Data search


search
Exact
Search

Results for MligTC455_13188

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13188 42 0.88 Mlig455_052174

Neo: -

Age: -

Mlig455_052174 {REF} {Length: 422} {NoTransDecoderORF} {RNA1310_44921} {RNA815_15806}

Cumulative graph for MligTC455_13188

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.587 1.184 1.00000 1.00000
RegionR2 -3.819 1.184 0.99977 1.00000
RegionR3 -0.875 1.184 0.98317 1.00000
RegionR4 6.269 1.184 1.00000 1.00000
RegionR5 3.637 1.184 0.01725 0.08694
RegionR6 0.839 1.184 0.46791 1.00000
RegionR7 2.359 1.184 0.12380 0.66301
RegionR8 -2.824 1.184 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.642 1.184 1.00000 1.00000
RegenerationR2 0.555 1.184 0.72268 0.96318
RegenerationR3 -1.849 1.184 0.65264 0.93001
RegenerationR4 -2.391 1.184 0.76060 0.97303
RegenerationR5 -2.619 1.184 0.17538 0.60454
RegenerationR6 -2.901 1.184 0.14035 0.45884
RegenerationBL -1.936 1.184 0.99845 1.00000
RegenerationTP -1.095 1.184 0.99276 1.00000


Genes with expression patterns similar to MligTC455_13188

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13188 42 0.88 Mlig455_052174

Neo: -

Age: -

3 - - 1.000 1.000 - 1.000 Mlig455_052174 {REF} {Length: 422} {NoTransDecoderORF} {RNA1310_44921} {RNA815_15806}
2. MligTC455_37541 18 0.37 Mlig455_059006

Neo: -

Age: -

0.966 - - - - - 0.966 Mlig455_059006 {REF} {Length: 1614} {NoTransDecoderORF} {RNA1310_43655} {RNA815_48197}
3. MligTC455_41173 89 1.85 Mlig455_012423

Neo: -

Age: -

0.963 - - - - - 0.963 Mlig455_012423 {REF} {Length: 2142} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.2]} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
4. MligTC455_30918 124 2.58 Mlig455_027723, Mlig455_027930

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.367

ANGPTL1, STK36 0.959 - - - - - 0.959

Mlig455_027723 {REF} {Length: 2139} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=79.3]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=67.0, Expect=2e-11]; ENSG00000132855, ANGPTL3, angiopoietin like 3, [Score=64.7, Expect=9e-11]; ENSG00000120332, TNN, tenascin N, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000033327, Tnxb, tenascin XB, [Score=66.6, Expect=3e-11]} {Dmel: FBgn0031804, CG9500, [Score=80.5, Expect=1e-16]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=61.6, Expect=3e-10]} {RNA1509_53291} {RNA1310_21728} {RNA815_9881}

Mlig455_027930 {REF} {Length: 3679} {Pfam: Protein kinase domain [PF00069.27, score=93.2]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=76.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.3]; Ankyrin repeats (3 copies) [PF12796.9, score=68.1]; Ankyrin repeat [PF13606.8, score=42.1]; Ankyrin repeats (many copies) [PF13637.8, score=39.6]; Ankyrin repeats (many copies) [PF13857.8, score=39.3]; Ankyrin repeat [PF00023.32, score=32.9]; ABC1 atypical kinase-like domain [PF03109.18, score=20.3]} {Human: ENSG00000163482, STK36, serine/threonine kinase 36, [Score=71.2, Expect=8e-12]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=70.9, Expect=1e-11]; ENSG00000126562, WNK4, WNK lysine deficient protein kinase 4, [Score=70.5, Expect=7e-12]; ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=68.9, Expect=4e-11]} {Mouse: ENSMUSG00000025758, Plk4, polo like kinase 4, [Score=72.0, Expect=2e-12]; ENSMUSG00000116326, Plk4, polo like kinase 4, [Score=72.0, Expect=2e-12]; ENSMUSG00000035112, Wnk4, WNK lysine deficient protein kinase 4, [Score=70.5, Expect=8e-12]; ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=70.1, Expect=1e-11]} {Dmel: FBgn0031804, CG9500, [Score=81.3, Expect=2e-16]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=77.0, Expect=5e-14]} {Smed: dd_Smed_v6_5138_0_2, dd_Smed_v6_5138_0_2, [Score=77.8, Expect=2e-14]} {RNA1509_26758} {RNA1310_21728} {RNA815_9881}
5. MligTC455_31840 149 3.11 Mlig455_015884

Neo: -

Age: -

0.957 - - - 0.957 - - Mlig455_015884 {REF} {Length: 3104} {RNA1509_19124} {RNA1310_1002.1} {RNA815_889}
6. MligTC455_07617 64 1.34 Mlig455_005418

Neo: -

Age: -

0.955 - - - 0.955 - - Mlig455_005418 {REF} {Length: 276} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23004} {RNA1310_2481} {RNA815_1756}
7. MligTC455_16476 126 2.63 Mlig455_042936

Neo: -

Age: -

Region-enriched R2: 3.045/0.04509

0.953 - - - - - 0.953 Mlig455_042936 {REF} {Length: 2571} {Pfam: Innexin [PF00876.20, score=347.0]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=102, Expect=9e-24]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=280, Expect=3e-91]} {Smed: dd_Smed_v6_10567_0_1, dd_Smed_v6_10567_0_1, [RH, Score=498, Expect=8e-177]} {RNA1509_13614} {RNA1310_14284} {RNA815_5221}
8. MligTC455_12147 545 11.35 Mlig455_004946, Mlig455_019710

Neo: -

Age: Up-Down-Down

0.951 - - - 0.951 - -

Mlig455_004946 {REF} {Length: 2666} {RNA1509_18139} {RNA1310_48040} {RNA815_12955}

Mlig455_019710 {REF} {Length: 2716} {RNA1509_18139} {RNA1310_48040} {RNA815_12955}
9. MligTC455_41474 104 2.16 Mlig455_014812

Neo: -

Age: -

DNAJC27 0.95 - - - - - 0.950 Mlig455_014812 {REF} {Length: 5391} {Pfam: Ras family [PF00071.24, score=116.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=58.4]; ADP-ribosylation factor family [PF00025.23, score=41.9]; 50S ribosome-binding GTPase [PF01926.25, score=24.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=20.3]} {Human: ENSG00000115137, DNAJC27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=5e-29]} {Mouse: ENSMUSG00000020657, Dnajc27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=3e-29]; ENSMUSG00000027935, Rab13, RAB13, member RAS oncogene family, [Score=108, Expect=4e-29]} {Dmel: FBgn0029959, Rab39, [Score=98.2, Expect=3e-25]} {Celegans: WBGene00004279, rab-21, RAB family, [Score=93.6, Expect=1e-23]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=112, Expect=5e-31]} {RNA1509_34577} {RNA1310_27449.1, RNA1509_34577} {RNA1509_34577, RNA815_21008}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA