TomoSeq data search

Data search

Results for MligTC455_12627

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12627

8

0.18

Mlig455_047441

Neo: -

Age: -

Mlig455_047441 {REF} {Length: 1178} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=21.4]} {RNA1310_40526.1} {RNA815_22977}

Cumulative graph for MligTC455_12627

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_12627

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12627	8	0.18	Mlig455_047441	Neo: - Age: -		1	-	-	-	-	-	1.000	Mlig455_047441 {REF} {Length: 1178} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=21.4]} {RNA1310_40526.1} {RNA815_22977}
2.	MligTC455_10573	11	0.22	Mlig455_065223	Neo: - Age: -		0.974	-	-	-	-	-	0.974	Mlig455_065223 {REF} {Length: 1493} {Pfam: Immunoglobulin domain [PF13927.8, score=49.2]; Immunoglobulin V-set domain [PF07686.19, score=40.9]; Immunoglobulin domain [PF00047.27, score=37.1]; Immunoglobulin I-set domain [PF07679.18, score=27.5]; Immunoglobulin domain [PF13895.8, score=25.8]; Izumo-like Immunoglobulin domain [PF16706.7, score=20.1]} {RNA1310_19635} {RNA815_29316}
3.	MligTC455_06412	27	0.55	Mlig455_041462, Mlig455_041473	Neo: - Age: - Region-enriched R5: 5.762/0.00030 Regeneration-upregulated R4: 10.498 Regeneration-enriched R4: 10.498	HAND2	0.962	-	-	-	-	-	0.962	Mlig455_041462 {REF} {Length: 903} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=46.2]} {Human: ENSG00000164107, HAND2, heart and neural crest derivatives expressed 2, [Score=60.5, Expect=4e-11]; ENSG00000113196, HAND1, heart and neural crest derivatives expressed 1, [Score=60.1, Expect=9e-11]} {Mouse: ENSMUSG00000037335, Hand1, heart and neural crest derivatives expressed 1, [Score=61.2, Expect=3e-11]; ENSMUSG00000038193, Hand2, heart and neural crest derivatives expressed 2, [Score=60.5, Expect=4e-11]} {Dmel: FBgn0032209, Hand, [Score=65.9, Expect=1e-13]} {Celegans: WBGene00003018, lin-32, [Score=47.8, Expect=3e-07]} {Smed: dd_Smed_v6_13704_0_1, dd_Smed_v6_13704_0_1, [Score=57.4, Expect=3e-10]} Mlig455_041473 {REF} {Length: 889} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=45.4]} {Human: ENSG00000164107, HAND2, heart and neural crest derivatives expressed 2, [Score=60.5, Expect=6e-11]; ENSG00000113196, HAND1, heart and neural crest derivatives expressed 1, [Score=59.7, Expect=9e-11]; ENSG00000172238, ATOH1, atonal bHLH transcription factor 1, [Score=57.8, Expect=1e-09]} {Mouse: ENSMUSG00000037335, Hand1, heart and neural crest derivatives expressed 1, [Score=60.8, Expect=2e-11]; ENSMUSG00000038193, Hand2, heart and neural crest derivatives expressed 2, [Score=60.5, Expect=4e-11]} {Dmel: FBgn0032209, Hand, [Score=65.5, Expect=2e-13]} {Celegans: WBGene00003018, lin-32, [Score=47.4, Expect=4e-07]} {Smed: dd_Smed_v6_13704_0_1, dd_Smed_v6_13704_0_1, [Score=55.5, Expect=1e-09]}
4.	MligTC455_39137	3	0.06	Mlig455_049993	Neo: - Age: -	ASIC3	0.962	-	-	-	-	-	0.962	Mlig455_049993 {REF} {Length: 4235} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=105.2]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=54.3, Expect=3e-07]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=60.8, Expect=2e-09]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=68.6, Expect=4e-12]} {RNA1310_40664} {RNA815_56493}
5.	MligTC455_18620	18	0.38	Mlig455_034822	Neo: - Age: -	NANOS1	0.958	-	-	-	-	-	0.958	Mlig455_034822 {REF} {Length: 991} {Pfam: Nanos RNA binding domain [PF05741.15, score=83.1]} {Human: ENSG00000188613, NANOS1, nanos C2HC-type zinc finger 1, [RH, Score=79.0, Expect=2e-19]} {Mouse: ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [RH, Score=77.8, Expect=2e-18]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [RH, Score=82.8, Expect=7e-19]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [Score=85.5, Expect=7e-21]} {RNA1310_139788}
6.	MligTC455_51220	221	4.61	Mlig455_046887	Neo: Germline Age: logFC(26M/2M)=-0.538 Region-enriched R4: 2.884/0.03265	C18orf63	0.956	-	-	-	-	-	0.956	Mlig455_046887 {REF} {Length: 2309} {Pfam: Domain of unknown function (DUF4708) [PF15813.7, score=178.6]} {Human: ENSG00000206043, C18orf63, chromosome 18 open reading frame 63, [RH, Score=106, Expect=2e-24]} {RNA1509_25924} {RNA1310_22527.1, RNA1509_25924} {RNA1509_25924, RNA815_14625}
7.	MligTC455_18518	14	0.3	Mlig455_066631	Neo: - Age: Down-Up-Up		0.951	-	-	-	-	-	0.951	Mlig455_066631 {REF} {Length: 893} {RNA1310_43255} {RNA815_56258}

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