TomoSeq data search

Data search

Results for MligTC455_13203

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_13203

121

2.52

Mlig455_003059

Neo: -

Age: Up-Down-Up

Mlig455_003059 {REF} {Length: 2564} {RNA1509_44401} {RNA1310_33526.2} {RNA815_19890.1}

Cumulative graph for MligTC455_13203

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.439	2.024	0.38225	1.00000
RegionR2	0.066	2.024	0.83883	1.00000
RegionR3	0.735	2.024	0.42815	0.94902
RegionR4	0.01	2.024	0.84961	1.00000
RegionR5	0.025	2.024	0.84132	1.00000
RegionR6	0.518	2.024	0.58722	1.00000
RegionR7	1.806	2.024	0.05284	0.44159
RegionR8	1.278	2.024	0.27654	0.90073

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.132	2.024	0.99998	1.00000
RegenerationR2	-1.306	2.024	0.06368	0.41326
RegenerationR3	-1.407	2.024	0.05536	0.40441
RegenerationR4	-0.939	2.024	0.24957	0.69799
RegenerationR5	-1.395	2.024	0.05234	0.36850
RegenerationR6	-2.617	2.024	0.00522	0.08709
RegenerationBL	-1.459	2.024	0.16102	0.48124
RegenerationTP	-1.305	2.024	0.15259	0.57801

Genes with expression patterns similar to MligTC455_13203

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13203	121	2.52	Mlig455_003059	Neo: - Age: Up-Down-Up		5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_003059 {REF} {Length: 2564} {RNA1509_44401} {RNA1310_33526.2} {RNA815_19890.1}
2.	MligTC455_15265	43	0.9	Mlig455_043121	Neo: - Age: -		1.71	0.737	-	-	-	0.973	-	Mlig455_043121 {REF} {Length: 2546} {RNA1509_34057} {RNA1310_70970} {RNA815_35302}
3.	MligTC455_45987	1592	33.17	Mlig455_024379, Mlig455_024495	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.664 Region-specific R8: 3.405 Region-enriched R8: 3.716/0.00000 Region-enriched R7: 2.383/0.00000 Regeneration-depleted BL: -2.612 Regeneration-depleted TP: -2.566	PKDREJ	1.705	0.744	-	-	-	-	0.961	Mlig455_024379 {REF} {Length: 9101} {Pfam: PKD domain [PF18911.2, score=34.9]; PKD domain [PF00801.22, score=21.5]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58} Mlig455_024495 {REF} {Length: 8484} {Pfam: Polycystin cation channel [PF08016.14, score=333.9]; PLAT/LH2 domain [PF01477.25, score=69.5]; PKD domain [PF18911.2, score=32.8]; Ion transport protein [PF00520.33, score=31.6]; PKD domain [PF00801.22, score=19.8]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [RH, Score=346, Expect=8e-95]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [RH, Score=327, Expect=4e-89]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [RH, Score=319, Expect=7e-87]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=167, Expect=3e-41]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=198, Expect=3e-52]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=592, Expect=9e-172]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58}
4.	MligTC455_05283	200	4.17	Mlig455_034021, Mlig455_060399	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.841 Region-enriched R7: 2.636/0.00077 Regeneration-downregulated BL: -7.376 Regeneration-depleted BL: -7.376		0.968	-	-	-	-	-	0.968	Mlig455_034021 {REF} {Length: 1260} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=63.7]} {RNA1310_41325} {RNA815_53338} Mlig455_060399 {REF} {Length: 2102} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=63.8]} {RNA1509_57769} {RNA1310_41325} {RNA815_53338}
5.	MligTC455_20689	194	4.05	Mlig455_055601	Neo: - Age: logFC(26M/2M)=-0.995	TMEM145	0.967	-	-	-	-	0.967	-	Mlig455_055601 {REF} {Length: 3738} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=161.0]} {Human: ENSG00000167619, TMEM145, transmembrane protein 145, [RH, Score=243, Expect=9e-73]} {Mouse: ENSMUSG00000043843, Tmem145, transmembrane protein 145, [RH, Score=278, Expect=2e-85]} {Dmel: FBgn0034674, CG9304, [Score=67.4, Expect=2e-11]} {Celegans: WBGene00007595, C15A7.2, [RH, Score=203, Expect=4e-58]} {RNA1509_2722} {RNA1310_10889.1, RNA1509_2722} {RNA1509_2722, RNA815_2731}
6.	MligTC455_50150	353	7.35	Mlig455_027839, Mlig455_060010	Neo: - Age: -	TTPA	0.966	-	-	-	-	-	0.966	Mlig455_027839 {REF} {Length: 1390} {Pfam: CRAL/TRIO domain [PF00650.22, score=83.4]} {Human: ENSG00000137561, TTPA, alpha tocopherol transfer protein, [Score=92.0, Expect=2e-21]; ENSG00000124120, TTPAL, alpha tocopherol transfer protein like, [Score=89.4, Expect=5e-20]} {Mouse: ENSMUSG00000017679, Ttpal, tocopherol (alpha) transfer protein-like, [Score=88.2, Expect=8e-20]; ENSMUSG00000073988, Ttpa, tocopherol (alpha) transfer protein, [Score=85.9, Expect=3e-19]} {Dmel: FBgn0053966, CG33966, [Score=101, Expect=4e-25]} {Smed: dd_Smed_v6_2760_0_1, dd_Smed_v6_2760_0_1, [Score=123, Expect=2e-33]} {RNA1509_54585} {RNA1310_9254} {RNA815_16560} Mlig455_060010 {REF} {Length: 1480} {Pfam: CRAL/TRIO domain [PF00650.22, score=83.4]} {Human: ENSG00000137561, TTPA, alpha tocopherol transfer protein, [Score=92.0, Expect=2e-21]; ENSG00000124120, TTPAL, alpha tocopherol transfer protein like, [Score=89.4, Expect=5e-20]} {Mouse: ENSMUSG00000017679, Ttpal, tocopherol (alpha) transfer protein-like, [Score=88.2, Expect=8e-20]; ENSMUSG00000073988, Ttpa, tocopherol (alpha) transfer protein, [Score=85.9, Expect=3e-19]} {Dmel: FBgn0053966, CG33966, [Score=101, Expect=4e-25]} {Smed: dd_Smed_v6_2760_0_1, dd_Smed_v6_2760_0_1, [Score=123, Expect=2e-33]} {RNA1509_54585} {RNA1310_9254} {RNA815_16560}
7.	MligTC455_44503	114	2.37	Mlig455_022220	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_022220 {REF} {Length: 3854} {Pfam: Innexin [PF00876.20, score=328.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.1]} {Dmel: FBgn0024177, zpg, zero population growth, [Score=90.1, Expect=2e-19]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=261, Expect=2e-82]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=280, Expect=2e-89]} {RNA1509_58318} {RNA1310_12574.1} {RNA815_26857}

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