TomoSeq data search

Data search

Results for MligTC455_12880

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_12880	5	0.10	Mlig455_036540	Neo: - Age: Up-Down-Down	CYLD	Mlig455_036540 {REF} {Length: 4177} {TRANSSPLICED} {Human: ENSG00000083799, CYLD, CYLD lysine 63 deubiquitinase, [Score=284, Expect=4e-82]} {Mouse: ENSMUSG00000036712, Cyld, CYLD lysine 63 deubiquitinase, [Score=270, Expect=6e-77]} {Dmel: FBgn0032210, CYLD, Cylindromatosis, [RH, Score=312, Expect=2e-95]} {Celegans: WBGene00009594, cyld-1, CYLinDromatosis (Human disease gene) homolog, [Score=197, Expect=2e-52]} {Smed: dd_Smed_v6_3043_0_1, dd_Smed_v6_3043_0_1, [Score=148, Expect=1e-36]} {RNA1509_18711} {RNA1310_5613.1} {RNA815_1700}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_12880

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_12880

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12880	5	0.1	Mlig455_036540	Neo: - Age: Up-Down-Down	CYLD	1	-	-	-	-	-	1.000	Mlig455_036540 {REF} {Length: 4177} {TRANSSPLICED} {Human: ENSG00000083799, CYLD, CYLD lysine 63 deubiquitinase, [Score=284, Expect=4e-82]} {Mouse: ENSMUSG00000036712, Cyld, CYLD lysine 63 deubiquitinase, [Score=270, Expect=6e-77]} {Dmel: FBgn0032210, CYLD, Cylindromatosis, [RH, Score=312, Expect=2e-95]} {Celegans: WBGene00009594, cyld-1, CYLinDromatosis (Human disease gene) homolog, [Score=197, Expect=2e-52]} {Smed: dd_Smed_v6_3043_0_1, dd_Smed_v6_3043_0_1, [Score=148, Expect=1e-36]} {RNA1509_18711} {RNA1310_5613.1} {RNA815_1700}
2.	MligTC455_09620	47	0.98	Mlig455_051588, Mlig455_051621	Neo: - Age: Down-Up-Down		0.971	-	-	-	-	-	0.971	Mlig455_051588 {REF} {Length: 2384} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=23.0]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109} Mlig455_051621 {REF} {Length: 2226} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=24.9]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109}
3.	MligTC455_20228	160	3.33	Mlig455_025853, Mlig455_025915	Neo: Irradiation Age: - Region-enriched R5: 2.361/0.00341	BLM	0.962	-	-	-	-	-	0.962	Mlig455_025853 {REF} {Length: 4872} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.7]; Helicase conserved C-terminal domain [PF00271.33, score=64.4]; RecQ zinc-binding [PF16124.7, score=57.3]; HRDC domain [PF00570.25, score=42.5]; RQC domain [PF09382.12, score=39.4]; Type III restriction enzyme, res subunit [PF04851.17, score=26.0]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [RH, Score=560, Expect=6e-176]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [RH, Score=555, Expect=5e-174]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [RH, Score=568, Expect=1e-178]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=484, Expect=5e-152]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [RH, Score=662, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612} Mlig455_025915 {REF} {Length: 4878} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.6]; Helicase conserved C-terminal domain [PF00271.33, score=64.2]; RecQ zinc-binding [PF16124.7, score=57.2]; HRDC domain [PF00570.25, score=42.4]; RQC domain [PF09382.12, score=39.3]; Type III restriction enzyme, res subunit [PF04851.17, score=25.9]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [RH, Score=558, Expect=1e-174]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [RH, Score=553, Expect=2e-172]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [RH, Score=567, Expect=2e-177]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=483, Expect=3e-151]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [RH, Score=661, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_12880

0.1

Mlig455_036540

Neo: -

Age: Up-Down-Down

CYLD

1.000

MligTC455_09620

0.98

Mlig455_051588, Mlig455_051621

Neo: -

Age: Down-Up-Down

0.971

Mlig455_051588 {REF} {Length: 2384} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=23.0]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109}

Mlig455_051621 {REF} {Length: 2226} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=24.9]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109}

MligTC455_20228

160

3.33

Mlig455_025853, Mlig455_025915

Neo: Irradiation

Age: -

Region-enriched R5: 2.361/0.00341

BLM

0.962

Mlig455_025853 {REF} {Length: 4872} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.7]; Helicase conserved C-terminal domain [PF00271.33, score=64.4]; RecQ zinc-binding [PF16124.7, score=57.3]; HRDC domain [PF00570.25, score=42.5]; RQC domain [PF09382.12, score=39.4]; Type III restriction enzyme, res subunit [PF04851.17, score=26.0]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [RH, Score=560, Expect=6e-176]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [RH, Score=555, Expect=5e-174]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [RH, Score=568, Expect=1e-178]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=484, Expect=5e-152]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [RH, Score=662, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}

Mlig455_025915 {REF} {Length: 4878} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.6]; Helicase conserved C-terminal domain [PF00271.33, score=64.2]; RecQ zinc-binding [PF16124.7, score=57.2]; HRDC domain [PF00570.25, score=42.4]; RQC domain [PF09382.12, score=39.3]; Type III restriction enzyme, res subunit [PF04851.17, score=25.9]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [RH, Score=558, Expect=1e-174]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [RH, Score=553, Expect=2e-172]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [RH, Score=567, Expect=2e-177]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=483, Expect=3e-151]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [RH, Score=661, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}