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Results for MligTC455_12505

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12505 15 0.31 Mlig455_044909

Neo: -

Age: -

 Mlig455_044909 {REF} {Length: 1422} {NoTransDecoderORF} {RNA1509_39091} {RNA1310_103205} {RNA815_50587}

Cumulative graph for MligTC455_12505

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.955 0.692 0.99991 1.00000
RegionR2 1.856 0.692 0.99987 1.00000
RegionR3 -0.261 0.692 0.99989 1.00000
RegionR4 -2.013 0.692 0.99976 1.00000
RegionR5 -1.123 0.692 0.99978 1.00000
RegionR6 -0.332 0.692 0.99989 1.00000
RegionR7 1.176 0.692 0.99993 1.00000
RegionR8 1.651 0.692 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.902 0.692 0.99990 1.00000
RegenerationR2 2.191 0.692 0.06490 0.41721
RegenerationR3 3.04 0.692 0.11523 0.52968
RegenerationR4 2.871 0.692 0.14083 0.56311
RegenerationR5 4.161 0.692 0.03002 0.29011
RegenerationR6 0.076 0.692 0.99989 1.00000
RegenerationBL -1.071 0.692 0.99996 1.00000
RegenerationTP -0.06 0.692 0.71008 1.00000


Genes with expression patterns similar to MligTC455_12505

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12505 15 0.31 Mlig455_044909

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_044909 {REF} {Length: 1422} {NoTransDecoderORF} {RNA1509_39091} {RNA1310_103205} {RNA815_50587}
2. MligTC455_12506 25 0.52 Mlig455_055541

Neo: -

Age: -

 0.988 - - - - 0.988 - Mlig455_055541 {REF} {Length: 1496} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_35132} {RNA815_14295}
3. MligTC455_10720 12 0.26 Mlig455_042129

Neo: Irradiation

Age: Up-Down-Down

 0.986 - - - - 0.986 - Mlig455_042129 {REF} {Length: 3078} {Pfam: F5/8 type C domain [PF00754.27, score=24.3]; PAN domain [PF00024.28, score=19.7]} {RNA1509_21706} {RNA1310_79817} {RNA815_41563}
4. MligTC455_11117 14 0.29 Mlig455_018561

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_018561 {REF} {Length: 721} {NoTransDecoderORF} {RNA1509_35533} {RNA1310_20400}
5. MligTC455_12662 14 0.28 Mlig455_004109

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_004109 {REF} {Length: 398} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_138680} {RNA815_19856}
6. MligTC455_25419 192 4 Mlig455_021972

Neo: Int S/G2/M

Age: -

 CRNKL1 0.977 - - - - 0.977 - Mlig455_021972 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: HAT (Half-A-TPR) repeat [PF02184.18, score=132.8]; Tetratricopeptide repeat [PF13428.8, score=82.7]; Suppressor of forked protein (Suf) [PF05843.16, score=55.2]; Tetratricopeptide repeat [PF14559.8, score=53.1]; Tetratricopeptide repeat [PF13432.8, score=40.3]; Mad3/BUB1 homology region 1 [PF08311.14, score=36.0]; Tetratricopeptide repeat [PF07719.19, score=33.8]; Tetratricopeptide repeat [PF13371.8, score=29.2]; Tetratricopeptide repeat [PF13431.8, score=26.5]; NRDE-2, necessary for RNA interference [PF08424.12, score=24.6]; Tetratricopeptide repeat [PF13181.8, score=21.3]} {Human: ENSG00000101343, CRNKL1, crooked neck pre-mRNA splicing factor 1, [RH, Score=877, Expect=0.0]} {Mouse: ENSMUSG00000001767, Crnkl1, crooked neck pre-mRNA splicing factor 1, [RH, Score=877, Expect=0.0]} {Dmel: FBgn0000377, crn, crooked neck, [RH, Score=813, Expect=0.0]} {Celegans: WBGene00019762, M03F8.3, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_4749_0_1, dd_Smed_v6_4749_0_1, [RH, Score=632, Expect=0.0]} {RNA1509_44179, RNA1509_8200} {RNA1310_9194, RNA1509_44179} {RNA1509_44179, RNA815_2997}
7. MligTC455_14832 14 0.29 Mlig455_022410

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_022410 {REF} {Length: 1289} {Pfam: WSC domain [PF01822.21, score=51.2]; PAN domain [PF00024.28, score=24.4]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=50.1, Expect=7e-07]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=47.4, Expect=4e-06]} {RNA1310_101535}
8. MligTC455_14836 12 0.26 Mlig455_069790

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_069790 {REF} {Length: 1585} {NoTransDecoderORF}
9. MligTC455_30614 43 0.89 Mlig455_014524

Neo: -

Age: Down-Up-Down

 0.967 - - - - 0.967 - Mlig455_014524 {REF} {Length: 1462} {RNA1509_56475} {RNA1310_28132, RNA1509_56475} {RNA1509_56475, RNA815_12515}
10. MligTC455_04099 4 0.08 Mlig455_052697

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_052697 {REF} {Length: 4673}
11. MligTC455_46312 71 1.48 Mlig455_055814

Neo: -

Age: -

 NISCH 0.962 - - - - 0.962 - Mlig455_055814 {REF} {Length: 4224} {Pfam: Leucine-rich repeat [PF14580.8, score=46.7]; PX domain [PF00787.26, score=46.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.8]; Leucine rich repeat [PF13855.8, score=34.3]} {Human: ENSG00000010322, NISCH, nischarin, [RH, Score=316, Expect=2e-97]} {Mouse: ENSMUSG00000021910, Nisch, nischarin, [RH, Score=310, Expect=2e-95]} {Dmel: FBgn0033996, CG11807, [RH, Score=231, Expect=2e-66]} {Celegans: WBGene00008750, F13E9.1, [RH, Score=218, Expect=4e-62]} {Smed: dd_Smed_v6_8533_0_5, dd_Smed_v6_8533_0_5, [RH, Score=228, Expect=2e-65]} {RNA1509_31748} {RNA1310_12578} {RNA815_13327}
12. MligTC455_03341 78 1.62 Mlig455_065359

Neo: -

Age: Up-Down-Up

 0.958 - - - - 0.958 - Mlig455_065359 {REF} {Length: 2340} {TRANSSPLICED} {RNA1509_28552} {RNA1310_15555} {RNA815_4371}
13. MligTC455_08916 9 0.2 Mlig455_009151

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_009151 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_49412} {RNA815_40095}
14. MligTC455_22686 26 0.55 Mlig455_000566, Mlig455_030366

Neo: -

Age: -

 GRIK3 0.958 - - - - 0.958 -

Mlig455_000566 {REF} {Length: 2943} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Ligand-gated ion channel [PF00060.28, score=52.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=48.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=157, Expect=5e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=154, Expect=6e-38]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=154, Expect=7e-38]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=152, Expect=2e-37]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=151, Expect=4e-37]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=150, Expect=4e-37]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=145, Expect=2e-35]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=147, Expect=4e-36]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=137, Expect=4e-33]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=155, Expect=5e-39]} {RNA1310_20394.1} {RNA815_45848}

Mlig455_030366 {REF} {Length: 2933} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Ligand-gated ion channel [PF00060.28, score=51.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=48.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=157, Expect=4e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=154, Expect=5e-38]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=152, Expect=2e-37]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=151, Expect=4e-37]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=150, Expect=5e-37]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=150, Expect=4e-37]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=145, Expect=3e-35]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=144, Expect=9e-35]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=147, Expect=5e-36]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=137, Expect=5e-33]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=154, Expect=1e-38]} {RNA1310_20394.1} {RNA815_45848}
15. MligTC455_09580 19 0.4 Mlig455_010996

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_010996 {REF} {Length: 1464} {NoTransDecoderORF} {RNA1310_106744} {RNA815_31856}
16. MligTC455_43644 59 1.24 Mlig455_001464

Neo: Int S/G2/M

Age: -

 PMS2 0.953 - - - - 0.953 - Mlig455_001464 {REF} {Length: 5111} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=72.1]; MutL C terminal dimerisation domain [PF08676.13, score=63.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=21.4]} {Human: ENSG00000122512, PMS2, PMS1 homolog 2, mismatch repair system component, [RH, Score=312, Expect=1e-92]} {Mouse: ENSMUSG00000079109, Pms2, PMS1 homolog2, mismatch repair system component, [RH, Score=314, Expect=1e-93]} {Dmel: FBgn0011660, Pms2, [RH, Score=269, Expect=4e-77]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [RH, Score=245, Expect=2e-69]} {Smed: dd_Smed_v6_16760_0_2, dd_Smed_v6_16760_0_2, [RH, Score=260, Expect=2e-76]} {RNA1509_20911} {RNA1310_4642, RNA1509_20911} {RNA1509_20911, RNA815_7455}

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