Data search
Results for MligTC455_13453
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13453 | 47 | 0.97 | Mlig455_053985 | Neo: - Age: - |
Mlig455_053985 {REF} {Length: 2236} {NoTransDecoderORF} {RNA1509_32843} {RNA1310_44806} |
Cumulative graph for MligTC455_13453
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.952 | 1.139 | 0.99997 | 1.00000 | |
| RegionR2 | 1.878 | 1.139 | 0.99999 | 1.00000 | |
| RegionR3 | 0.832 | 1.139 | 1.00000 | 1.00000 | |
| RegionR4 | -1.24 | 1.139 | 0.99991 | 1.00000 | |
| RegionR5 | 0.332 | 1.139 | 0.99999 | 1.00000 | |
| RegionR6 | 0.814 | 1.139 | 0.99998 | 1.00000 | |
| RegionR7 | 0.461 | 1.139 | 0.99998 | 1.00000 | |
| RegionR8 | -0.125 | 1.139 | 0.99998 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.849 | 1.139 | 0.99999 | 1.00000 | |
| RegenerationR2 | 3.942 | 1.139 | 0.00417 | 0.09948 | |
| RegenerationR3 | 4.945 | 1.139 | 0.00498 | 0.12701 | |
| RegenerationR4 | 5.692 | 1.139 | 0.00023 | 0.01281 | |
| RegenerationR5 | 4.762 | 1.139 | 0.00074 | 0.04521 | |
| RegenerationR6 | 4.642 | 1.139 | 0.01208 | 0.13501 | |
| RegenerationBL | 3.975 | 1.139 | 0.07521 | 0.32042 | |
| RegenerationTP | 5.782 | 1.139 | 0.01500 | 0.20980 |
Genes with expression patterns similar to MligTC455_13453
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13453 | 47 | 0.97 | Mlig455_053985 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_053985 {REF} {Length: 2236} {NoTransDecoderORF} {RNA1509_32843} {RNA1310_44806} | |
| 2. | MligTC455_07119 | 20 | 0.41 | Mlig455_011074 | Neo: Irradiation Age: - |
TONSL | 1.856 | - | - | - | - | 0.893 | 0.963 | Mlig455_011074 {REF} {Length: 3533} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=65.1]; Ankyrin repeats (many copies) [PF13637.8, score=62.1]; Ankyrin repeat [PF13606.8, score=48.9]; Ankyrin repeats (many copies) [PF13857.8, score=41.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=37.9]; Ankyrin repeat [PF00023.32, score=37.7]; Leucine rich repeat [PF13855.8, score=27.2]; Leucine Rich repeat [PF13516.8, score=23.6]; Leucine Rich Repeat [PF00560.35, score=19.6]} {Human: ENSG00000285453, TONSL, tonsoku like, DNA repair protein, [RH, Score=93.6, Expect=1e-18]; ENSG00000160949, TONSL, tonsoku like, DNA repair protein, [RH, Score=93.6, Expect=1e-18]} {Mouse: ENSMUSG00000059323, Tonsl, tonsoku-like, DNA repair protein, [RH, Score=95.5, Expect=2e-19]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=61.2, Expect=5e-09]} {Celegans: WBGene00012704, mlt-3, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_15557_0_1, dd_Smed_v6_15557_0_1, [RH, Score=107, Expect=2e-23]} {RNA1509_10811} {RNA1310_6851, RNA1509_10811} {RNA1509_10811, RNA815_7512} |
| 3. | MligTC455_46172 | 176 | 3.67 | Mlig455_023716 | Neo: - Age: - Regeneration-upregulated R6: 2.559 Regeneration-enriched R6: 2.559 |
PRMT6 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_023716 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=25.1]; Methyltransferase domain [PF13649.8, score=24.9]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=18.1]} {Human: ENSG00000198890, PRMT6, protein arginine methyltransferase 6, [Score=163, Expect=6e-46]; ENSG00000111218, PRMT8, protein arginine methyltransferase 8, [Score=161, Expect=7e-45]; ENSG00000126457, PRMT1, protein arginine methyltransferase 1, [Score=155, Expect=3e-43]} {Mouse: ENSMUSG00000049300, Prmt6, protein arginine N-methyltransferase 6, [Score=167, Expect=1e-47]; ENSMUSG00000030350, Prmt8, protein arginine N-methyltransferase 8, [Score=160, Expect=9e-45]} {Dmel: FBgn0032329, Art8, Arginine methyltransferase 8, [RH, Score=178, Expect=3e-52]} {Celegans: WBGene00013766, prmt-1, Protein arginine N-methyltransferase 1, [Score=166, Expect=1e-47]} {Smed: dd_Smed_v6_1336_0_1, dd_Smed_v6_1336_0_1, [RH, Score=169, Expect=8e-49]} {RNA1509_29301, RNA1509_46260} {RNA1310_23363, RNA1509_29301, RNA1509_46260} {RNA1509_29301, RNA1509_46260, RNA815_9977} |
| 4. | MligTC455_41455 | 27 | 0.56 | Mlig455_041281 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_041281 {REF} {Length: 751} {NoTransDecoderORF} | |
| 5. | MligTC455_31888 | 153 | 3.19 | Mlig455_019662, Mlig455_024517, Mlig455_031442, Mlig455_033592, Mlig455_053219, Mlig455_067079 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | - | - | 0.952 | Mlig455_019662 {REF} {Length: 600} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=20.2]} {RNA1509_28268} {RNA1310_1293.1} {RNA815_1077} Mlig455_024517 {REF} {Length: 1758} {TRANSSPLICED} {RNA1509_37997} {RNA1310_25701.2} {RNA815_1077} Mlig455_031442 {REF} {Length: 1519} {TRANSSPLICED} {RNA1509_2283} {RNA1310_1293.1} {RNA815_1077} Mlig455_033592 {REF} {Length: 1488} {TRANSSPLICED} {RNA1509_28268} {RNA1310_1293.1} {RNA815_1077} Mlig455_053219 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_13363} {RNA1310_1293.1} {RNA815_1077} Mlig455_067079 {REF} {Length: 599} {TRANSSPLICED} {RNA1509_28268} {RNA1310_1293.1} {RNA815_1077} |
|
| 6. | MligTC455_31892 | 54 | 1.13 | Mlig455_070945 | Neo: - Age: Down-Up-Down |
0.95 | - | - | - | - | - | 0.950 | Mlig455_070945 {REF} {Length: 5239} {TRANSSPLICED} {RNA1509_47605} {RNA1310_622.1} {RNA815_2514.1} |
Berezikov Lab - 2020-2021 © ERIBA