Data search
Results for MligTC455_12831
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12831 | 14 | 0.29 | Mlig455_057394 | Neo: - Age: Up-Down-Up |
PRR9 | Mlig455_057394 {REF} {Length: 3426} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.1, Expect=2e-07]} {RNA1509_43825} {RNA1310_32070} {RNA815_26456} |
Cumulative graph for MligTC455_12831
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_12831
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12831 | 14 | 0.29 | Mlig455_057394 | Neo: - Age: Up-Down-Up |
PRR9 | 1 | - | - | - | 1.000 | - | - | Mlig455_057394 {REF} {Length: 3426} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.1, Expect=2e-07]} {RNA1509_43825} {RNA1310_32070} {RNA815_26456} |
| 2. | MligTC455_11993 | 50 | 1.05 | Mlig455_009030 | Neo: - Age: - |
VWDE | 0.989 | - | - | - | 0.989 | - | - | Mlig455_009030 {REF} {Length: 3150} {Pfam: EGF-like domain [PF07974.15, score=63.1]; Human growth factor-like EGF [PF12661.9, score=50.6]; Agrin NtA domain [PF03146.17, score=41.8]; Thrombospondin type 1 domain [PF00090.21, score=39.6]; EGF-like domain [PF00008.29, score=33.0]; Thrombospondin type 1 domain [PF19030.2, score=23.9]} {Human: ENSG00000146530, VWDE, von Willebrand factor D and EGF domains, [RH, Score=121, Expect=9e-28]; ENSG00000156076, WIF1, WNT inhibitory factor 1, [RH, Score=119, Expect=2e-28]} {Mouse: ENSMUSG00000079679, Vwde, von Willebrand factor D and EGF domains, [RH, Score=135, Expect=2e-32]} {Dmel: FBgn0003390, shf, shifted, [RH, Score=102, Expect=7e-23]} {Celegans: WBGene00011326, T01D3.1, [Score=92.8, Expect=4e-19]} {Smed: dd_Smed_v6_20318_0_1, dd_Smed_v6_20318_0_1, [RH, Score=228, Expect=2e-65]} {RNA1509_42369} {RNA1310_21266} {RNA815_29273} |
| 3. | MligTC455_51066 | 526 | 10.97 | Mlig455_044665, Mlig455_044724 | Neo: - Age: Down-Up-Down Region-enriched R8: 5.381/0.00000 |
0.973 | - | - | - | 0.973 | - | - | Mlig455_044665 {REF} {Length: 1268} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975} Mlig455_044724 {REF} {Length: 1327} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975} |
|
| 4. | MligTC455_41140 | 58 | 1.21 | Mlig455_031451 | Neo: - Age: logFC(26M/2M)=-0.773 Region-enriched R4: 4.458/0.03971 |
SLC6A3 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_031451 {REF} {Length: 2793} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=534.0]} {Human: ENSG00000276996, SLC6A3, solute carrier family 6 member 3, [Score=451, Expect=2e-150]; ENSG00000142319, SLC6A3, solute carrier family 6 member 3, [Score=451, Expect=2e-150]; ENSG00000103546, SLC6A2, solute carrier family 6 member 2, [Score=439, Expect=4e-146]} {Mouse: ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=451, Expect=5e-151]; ENSMUSG00000055368, Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2, [Score=444, Expect=4e-148]} {Dmel: FBgn0010414, SerT, Serotonin transporter, [Score=421, Expect=5e-139]} {Celegans: WBGene00003387, mod-5, Transporter, [Score=372, Expect=1e-119]} {Smed: dd_Smed_v6_22486_0_1, dd_Smed_v6_22486_0_1, [Score=496, Expect=2e-168]} {RNA1509_9639} {RNA1310_4480.1} {RNA815_1493} |
| 5. | MligTC455_46417 | 37 | 0.76 | Mlig455_061456 | Neo: - |
HDAC4 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_061456 {REF} {Length: 4466} {Pfam: Histone deacetylase domain [PF00850.21, score=276.3]} {Human: ENSG00000068024, HDAC4, histone deacetylase 4, [RH, Score=410, Expect=5e-130]; ENSG00000048052, HDAC9, histone deacetylase 9, [RH, Score=397, Expect=5e-124]} {Mouse: ENSMUSG00000026313, Hdac4, histone deacetylase 4, [RH, Score=413, Expect=2e-130]} {Dmel: FBgn0041210, HDAC4, Histone deacetylase 4, [Score=373, Expect=2e-114]} {Celegans: WBGene00001837, hda-4, Histone deacetylase 4, [Score=363, Expect=8e-114]} {Smed: dd_Smed_v6_9385_0_1, dd_Smed_v6_9385_0_1, [Score=418, Expect=4e-135]} {RNA1509_7849} {RNA1310_71485} {RNA815_10834} |
| 6. | MligTC455_42645 | 144 | 3 | Mlig455_012431 | Neo: - Age: - |
KRT8 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_012431 {REF} {Length: 3911} {Pfam: Intermediate filament protein [PF00038.23, score=141.4]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.8]; Protein of unknown function (DUF3450) [PF11932.10, score=18.3]} {Human: ENSG00000170421, KRT8, keratin 8, [RH, Score=109, Expect=9e-25]; ENSG00000185640, KRT79, keratin 79, [RH, Score=105, Expect=2e-23]} {Mouse: ENSMUSG00000063661, Krt73, keratin 73, [RH, Score=104, Expect=2e-23]} {Dmel: FBgn0010397, LamC, Lamin C, [Score=138, Expect=2e-34]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [Score=246, Expect=3e-74]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [Score=271, Expect=9e-84]} {RNA1310_10400} {RNA815_12264} |
| 7. | MligTC455_51640 | 166 | 3.46 | Mlig455_051173, Mlig455_062980 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_051173 {REF} {Length: 1474} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=40.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=18.3]} {Smed: dd_Smed_v6_2174_0_1, dd_Smed_v6_2174_0_1, [Score=81.6, Expect=2e-17]} {RNA1310_26804} {RNA815_17702} Mlig455_062980 {REF} {Length: 2554} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=40.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=18.1]} {Smed: dd_Smed_v6_2174_0_1, dd_Smed_v6_2174_0_1, [Score=81.3, Expect=2e-17]} {RNA1310_26804} {RNA815_17702} |
|
| 8. | MligTC455_29203 | 334 | 6.95 | Mlig455_037140 | Neo: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_037140 {REF} {Length: 5032} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=37.3]; Ankyrin repeat [PF00023.32, score=28.8]; Ankyrin repeat [PF13606.8, score=25.8]; Ankyrin repeats (many copies) [PF13637.8, score=24.6]; Ankyrin repeats (many copies) [PF13857.8, score=22.2]; Mab-21 protein [PF03281.16, score=20.5]} {RNA1509_39416} {RNA1310_14401} {RNA815_5545.1} |
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