TomoSeq data search

Data search

Results for MligTC455_12887

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12887

17

0.34

Mlig455_023360

Neo: -

Age: Up-Up-Down

Mlig455_023360 {REF} {Length: 763} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_951} {RNA1310_38907} {RNA815_44071}

Cumulative graph for MligTC455_12887

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.237	0.777	0.99988	1.00000
RegionR2	3.766	0.777	0.20393	0.56596
RegionR3	1.268	0.777	0.45419	0.96520
RegionR4	-1.339	0.777	0.98285	1.00000
RegionR5	0.239	0.777	0.60758	0.96480
RegionR6	1.938	0.777	0.37327	0.95416
RegionR7	-0.797	0.777	0.99983	1.00000
RegionR8	-0.839	0.777	0.99994	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.064	0.777	0.99985	1.00000
RegenerationR2	0.709	0.777	0.67499	0.94713
RegenerationR3	-0.559	0.777	0.62580	0.91829
RegenerationR4	3.987	0.777	0.25898	0.70709
RegenerationR5	2.297	0.777	0.43215	0.81964
RegenerationR6	-1.393	0.777	0.58283	0.85924
RegenerationBL	-0.013	0.777	0.99986	1.00000
RegenerationTP	0.954	0.777	1.00000	1.00000

Genes with expression patterns similar to MligTC455_12887

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12887	17	0.34	Mlig455_023360	Neo: - Age: Up-Up-Down		2	-	-	-	1.000	1.000	-	Mlig455_023360 {REF} {Length: 763} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_951} {RNA1310_38907} {RNA815_44071}
2.	MligTC455_00877	8	0.18	Mlig455_018214	Neo: - Age: -		0.98	-	-	-	0.980	-	-	Mlig455_018214 {REF} {Length: 1784} {Pfam: Integrase zinc binding domain [PF17921.3, score=52.2]; H2C2 zinc finger [PF09337.12, score=23.6]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=55.5, Expect=3e-09]} {RNA1310_18657.1} {RNA815_53591}
3.	MligTC455_18189	10	0.21	Mlig455_026083	Neo: - Age: -		0.98	-	-	-	0.980	-	-	Mlig455_026083 {REF} {Length: 1571} {RNA1509_41342} {RNA1310_148712} {RNA815_60827}
4.	MligTC455_09378	94	1.95	Mlig455_035026, Mlig455_053440	Neo: - Age: -		0.978	-	-	-	0.978	-	-	Mlig455_035026 {REF} {Length: 283} {NoTransDecoderORF} {RNA1310_109437} Mlig455_053440 {REF} {Length: 501} {NoTransDecoderORF} {RNA1310_109437}
5.	MligTC455_17968	153	3.18	Mlig455_039261, Mlig455_039286	Neo: - Age: - Regeneration-downregulated R6: -5.278 Regeneration-depleted R6: -5.278		0.978	-	-	-	0.978	-	-	Mlig455_039261 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_51604} {RNA1310_20613.1} {RNA815_61527} Mlig455_039286 {REF} {Length: 324} {NoTransDecoderORF} {RNA1509_51604} {RNA1310_20613.1, RNA1509_51604} {RNA1509_51604, RNA815_61527}
6.	MligTC455_31098	35	0.73	Mlig455_025511, Mlig455_037030	Neo: - Age: Down-Up-Down		0.974	-	-	-	0.974	-	-	Mlig455_025511 {REF} {Length: 1662} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=63.5, Expect=8e-11]} {RNA1509_32396} {RNA1310_22534} {RNA815_1171.1} Mlig455_037030 {REF} {Length: 3378} {Pfam: Terpene synthase family 2, C-terminal metal binding [PF19086.2, score=18.7]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=85.5, Expect=7e-17]} {RNA1509_32396} {RNA1310_22534} {RNA815_1171.1}
7.	MligTC455_24154	248	5.18	Mlig455_040483, Mlig455_040489	Neo: Irradiation Age: -		0.973	-	-	-	0.973	-	-	Mlig455_040483 {REF} {Length: 931} {Pfam: F5/8 type C domain [PF00754.27, score=23.2]} {Smed: dd_Smed_v6_71482_0_1, dd_Smed_v6_71482_0_1, [Score=45.1, Expect=3e-06]} {RNA1509_25498} {RNA1310_35087} {RNA815_15678.1} Mlig455_040489 {REF} {Length: 920} {Pfam: F5/8 type C domain [PF00754.27, score=23.4]} {Smed: dd_Smed_v6_71482_0_1, dd_Smed_v6_71482_0_1, [Score=48.1, Expect=3e-07]} {RNA1509_25498} {RNA1310_33494} {RNA815_15678.1}
8.	MligTC455_18299	9	0.19	Mlig455_069776	Neo: - Age: -		0.958	-	-	-	0.958	-	-	Mlig455_069776 {REF} {Length: 422} {NoTransDecoderORF} {RNA1509_28510} {RNA1310_55962} {RNA815_33478}
9.	MligTC455_30018	344	7.17	Mlig455_064949	Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.361 Region-specific R4: 5.486	ABCA10	0.958	-	-	-	0.958	-	-	Mlig455_064949 {REF} {Length: 4917} {Pfam: ABC transporter [PF00005.29, score=181.2]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=74.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.6]; ABC-2 family transporter protein [PF12698.9, score=28.4]; P-loop containing region of AAA domain [PF13555.8, score=26.4]; RsgA GTPase [PF03193.18, score=25.0]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=24.3]; AAA domain [PF13476.8, score=21.7]; Domain of unknown function (DUF4162) [PF13732.8, score=20.6]; 50S ribosome-binding GTPase [PF01926.25, score=20.4]; AAA ATPase domain [PF13175.8, score=20.4]; AAA domain [PF13401.8, score=19.6]; AAA ATPase domain [PF13191.8, score=19.4]} {Human: ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=249, Expect=1e-66]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=237, Expect=1e-62]} {Mouse: ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=229, Expect=3e-60]; ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=225, Expect=6e-59]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=219, Expect=2e-57]} {Dmel: FBgn0031170, CG1718, [Score=199, Expect=4e-51]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=203, Expect=1e-52]} {Smed: dd_Smed_v6_30574_0_1, dd_Smed_v6_30574_0_1, [Score=204, Expect=3e-53]} {RNA1509_16613} {RNA1310_17476} {RNA815_12732}
10.	MligTC455_08738	150	3.12	Mlig455_044163	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.136		0.954	-	-	-	0.954	-	-	Mlig455_044163 {REF} {Length: 1945} {TRANSSPLICED} {RNA1509_20698} {RNA1310_12115, RNA1509_20698} {RNA1509_20698, RNA815_7721}
11.	MligTC455_16274	6	0.13	Mlig455_029336	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_029336 {REF} {Length: 607} {Pfam: Domain of unknown function (DUF3898) [PF13037.8, score=19.0]}

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