Data search


search
Exact
Search

Results for MligTC455_12529

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12529 399 8.31 Mlig455_052255, Mlig455_052298

Neo: -

Age: logFC(26M/2M)=-0.985

Mlig455_052255 {REF} {Length: 3579} {Smed: dd_Smed_v6_7135_0_1, dd_Smed_v6_7135_0_1, [Score=48.1, Expect=6e-06]} {RNA1509_38153} {RNA1310_17503.1} {RNA815_6591}

Mlig455_052298 {REF} {Length: 3574} {Smed: dd_Smed_v6_7135_0_1, dd_Smed_v6_7135_0_1, [Score=49.3, Expect=3e-06]} {RNA1509_38153, RNA1509_44879} {RNA1310_17503.1, RNA1509_44879} {RNA1509_44879, RNA815_6591}

Cumulative graph for MligTC455_12529

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.07 3.461 0.12386 0.71803
RegionR2 0.496 3.461 0.59661 0.94820
RegionR3 1.283 3.461 0.07652 0.48988
RegionR4 0.487 3.461 0.60340 0.91596
RegionR5 0.324 3.461 0.68865 1.00000
RegionR6 0.471 3.461 0.59441 1.00000
RegionR7 1.35 3.461 0.11321 0.63794
RegionR8 1.658 3.461 0.08256 0.54536

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.781 3.461 0.99992 1.00000
RegenerationR2 -0.322 3.461 0.51308 0.87717
RegenerationR3 -0.79 3.461 0.12284 0.54279
RegenerationR4 -0.177 3.461 0.75328 0.97039
RegenerationR5 0.11 3.461 0.82332 0.99527
RegenerationR6 0.898 3.461 0.08547 0.36596
RegenerationBL -0.764 3.461 0.23896 0.59265
RegenerationTP -0.84 3.461 0.20207 0.64373


Genes with expression patterns similar to MligTC455_12529

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12529 399 8.31 Mlig455_052255, Mlig455_052298

Neo: -

Age: logFC(26M/2M)=-0.985

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_052255 {REF} {Length: 3579} {Smed: dd_Smed_v6_7135_0_1, dd_Smed_v6_7135_0_1, [Score=48.1, Expect=6e-06]} {RNA1509_38153} {RNA1310_17503.1} {RNA815_6591}

Mlig455_052298 {REF} {Length: 3574} {Smed: dd_Smed_v6_7135_0_1, dd_Smed_v6_7135_0_1, [Score=49.3, Expect=3e-06]} {RNA1509_38153, RNA1509_44879} {RNA1310_17503.1, RNA1509_44879} {RNA1509_44879, RNA815_6591}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA