TomoSeq data search

Data search

Results for MligTC455_12996

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12996

162

3.38

Mlig455_018206, Mlig455_034529, Mlig455_036490, Mlig455_037541

Neo: -

Age: -

Mlig455_018206 {REF} {Length: 943} {NoTransDecoderORF} {RNA1509_58376} {RNA1310_18479.1} {RNA815_17358.1}

Mlig455_034529 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_58376} {RNA1310_18479.1} {RNA815_35714.2}

Mlig455_036490 {REF} {Length: 1232} {NoTransDecoderORF} {RNA1509_20888} {RNA1310_18479.1} {RNA815_17358.1}

Mlig455_037541 {REF} {Length: 1080} {NoTransDecoderORF} {RNA1509_21128} {RNA1310_18479.1} {RNA815_17358.1}

Cumulative graph for MligTC455_12996

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.473	2.285	0.38076	1.00000
RegionR2	1.69	2.285	0.11873	0.42673
RegionR3	-0.395	2.285	0.94846	1.00000
RegionR4	0.363	2.285	0.71349	0.99828
RegionR5	-0.685	2.285	0.97486	1.00000
RegionR6	-0.144	2.285	0.90049	1.00000
RegionR7	2.163	2.285	0.04332	0.40053
RegionR8	1.481	2.285	0.32088	0.95484

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.55	2.285	0.99995	1.00000
RegenerationR2	-0.636	2.285	0.38997	0.80843
RegenerationR3	1.589	2.285	0.08602	0.47725
RegenerationR4	1.074	2.285	0.20567	0.65228
RegenerationR5	0.968	2.285	0.27101	0.70244
RegenerationR6	2.4	2.285	0.00895	0.11631
RegenerationBL	0.1	2.285	0.92025	1.00000
RegenerationTP	0.172	2.285	0.86492	1.00000

Genes with expression patterns similar to MligTC455_12996

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12996	162	3.38	Mlig455_018206, Mlig455_034529, Mlig455_036490, Mlig455_037541	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018206 {REF} {Length: 943} {NoTransDecoderORF} {RNA1509_58376} {RNA1310_18479.1} {RNA815_17358.1} Mlig455_034529 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_58376} {RNA1310_18479.1} {RNA815_35714.2} Mlig455_036490 {REF} {Length: 1232} {NoTransDecoderORF} {RNA1509_20888} {RNA1310_18479.1} {RNA815_17358.1} Mlig455_037541 {REF} {Length: 1080} {NoTransDecoderORF} {RNA1509_21128} {RNA1310_18479.1} {RNA815_17358.1}
2.	MligTC455_50731	121	2.51	Mlig455_065010	Neo: - Age: Down-Up-Down Region-enriched R7: 3.709/0.00994	TRABD2B	1.72	0.975	-	0.745	-	-	-	Mlig455_065010 {REF} {Length: 1805} {Pfam: TraB/PrgY/gumN family [PF01963.19, score=145.5]} {Human: ENSG00000269113, TRABD2B, TraB domain containing 2B, [RH, Score=155, Expect=3e-41]; ENSG00000186854, TRABD2A, TraB domain containing 2A, [RH, Score=153, Expect=7e-42]} {Mouse: ENSMUSG00000070867, Trabd2b, TraB domain containing 2B, [RH, Score=161, Expect=1e-43]} {Celegans: WBGene00007351, C05G5.5, Metalloprotease TIKI homolog, [RH, Score=138, Expect=3e-36]} {RNA1310_36764} {RNA815_32656}
3.	MligTC455_23968	287	5.99	Mlig455_013675, Mlig455_013683, Mlig455_013692	Neo: - Age: -	TRPA1	1.704	0.971	-	-	-	-	0.733	Mlig455_013675 {REF} {Length: 3300} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=43.0]; SAP domain [PF02037.29, score=22.7]} {Smed: dd_Smed_v6_12031_0_1, dd_Smed_v6_12031_0_1, [Score=54.7, Expect=9e-08]} {RNA1509_24256} {RNA1310_16125} {RNA815_17623.2} Mlig455_013683 {REF} {Length: 4116} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=312.5]; Ankyrin repeats (many copies) [PF13637.8, score=185.9]; Ankyrin repeats (many copies) [PF13857.8, score=181.7]; Ankyrin repeat [PF00023.32, score=153.3]; Ankyrin repeat [PF13606.8, score=149.8]; Ion transport protein [PF00520.33, score=37.9]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=268, Expect=4e-74]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=252, Expect=8e-69]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=311, Expect=1e-88]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=241, Expect=2e-65]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=473, Expect=3e-149]} {RNA1509_46488} {RNA1310_4045.1} {RNA815_14390} Mlig455_013692 {REF} {Length: 4084} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=262.3]; Ankyrin repeats (many copies) [PF13637.8, score=188.5]; Ankyrin repeats (many copies) [PF13857.8, score=181.8]; Ankyrin repeat [PF13606.8, score=151.0]; Ankyrin repeat [PF00023.32, score=149.6]; Ion transport protein [PF00520.33, score=37.8]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=266, Expect=3e-73]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=250, Expect=3e-68]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=307, Expect=3e-87]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=241, Expect=3e-65]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=474, Expect=9e-150]} {RNA1509_46488} {RNA1310_4045.1, RNA1509_46488} {RNA1509_46488, RNA815_14390}
4.	MligTC455_35835	179	3.73	Mlig455_068362	Neo: - Age: -	CES4A	0.968	0.968	-	-	-	-	-	Mlig455_068362 {REF} {Length: 5670} {Pfam: Carboxylesterase family [PF00135.30, score=100.3]} {Human: ENSG00000172824, CES4A, carboxylesterase 4A, [Score=75.9, Expect=8e-14]} {Mouse: ENSMUSG00000050097, Ces2b, carboxyesterase 2B, [Score=82.0, Expect=1e-15]; ENSMUSG00000061825, Ces2c, carboxylesterase 2C, [Score=81.3, Expect=2e-15]} {Dmel: FBgn0004108, Nrt, Neurotactin, [RH, Score=107, Expect=1e-23]} {Celegans: WBGene00019477, K07C11.4, Carboxylic ester hydrolase, [Score=75.9, Expect=5e-14]} {Smed: dd_Smed_v6_4800_0_2, dd_Smed_v6_4800_0_2, [Score=56.6, Expect=4e-08]} {RNA1310_8940} {RNA815_4325.1}
5.	MligTC455_50920	189	3.94	Mlig455_037116	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_037116 {REF} {Length: 1083} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=52.0]} {RNA1509_38102} {RNA1310_27077} {RNA815_9408}
6.	MligTC455_44878	52	1.08	Mlig455_052871	Neo: - Age: -	CPN2	0.96	-	-	0.960	-	-	-	Mlig455_052871 {REF} {Length: 3541} {Pfam: Leucine rich repeat [PF13855.8, score=79.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=28.2]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=27.0]} {Human: ENSG00000178772, CPN2, carboxypeptidase N subunit 2, [Score=81.3, Expect=3e-15]; ENSG00000178732, GP5, glycoprotein V platelet, [Score=77.8, Expect=4e-14]} {Mouse: ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=93.6, Expect=3e-19]} {Dmel: FBgn0023095, caps, capricious, [Score=82.0, Expect=1e-15]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=68.9, Expect=2e-11]} {Smed: dd_Smed_v6_13247_0_1, dd_Smed_v6_13247_0_1, [Score=62.0, Expect=1e-09]} {RNA1509_52823} {RNA1310_3787, RNA1509_52823} {RNA1509_52823, RNA815_1699}
7.	MligTC455_08068	14	0.3	Mlig455_049398	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_049398 {REF} {Length: 1375} {NoTransDecoderORF} {RNA1509_51520} {RNA1310_42231} {RNA815_27203}
8.	MligTC455_41818	52	1.08	Mlig455_067797	Neo: - Age: Down-Up-Up		0.951	-	-	0.951	-	-	-	Mlig455_067797 {REF} {Length: 2072} {TRANSSPLICED} {RNA1509_26844} {RNA1310_16013.2} {RNA815_32730}
9.	MligTC455_34488	72	1.5	Mlig455_051688	Neo: - Age: -	DAG1	0.95	0.950	-	-	-	-	-	Mlig455_051688 {REF} {Length: 4571} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=47.3]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=31.6]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=61.2, Expect=1e-08]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=2e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=82.8, Expect=8e-16]} {RNA1509_57075} {RNA1310_1596.1, RNA1509_57075} {RNA1509_57075, RNA815_7113}

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