TomoSeq data search

Data search

Results for MligTC455_13562

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13562	740	15.41	Mlig455_036261, Mlig455_055384	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.904 Regeneration-upregulated R6: 1.792 Regeneration-enriched R6: 1.792	HNRNPC	Mlig455_036261 {REF} {Length: 1410} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.4]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=110, Expect=3e-29]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=1e-28]} {Dmel: FBgn0259935, CG42458, [RH, Score=97.1, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=84.7, Expect=2e-18]} {Smed: dd_Smed_v6_2395_0_1, dd_Smed_v6_2395_0_1, [Score=63.2, Expect=4e-11]} {RNA1509_24675, RNA1509_60071} {RNA1310_11931, RNA1509_60071} {RNA1509_60071, RNA815_6312} Mlig455_055384 {REF} {Length: 1338} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.6]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=108, Expect=4e-29]; ENSG00000283231, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000273865, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000282175, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [RH, Score=103, Expect=7e-26]; ENSG00000282095, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000277058, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]; ENSG00000283292, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]; ENSG00000179172, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [RH, Score=103, Expect=7e-26]; ENSG00000179412, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000282559, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=4e-29]; ENSMUSG00000027593, Raly, hnRNP-associated with lethal yellow, [RH, Score=102, Expect=4e-26]} {Dmel: FBgn0259935, CG42458, [RH, Score=95.5, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [RH, Score=86.7, Expect=1e-19]} {Smed: dd_Smed_v6_2395_0_4, dd_Smed_v6_2395_0_4, [Score=62.4, Expect=4e-11]} {RNA1509_24675} {RNA1310_11931} {RNA815_6312}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_13562

740

15.41

Mlig455_036261, Mlig455_055384

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.904

Regeneration-upregulated R6: 1.792

Regeneration-enriched R6: 1.792

HNRNPC

Mlig455_036261 {REF} {Length: 1410} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.4]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=110, Expect=3e-29]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=1e-28]} {Dmel: FBgn0259935, CG42458, [RH, Score=97.1, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=84.7, Expect=2e-18]} {Smed: dd_Smed_v6_2395_0_1, dd_Smed_v6_2395_0_1, [Score=63.2, Expect=4e-11]} {RNA1509_24675, RNA1509_60071} {RNA1310_11931, RNA1509_60071} {RNA1509_60071, RNA815_6312}

Mlig455_055384 {REF} {Length: 1338} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.6]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=108, Expect=4e-29]; ENSG00000283231, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000273865, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000282175, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [RH, Score=103, Expect=7e-26]; ENSG00000282095, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000277058, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]; ENSG00000283292, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]; ENSG00000179172, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [RH, Score=103, Expect=7e-26]; ENSG00000179412, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000282559, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=4e-29]; ENSMUSG00000027593, Raly, hnRNP-associated with lethal yellow, [RH, Score=102, Expect=4e-26]} {Dmel: FBgn0259935, CG42458, [RH, Score=95.5, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [RH, Score=86.7, Expect=1e-19]} {Smed: dd_Smed_v6_2395_0_4, dd_Smed_v6_2395_0_4, [Score=62.4, Expect=4e-11]} {RNA1509_24675} {RNA1310_11931} {RNA815_6312}

Cumulative graph for MligTC455_13562

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.498	4.216	0.33139	0.97734
RegionR2	-0.229	4.216	0.66165	0.99326
RegionR3	0.06	4.216	0.88169	1.00000
RegionR4	0.866	4.216	0.05025	0.19326
RegionR5	0.598	4.216	0.09688	0.29868
RegionR6	0.186	4.216	0.66462	1.00000
RegionR7	0.204	4.216	0.71829	1.00000
RegionR8	-0.187	4.216	0.80378	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.224	4.216	0.21176	0.95076
RegenerationR2	0.526	4.216	0.16930	0.60803
RegenerationR3	0.981	4.216	0.01740	0.24042
RegenerationR4	0.483	4.216	0.21949	0.66710
RegenerationR5	0.78	4.216	0.03058	0.29245
RegenerationR6	1.792	4.216	0.00000	0.00125	Specific for R6: 1.792
RegenerationBL	1.476	4.216	0.00136	0.02804
RegenerationTP	1.424	4.216	0.00675	0.13863

Genes with expression patterns similar to MligTC455_13562

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13562	740	15.41	Mlig455_036261, Mlig455_055384	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.904 Regeneration-upregulated R6: 1.792 Regeneration-enriched R6: 1.792	HNRNPC	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036261 {REF} {Length: 1410} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.4]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=110, Expect=3e-29]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=1e-28]} {Dmel: FBgn0259935, CG42458, [RH, Score=97.1, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=84.7, Expect=2e-18]} {Smed: dd_Smed_v6_2395_0_1, dd_Smed_v6_2395_0_1, [Score=63.2, Expect=4e-11]} {RNA1509_24675, RNA1509_60071} {RNA1310_11931, RNA1509_60071} {RNA1509_60071, RNA815_6312} Mlig455_055384 {REF} {Length: 1338} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.6]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=108, Expect=4e-29]; ENSG00000283231, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000273865, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000282175, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [RH, Score=103, Expect=7e-26]; ENSG00000282095, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000277058, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]; ENSG00000283292, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]; ENSG00000179172, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [RH, Score=103, Expect=7e-26]; ENSG00000179412, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [RH, Score=103, Expect=7e-26]; ENSG00000282559, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [RH, Score=103, Expect=7e-26]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=4e-29]; ENSMUSG00000027593, Raly, hnRNP-associated with lethal yellow, [RH, Score=102, Expect=4e-26]} {Dmel: FBgn0259935, CG42458, [RH, Score=95.5, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [RH, Score=86.7, Expect=1e-19]} {Smed: dd_Smed_v6_2395_0_4, dd_Smed_v6_2395_0_4, [Score=62.4, Expect=4e-11]} {RNA1509_24675} {RNA1310_11931} {RNA815_6312}
2.	MligTC455_13561	1426	29.71	Mlig455_054532, Mlig455_055458	Neo: Int S/G2/M Age: - Regeneration-upregulated R6: 1.892 Regeneration-enriched R6: 1.892	HNRNPC	5.86	0.967	0.983	0.969	0.992	0.992	0.957	Mlig455_054532 {REF} {Length: 1444} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.4]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=110, Expect=2e-29]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=9e-29]} {Dmel: FBgn0259935, CG42458, [RH, Score=97.1, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=85.5, Expect=1e-18]} {Smed: dd_Smed_v6_2395_0_1, dd_Smed_v6_2395_0_1, [Score=63.2, Expect=5e-11]} {RNA1509_14709, RNA1509_24675} {RNA1310_11931, RNA1509_14709, RNA1509_24675} {RNA1509_14709, RNA1509_24675, RNA815_6312} Mlig455_055458 {REF} {Length: 1438} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.4]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=110, Expect=3e-29]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=8e-29]} {Dmel: FBgn0259935, CG42458, [RH, Score=97.1, Expect=3e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=85.1, Expect=1e-18]} {Smed: dd_Smed_v6_2395_0_4, dd_Smed_v6_2395_0_4, [Score=62.8, Expect=5e-11]} {RNA1509_14709} {RNA1310_11931} {RNA815_6312}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_13562

740

15.41

Mlig455_036261, Mlig455_055384

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.904

Regeneration-upregulated R6: 1.792

Regeneration-enriched R6: 1.792

HNRNPC

1.000

MligTC455_13561

1426

29.71

Mlig455_054532, Mlig455_055458

Neo: Int S/G2/M

Age: -

Regeneration-upregulated R6: 1.892

Regeneration-enriched R6: 1.892

HNRNPC

5.86

0.967

0.983

0.969

0.992

0.957

Mlig455_054532 {REF} {Length: 1444} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.4]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=110, Expect=2e-29]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=9e-29]} {Dmel: FBgn0259935, CG42458, [RH, Score=97.1, Expect=4e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=85.5, Expect=1e-18]} {Smed: dd_Smed_v6_2395_0_1, dd_Smed_v6_2395_0_1, [Score=63.2, Expect=5e-11]} {RNA1509_14709, RNA1509_24675} {RNA1310_11931, RNA1509_14709, RNA1509_24675} {RNA1509_14709, RNA1509_24675, RNA815_6312}

Mlig455_055458 {REF} {Length: 1438} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.4]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [RH, Score=110, Expect=3e-29]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [RH, Score=107, Expect=8e-29]} {Dmel: FBgn0259935, CG42458, [RH, Score=97.1, Expect=3e-22]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=85.1, Expect=1e-18]} {Smed: dd_Smed_v6_2395_0_4, dd_Smed_v6_2395_0_4, [Score=62.8, Expect=5e-11]} {RNA1509_14709} {RNA1310_11931} {RNA815_6312}