TomoSeq data search

Data search

Results for MligTC455_13124

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13124	14	0.30	Mlig455_052152	Neo: - Age: -		Mlig455_052152 {REF} {Length: 412} {NoTransDecoderORF} {RNA1509_41176} {RNA1310_46100} {RNA815_50609}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_13124

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.04	0.649	1.00000	1.00000
RegionR2	1.047	0.649	0.99960	1.00000
RegionR3	-0.373	0.649	1.00000	1.00000
RegionR4	-1.204	0.649	0.99958	1.00000
RegionR5	-0.947	0.649	0.99977	1.00000
RegionR6	-0.392	0.649	1.00000	1.00000
RegionR7	0.79	0.649	0.99997	1.00000
RegionR8	1.039	0.649	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.554	0.649	0.99964	1.00000
RegenerationR2	3.728	0.649	0.06171	0.40764
RegenerationR3	2.688	0.649	0.33402	0.75910
RegenerationR4	3.033	0.649	0.38934	0.80712
RegenerationR5	2.211	0.649	0.25086	0.68481
RegenerationR6	2.017	0.649	0.30811	0.65635
RegenerationBL	3.661	0.649	0.11801	0.40666
RegenerationTP	-0.11	0.649	0.99973	1.00000

Genes with expression patterns similar to MligTC455_13124

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13124	14	0.3	Mlig455_052152	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_052152 {REF} {Length: 412} {NoTransDecoderORF} {RNA1509_41176} {RNA1310_46100} {RNA815_50609}
2.	MligTC455_28950	25	0.52	Mlig455_009312	Neo: - Age: -		1.787	-	-	-	-	0.955	0.832	Mlig455_009312 {REF} {Length: 2343} {RNA1509_47002} {RNA1310_19138.2} {RNA815_7423}
3.	MligTC455_53883	7	0.15	Mlig455_032567	Neo: - Age: Up-Down-Up	PRIMPOL	0.976	-	-	-	-	-	0.976	Mlig455_032567 {REF} {Length: 3117} {TRANSSPLICED} {Pfam: Herpesviridae UL52/UL70 DNA primase [PF03121.17, score=40.3]} {Human: ENSG00000164306, PRIMPOL, primase and DNA directed polymerase, [Score=105, Expect=9e-24]} {Mouse: ENSMUSG00000038225, Primpol, primase and polymerase (DNA-directed), [Score=120, Expect=3e-29]} {RNA1310_43496} {RNA815_46866}
4.	MligTC455_11274	19	0.39	Mlig455_060650	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_060650 {REF} {Length: 656} {NoTransDecoderORF} {RNA1310_80809} {RNA815_48400}
5.	MligTC455_19858	8	0.17	Mlig455_033536	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_033536 {REF} {Length: 1230} {RNA1310_25040.2} {RNA815_12562.1}
6.	MligTC455_10635	35	0.74	Mlig455_004317	Neo: - Age: Up-Down-Down	FLOT1	0.964	-	-	-	-	0.964	-	Mlig455_004317 {REF} {Length: 1135} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=55.4]} {Human: ENSG00000236271, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000232280, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000206379, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000137312, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000206480, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000230143, FLOT1, flotillin 1, [Score=166, Expect=2e-52]} {Mouse: ENSMUSG00000059714, Flot1, flotillin 1, [Score=166, Expect=2e-52]} {Dmel: FBgn0024754, Flo1, Flotillin 1, [Score=178, Expect=1e-54]} {Smed: dd_Smed_v6_4656_0_2, dd_Smed_v6_4656_0_2, [Score=191, Expect=6e-60]} {RNA1310_37866} {RNA815_26762}
7.	MligTC455_12228	24	0.5	Mlig455_029966, Mlig455_051524	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_029966 {REF} {Length: 240} {NoTransDecoderORF} {RNA1310_146647} Mlig455_051524 {REF} {Length: 175} {NoTransDecoderORF}
8.	MligTC455_32994	97	2.02	Mlig455_038103	Neo: - Age: -	CFAP46	0.961	-	-	-	-	-	0.961	Mlig455_038103 {REF} {Length: 2310} {Human: ENSG00000171811, CFAP46, cilia and flagella associated protein 46, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000049571, Cfap46, cilia and flagella associated protein 46, [Score=168, Expect=1e-43]} {Smed: dd_Smed_v6_14103_0_1, dd_Smed_v6_14103_0_1, [Score=157, Expect=3e-40]} {RNA1509_22612} {RNA1310_312.1} {RNA815_3411}
9.	MligTC455_10899	46	0.95	Mlig455_013784, Mlig455_013915	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_013784 {REF} {Length: 1362} {Pfam: Glycine rich protein [PF12810.9, score=20.8]} {RNA1509_28715} {RNA1310_91773} {RNA815_35307} Mlig455_013915 {REF} {Length: 1516} {Pfam: Glycine rich protein [PF12810.9, score=20.3]} {RNA1509_28715} {RNA1310_91773} {RNA815_35307}
10.	MligTC455_15184	33	0.69	Mlig455_065087	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_065087 {REF} {Length: 2555} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=183.3]} {Mouse: ENSMUSG00000030340, Scnn1a, sodium channel, nonvoltage-gated 1 alpha, [Score=48.5, Expect=1e-05]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=68.2, Expect=1e-11]} {Smed: dd_Smed_v6_37545_0_1, dd_Smed_v6_37545_0_1, [RH, Score=125, Expect=3e-30]} {RNA1310_11413} {RNA815_11497}
11.	MligTC455_40687	28	0.58	Mlig455_040563, Mlig455_062078	Neo: - Age: -	PDE1C	0.959	-	-	-	-	-	0.959	Mlig455_040563 {REF} {Length: 1798} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.1]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.0]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=362, Expect=2e-117]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=358, Expect=2e-117]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=362, Expect=5e-118]; ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=362, Expect=7e-120]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=346, Expect=4e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_21546_0_1, dd_Smed_v6_21546_0_1, [Score=396, Expect=7e-133]} {RNA1310_80402} Mlig455_062078 {REF} {Length: 1807} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.6]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.1]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=356, Expect=3e-115]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=355, Expect=5e-116]} {Mouse: ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=359, Expect=1e-118]; ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=356, Expect=8e-116]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=347, Expect=2e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_26758_0_1, dd_Smed_v6_26758_0_1, [Score=394, Expect=3e-132]} {RNA1509_46211} {RNA1310_80402} {RNA815_55704}
12.	MligTC455_01881	8	0.17	Mlig455_032639	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_032639 {REF} {Length: 810} {TRANSSPLICED} {NoTransDecoderORF}
13.	MligTC455_16844	22	0.47	Mlig455_032383	Neo: - Age: -	NPY1R	0.956	-	-	-	-	-	0.956	Mlig455_032383 {REF} {Length: 1642} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=126.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.7]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=111, Expect=2e-26]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=110, Expect=3e-26]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=108, Expect=1e-25]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=152, Expect=8e-41]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=135, Expect=4e-35]} {Smed: dd_Smed_v6_17752_0_1, dd_Smed_v6_17752_0_1, [Score=216, Expect=3e-65]} {RNA1310_56955}
14.	MligTC455_16292	176	3.67	Mlig455_029213	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.543 Region-enriched R2: 3.505/0.04173	PRKAR2B	0.953	-	-	-	-	-	0.953	Mlig455_029213 {REF} {Length: 1890} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=75.9]} {Human: ENSG00000005249, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=51.6, Expect=1e-06]; ENSG00000284096, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=51.6, Expect=1e-06]} {Mouse: ENSMUSG00000002997, Prkar2b, protein kinase, cAMP dependent regulatory, type II beta, [Score=51.2, Expect=1e-06]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=52.8, Expect=2e-07]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=104, Expect=2e-24]} {RNA1509_14151} {RNA1310_17181} {RNA815_7262}
15.	MligTC455_38740	49	1.02	Mlig455_014973	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_014973 {REF} {Length: 1732} {RNA1509_14379} {RNA1310_52607} {RNA815_11562.1}
16.	MligTC455_52482	22	0.46	Mlig455_042671	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_042671 {REF} {Length: 2390} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=150.1]} {Smed: dd_Smed_v6_31771_0_1, dd_Smed_v6_31771_0_1, [Score=71.2, Expect=6e-13]} {RNA1310_47540} {RNA815_16144}
17.	MligTC455_15282	31	0.65	Mlig455_003602, Mlig455_041578	Neo: - Age: -	ASIC3	0.951	-	-	-	-	0.951	-	Mlig455_003602 {REF} {Length: 2509} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=209.5]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=68.6, Expect=3e-11]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=79.3, Expect=7e-15]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [Score=68.6, Expect=6e-12]} {RNA1509_55009} {RNA1310_54440} {RNA815_29220} Mlig455_041578 {REF} {Length: 3160} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=209.6]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=68.6, Expect=3e-11]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=79.3, Expect=7e-15]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [Score=68.9, Expect=6e-12]} {RNA1509_55009} {RNA1310_54440} {RNA815_29220}
18.	MligTC455_18499	24	0.5	Mlig455_012628	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_012628 {REF} {Length: 1340} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=60.5, Expect=1e-10]} {RNA1310_107419} {RNA815_46554}
19.	MligTC455_49862	26	0.54	Mlig455_019435	Neo: - Age: -	SHOX2	0.951	-	-	-	-	-	0.951	Mlig455_019435 {REF} {Length: 904} {Pfam: Homeodomain [PF00046.31, score=84.8]; Homeobox KN domain [PF05920.13, score=23.6]} {Human: ENSG00000168779, SHOX2, short stature homeobox 2, [Score=89.0, Expect=4e-22]; ENSG00000185960, SHOX, short stature homeobox, [Score=87.0, Expect=5e-21]} {Mouse: ENSMUSG00000027833, Shox2, short stature homeobox 2, [Score=89.0, Expect=3e-22]} {Dmel: FBgn0085396, CG34367, [Score=89.7, Expect=9e-22]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [Score=83.6, Expect=5e-20]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [Score=86.3, Expect=2e-20]} {RNA1310_51707} {RNA815_41055}
20.	MligTC455_11635	21	0.43	Mlig455_033293	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_033293 {REF} {Length: 2811} {RNA1509_56255} {RNA1310_121560} {RNA815_22311}
21.	MligTC455_55152	8	0.17	Mlig455_027204	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_027204 {REF} {Length: 175} {NoTransDecoderORF}