Data search


search
Exact
Search

Results for MligTC455_13457

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13457 42 0.87 Mlig455_010584

Neo: -

Age: -

Mlig455_010584 {REF} {Length: 2583} {RNA1310_31741.1} {RNA815_57338}

Cumulative graph for MligTC455_13457

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.924 1.215 1.00000 1.00000
RegionR2 2.624 1.215 0.12952 0.44658
RegionR3 1.285 1.215 0.33993 0.87668
RegionR4 -0.639 1.215 0.89921 1.00000
RegionR5 0.183 1.215 0.73562 1.00000
RegionR6 1.506 1.215 0.29048 0.88215
RegionR7 0.681 1.215 0.66444 1.00000
RegionR8 -2.716 1.215 0.99975 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.93 1.215 0.99989 1.00000
RegenerationR2 1.368 1.215 0.13959 0.56886
RegenerationR3 1.247 1.215 0.30518 0.73628
RegenerationR4 1.458 1.215 0.33763 0.77014
RegenerationR5 1.462 1.215 0.17676 0.60653
RegenerationR6 1.886 1.215 0.10192 0.39528
RegenerationBL 4.079 1.215 0.01537 0.13076
RegenerationTP -0.671 1.215 1.00000 1.00000


Genes with expression patterns similar to MligTC455_13457

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13457 42 0.87 Mlig455_010584

Neo: -

Age: -

4 1.000 - - 1.000 1.000 1.000 Mlig455_010584 {REF} {Length: 2583} {RNA1310_31741.1} {RNA815_57338}
2. MligTC455_10547 28 0.59 Mlig455_033470

Neo: -

Age: -

PBX4 1.831 - - - 0.863 0.968 - Mlig455_033470 {REF} {Length: 2410} {Pfam: Homeodomain [PF00046.31, score=45.7]; Homeobox KN domain [PF05920.13, score=45.3]} {Human: ENSG00000105717, PBX4, PBX homeobox 4, [Score=53.5, Expect=4e-07]; ENSG00000237344, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000206315, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000224952, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000204304, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000232005, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000236353, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000225987, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000185630, PBX1, PBX homeobox 1, [Score=51.2, Expect=2e-06]} {Mouse: ENSMUSG00000034673, Pbx2, pre B cell leukemia homeobox 2, [Score=51.6, Expect=1e-06]; ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [Score=51.2, Expect=1e-06]; ENSMUSG00000100133, Tgif2lx1, TGFB-induced factor homeobox 2-like, X-linked 1, [Score=49.7, Expect=2e-06]; ENSMUSG00000100194, Tgif2lx2, TGFB-induced factor homeobox 2-like, X-linked 2, [Score=49.7, Expect=2e-06]} {Dmel: FBgn0031232, CG11617, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00000461, ceh-40, Homeobox protein ceh-40, [Score=53.5, Expect=1e-07]} {Smed: dd_Smed_v6_7324_0_1, dd_Smed_v6_7324_0_1, [RH, Score=89.0, Expect=4e-19]} {RNA1509_55011} {RNA1310_39435} {RNA815_20886}
3. MligTC455_12102 59 1.23 Mlig455_041538, Mlig455_053099

Neo: -

Age: -

Region-enriched R2: 6.626/0.00371

DEGS2 1.783 0.833 - - - 0.950 -

Mlig455_041538 {REF} {Length: 1966} {Pfam: Fatty acid desaturase [PF00487.26, score=87.9]; Sphingolipid Delta4-desaturase (DES) [PF08557.12, score=57.6]} {Human: ENSG00000168350, DEGS2, delta 4-desaturase, sphingolipid 2, [Score=319, Expect=2e-107]; ENSG00000143753, DEGS1, delta 4-desaturase, sphingolipid 1, [Score=315, Expect=5e-106]} {Mouse: ENSMUSG00000038633, Degs1, delta(4)-desaturase, sphingolipid 1, [Score=308, Expect=2e-103]; ENSMUSG00000021263, Degs2, delta(4)-desaturase, sphingolipid 2, [Score=307, Expect=6e-103]} {Dmel: FBgn0001941, ifc, infertile crescent, [Score=345, Expect=5e-118]} {Celegans: WBGene00017996, F33D4.4, Putative sphingolipid delta(4)-desaturase, [Score=318, Expect=4e-107]} {Smed: dd_Smed_v6_7414_0_1, dd_Smed_v6_7414_0_1, [RH, Score=409, Expect=7e-143]} {RNA1310_20672.2} {RNA815_19986}

Mlig455_053099 {REF} {Length: 2009} {Pfam: Fatty acid desaturase [PF00487.26, score=87.9]; Sphingolipid Delta4-desaturase (DES) [PF08557.12, score=57.5]} {Human: ENSG00000168350, DEGS2, delta 4-desaturase, sphingolipid 2, [Score=319, Expect=2e-107]; ENSG00000143753, DEGS1, delta 4-desaturase, sphingolipid 1, [Score=315, Expect=4e-106]} {Mouse: ENSMUSG00000038633, Degs1, delta(4)-desaturase, sphingolipid 1, [Score=309, Expect=7e-104]; ENSMUSG00000021263, Degs2, delta(4)-desaturase, sphingolipid 2, [Score=307, Expect=5e-103]} {Dmel: FBgn0001941, ifc, infertile crescent, [Score=345, Expect=4e-118]} {Celegans: WBGene00017996, F33D4.4, Putative sphingolipid delta(4)-desaturase, [Score=318, Expect=3e-107]} {Smed: dd_Smed_v6_7414_0_1, dd_Smed_v6_7414_0_1, [RH, Score=409, Expect=4e-143]} {RNA1310_20672.1} {RNA815_19986}
4. MligTC455_07673 12 0.24 Mlig455_029000

Neo: -

Age: -

0.99 - - - - 0.990 - Mlig455_029000 {REF} {Length: 1180} {NoTransDecoderORF} {RNA1310_44639}
5. MligTC455_38973 9 0.18 Mlig455_040221

Neo: -

Age: -

0.98 - - - - 0.980 - Mlig455_040221 {REF} {Length: 536} {NoTransDecoderORF} {RNA1310_138048}
6. MligTC455_11163 8 0.17 Mlig455_028249

Neo: -

Age: -

0.976 - - - - 0.976 - Mlig455_028249 {REF} {Length: 245} {NoTransDecoderORF} {RNA1509_6782} {RNA1310_12404} {RNA815_4642}
7. MligTC455_06077 247 5.14 Mlig455_055739

Neo: -

Age: logFC(26M/2M)=0.224

Region-enriched R7: 2.476/0.03088

MTMR3 0.975 - - - 0.975 - - Mlig455_055739 {REF} {Length: 4369} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=343.3]; FYVE zinc finger [PF01363.23, score=57.7]} {Human: ENSG00000100330, MTMR3, myotubularin related protein 3, [RH, Score=297, Expect=3e-86]} {Mouse: ENSMUSG00000034354, Mtmr3, myotubularin related protein 3, [RH, Score=295, Expect=8e-86]} {Dmel: FBgn0030735, CG3632, [RH, Score=268, Expect=4e-76]} {Celegans: WBGene00003476, mtm-3, Myotubularin-related protein 3, [RH, Score=246, Expect=3e-69]} {Smed: dd_Smed_v6_5033_0_1, dd_Smed_v6_5033_0_1, [RH, Score=320, Expect=6e-98]} {RNA1509_52724, RNA1509_7741} {RNA1310_8154, RNA1509_52724, RNA1509_7741} {RNA1509_52724, RNA1509_7741, RNA815_2613}
8. MligTC455_18357 10 0.21 Mlig455_042448

Neo: -

Age: logFC(26M/2M)=-0.393

NWD2 0.968 - - - - 0.968 - Mlig455_042448 {REF} {Length: 6870} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=45.8]; NACHT domain [PF05729.14, score=35.8]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=296, Expect=3e-80]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=304, Expect=7e-83]} {Dmel: FBgn0038397, CG10185, [Score=443, Expect=3e-127]} {Celegans: WBGene00020254, T05C3.2, [Score=403, Expect=4e-114]} {Smed: dd_Smed_v6_11085_0_2, dd_Smed_v6_11085_0_2, [Score=246, Expect=2e-65]} {RNA1509_48979} {RNA1310_12147} {RNA815_29824}
9. MligTC455_24416 437 9.1 Mlig455_036519

Neo: -

Age: Down-Up-Down

Region-enriched R8: 2.853/0.02042

0.966 - - - 0.966 - - Mlig455_036519 {REF} {Length: 1764} {RNA1310_33116} {RNA815_41020}
10. MligTC455_22901 30 0.62 Mlig455_009084

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_009084 {REF} {Length: 1112} {NoTransDecoderORF}
11. MligTC455_46628 40 0.83 Mlig455_010689

Neo: -

Age: -

0.963 - - - 0.963 - - Mlig455_010689 {REF} {Length: 2040} {RNA1310_120885}
12. MligTC455_33703 69 1.44 Mlig455_002442

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_002442 {REF} {Length: 1320} {NoTransDecoderORF} {RNA1310_44761} {RNA815_22052}
13. MligTC455_42240 80 1.66 Mlig455_038267

Neo: -

Age: Down-Up-Down

0.959 - - - - 0.959 - Mlig455_038267 {REF} {Length: 989} {RNA1310_36501} {RNA815_32545}
14. MligTC455_40716 197 4.1 Mlig455_067129

Neo: -

Age: Down-Down-Up

PDE1C 0.957 - - - - 0.957 - Mlig455_067129 {REF} {Length: 2647} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=260.8]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=36.8]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=375, Expect=3e-121]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=383, Expect=1e-124]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=338, Expect=1e-107]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=342, Expect=2e-110]} {Smed: dd_Smed_v6_26758_0_1, dd_Smed_v6_26758_0_1, [Score=419, Expect=1e-140]} {RNA1509_46211} {RNA1310_29930, RNA1509_46211} {RNA1509_46211, RNA815_22606}
15. MligTC455_46229 215 4.48 Mlig455_022523, Mlig455_022563

Neo: -

Age: -

Region-enriched R2: 5.024/0.00529

0.956 - - - - 0.956 -

Mlig455_022523 {REF} {Length: 2044} {RNA1310_42787} {RNA815_17352}

Mlig455_022563 {REF} {Length: 1991} {RNA1310_42787} {RNA815_17352}
16. MligTC455_54017 16 0.33 Mlig455_057257

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_057257 {REF} {Length: 3075} {NoTransDecoderORF} {RNA1509_56320} {RNA1310_36677} {RNA815_10097}
17. MligTC455_27468 40 0.84 Mlig455_013749

Neo: -

Age: -

LNPEP 0.953 - - - - 0.953 - Mlig455_013749 {REF} {Length: 4937} {Pfam: Peptidase family M1 domain [PF01433.22, score=195.1]; Peptidase M1 N-terminal domain [PF17900.3, score=121.7]} {Human: ENSG00000113441, LNPEP, leucyl and cystinyl aminopeptidase, [Score=289, Expect=5e-85]; ENSG00000172901, LVRN, laeverin, [Score=282, Expect=1e-82]; ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=277, Expect=4e-81]; ENSG00000164307, ERAP1, endoplasmic reticulum aminopeptidase 1, [Score=275, Expect=3e-80]} {Mouse: ENSMUSG00000023845, Lnpep, leucyl/cystinyl aminopeptidase, [Score=286, Expect=2e-84]} {Dmel: FBgn0052473, CG32473, [Score=293, Expect=9e-88]} {Celegans: WBGene00003914, pam-1, Aminopeptidase, [Score=251, Expect=2e-72]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=328, Expect=5e-100]} {RNA1509_14706} {RNA1310_6661.1} {RNA815_1900.2}
18. MligTC455_28442 42 0.88 Mlig455_045212

Neo: -

Age: -

Region-enriched R4: 4.609/0.04748

0.952 - - - 0.952 - - Mlig455_045212 {REF} {Length: 1397} {NoTransDecoderORF} {RNA1509_41978} {RNA1310_50527} {RNA815_51225}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA