397, CG10185, [Score=344, Expect=1e-95]} {Celegans: WBGene00020254, T05C3.2, [Score=344, Expect=1e-95]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [RH, Score=590, Expect=5e-178]} {RNA1509_43117, RNA1509_6546} {RNA1310_677.1, RNA1509_43117} {RNA1509_43117, RNA815_4957} |
| 8. | MligTC455_50924 | 80 | 1.67 | Mlig455_025602 | Neo: - Age: Up-Up-Down |
NELFE | 0.953 | - | - | - | - | - | 0.953 | Mlig455_025602 {REF} {Length: 1327} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.3]} {Human: ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692} {RNA1310_22114} {RNA815_11055} |
| 9. | MligTC455_32742 | 187 | 3.9 | Mlig455_064981 | Neo: - Age: - Region-enriched R4: 2.677/0.04748 |
KY | 0.95 | - | - | - | - | - | 0.950 | Mlig455_064981 {REF} {Length: 6268} {TRANSSPLICED} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=33.7]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=127, Expect=9e-30]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=131, Expect=6e-31]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=220, Expect=2e-59]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=204, Expect=8e-57]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [Score=461, Expect=1e-147]} {RNA1509_1987} {RNA1310_669} {RNA815_5918.1} |
| 10. | MligTC455_49372 | 354 | 7.38 | Mlig455_000027, Mlig455_063730 | Neo: - Age: Up-Down-Up |
ECT2 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_000027 {REF} {Length: 2943} {Pfam: RhoGEF domain [PF00621.22, score=121.5]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=71.6, Expect=3e-12]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=70.1, Expect=5e-12]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=68.9, Expect=2e-11]} {Dmel: FBgn0262562, CG43102, [Score=81.3, Expect=2e-15]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [Score=60.1, Expect=4e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=59.3, Expect=6e-09]} {RNA1509_60002} {RNA1310_20096} {RNA815_13312} Mlig455_063730 {REF} {Length: 4407} {Pfam: RhoGEF domain [PF00621.22, score=122.0]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=71.2, Expect=4e-12]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=70.1, Expect=5e-12]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=68.6, Expect=2e-11]} {Dmel: FBgn0262562, CG43102, [Score=82.4, Expect=6e-16]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=58.9, Expect=7e-09]} {RNA1509_60002} {RNA1310_20096} {RNA815_13312} |