TomoSeq data search

Data search

Results for MligTC455_13314

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_13314

106

2.20

Mlig455_018492

Neo: -

Age: -

Mlig455_018492 {REF} {Length: 2523} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=34.0]; Prokaryotic RING finger family 4 [PF14447.8, score=22.2]} {Smed: dd_Smed_v6_2453_0_2, dd_Smed_v6_2453_0_2, [RH, Score=49.3, Expect=7e-08]} {RNA1509_9484} {RNA1310_32457} {RNA815_12966.1}

Cumulative graph for MligTC455_13314

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.234	2.062	1.00000	1.00000
RegionR2	-0.418	2.062	0.85620	1.00000
RegionR3	2.28	2.062	0.03538	0.32636
RegionR4	3.126	2.062	0.01850	0.09646
RegionR5	1.283	2.062	0.27793	0.60509
RegionR6	0.957	2.062	0.42117	0.98804
RegionR7	2.151	2.062	0.08444	0.55976
RegionR8	-5.146	2.062	0.99960	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.055	2.062	1.00000	1.00000
RegenerationR2	0.359	2.062	0.69318	0.95400
RegenerationR3	-1.805	2.062	0.04502	0.37062
RegenerationR4	-1.17	2.062	0.24045	0.68900
RegenerationR5	-0.719	2.062	0.43660	0.82242
RegenerationR6	0.014	2.062	0.98867	1.00000
RegenerationBL	-3.976	2.062	0.99987	1.00000
RegenerationTP	0.828	2.062	0.64605	0.98675

Genes with expression patterns similar to MligTC455_13314

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13314	106	2.2	Mlig455_018492	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018492 {REF} {Length: 2523} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=34.0]; Prokaryotic RING finger family 4 [PF14447.8, score=22.2]} {Smed: dd_Smed_v6_2453_0_2, dd_Smed_v6_2453_0_2, [RH, Score=49.3, Expect=7e-08]} {RNA1509_9484} {RNA1310_32457} {RNA815_12966.1}
2.	MligTC455_03767	202	4.21	Mlig455_046003	Neo: - Age: -	UBE2D2	0.978	-	-	-	-	0.978	-	Mlig455_046003 {REF} {Length: 2061} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=121.5]} {Human: ENSG00000131508, UBE2D2, ubiquitin conjugating enzyme E2 D2, [Score=128, Expect=2e-35]; ENSG00000109332, UBE2D3, ubiquitin conjugating enzyme E2 D3, [Score=128, Expect=2e-35]; ENSG00000078967, UBE2D4, ubiquitin conjugating enzyme E2 D4 (putative), [Score=126, Expect=9e-35]; ENSG00000072401, UBE2D1, ubiquitin conjugating enzyme E2 D1, [Score=125, Expect=3e-34]} {Mouse: ENSMUSG00000063447, Ube2d2b, ubiquitin-conjugating enzyme E2D 2B, [Score=132, Expect=5e-37]; ENSMUSG00000050435, Ube2dnl1, ubiquitin-conjugating enzyme E2D N-terminal like 1, [Score=129, Expect=8e-36]; ENSMUSG00000078578, Ube2d3, ubiquitin-conjugating enzyme E2D 3, [Score=128, Expect=1e-35]; ENSMUSG00000091896, Ube2d2a, ubiquitin-conjugating enzyme E2D 2A, [Score=128, Expect=1e-35]} {Dmel: FBgn0027609, morgue, modifier of rpr and grim, ubiquitously expressed, [RH, Score=208, Expect=1e-62]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=129, Expect=3e-36]} {Smed: dd_Smed_v6_6773_0_1, dd_Smed_v6_6773_0_1, [RH, Score=259, Expect=1e-83]} {RNA1509_28712} {RNA1310_23681.1} {RNA815_24202}
3.	MligTC455_33336	66	1.37	Mlig455_036910	Neo: - Age: -		0.971	-	-	-	-	-	0.971	Mlig455_036910 {REF} {Length: 2316} {Pfam: Innexin [PF00876.20, score=307.3]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=95.5, Expect=3e-21]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=216, Expect=2e-65]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=306, Expect=1e-99]} {RNA1509_36671} {RNA1310_14554, RNA1509_36671} {RNA1509_36671, RNA815_16793}
4.	MligTC455_41431	47	0.98	Mlig455_006202	Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 4.927/0.04615	LSM3	0.956	-	-	-	-	0.956	-	Mlig455_006202 {REF} {Length: 715} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.8]} {Human: ENSG00000170860, LSM3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=4e-49]} {Mouse: ENSMUSG00000034192, Lsm3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=3e-49]} {Dmel: FBgn0051184, LSm3, Like Sm 3, [RH, Score=154, Expect=4e-50]} {Celegans: WBGene00003077, lsm-3, LSM Sm-like protein, [RH, Score=143, Expect=8e-46]} {Smed: dd_Smed_v6_1641_0_1, dd_Smed_v6_1641_0_1, [RH, Score=144, Expect=4e-46]} {RNA1509_24120} {RNA1310_36385} {RNA815_14268.3}
5.	MligTC455_53931	61	1.27	Mlig455_058086	Neo: - Age: - Region-enriched R1: 12.708/0.03767 Region-enriched R4: 6.554/0.00071		0.952	-	-	-	0.952	-	-	Mlig455_058086 {REF} {Length: 1694} {RNA1509_58937} {RNA1310_36718} {RNA815_16626}
6.	MligTC455_36776	282	5.87	Mlig455_065722	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.615 Region-enriched R6: 6.284/0.00000 Region-enriched R2: 5.336/0.00441		0.95	-	-	-	-	0.950	-	Mlig455_065722 {REF} {Length: 907} {RNA1509_48740} {RNA1310_54738.2, RNA1509_48740} {RNA1509_48740, RNA815_27047}

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