TomoSeq data search

Data search

Results for MligTC455_13606

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_13606

37

0.77

Mlig455_060042

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-4.507

CYP2B6

Mlig455_060042 {REF} {Length: 2204} {Pfam: Cytochrome P450 [PF00067.24, score=268.4]} {Human: ENSG00000197408, CYP2B6, cytochrome P450 family 2 subfamily B member 6, [RH, Score=243, Expect=1e-73]} {Mouse: ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=252, Expect=1e-76]; ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=252, Expect=5e-77]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=252, Expect=1e-76]; ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=243, Expect=9e-74]; ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=242, Expect=3e-73]; ENSMUSG00000003053, Cyp2c29, cytochrome P450, family 2, subfamily c, polypeptide 29, [Score=240, Expect=1e-72]} {Dmel: FBgn0036910, Cyp305a1, [Score=173, Expect=2e-47]} {Celegans: WBGene00016686, cyp-33C1, CYtochrome P450 family, [Score=225, Expect=5e-67]} {Smed: dd_Smed_v6_4449_0_1, dd_Smed_v6_4449_0_1, [Score=245, Expect=1e-74]} {RNA1509_9851} {RNA1310_14895, RNA1509_9851} {RNA1509_9851, RNA815_5706}

Cumulative graph for MligTC455_13606

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.576	1.275	1.00000	1.00000
RegionR2	-1.776	1.275	0.99999	1.00000
RegionR3	3.547	1.275	0.99954	1.00000
RegionR4	1.285	1.275	0.99974	1.00000
RegionR5	-1.329	1.275	0.99991	1.00000
RegionR6	-0.489	1.275	0.99981	1.00000
RegionR7	-2.19	1.275	0.99995	1.00000
RegionR8	0.377	1.275	0.99991	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.867	1.275	0.99998	1.00000
RegenerationR2	-2.609	1.275	0.99994	1.00000
RegenerationR3	-3.587	1.275	0.99969	1.00000
RegenerationR4	-1.978	1.275	0.99972	1.00000
RegenerationR5	1.87	1.275	0.99969	1.00000
RegenerationR6	-0.136	1.275	0.99974	1.00000
RegenerationBL	-0.942	1.275	0.99988	1.00000
RegenerationTP	0.162	1.275	0.99984	1.00000

Genes with expression patterns similar to MligTC455_13606

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13606	37	0.77	Mlig455_060042	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-4.507	CYP2B6	2	-	-	1.000	-	1.000	-	Mlig455_060042 {REF} {Length: 2204} {Pfam: Cytochrome P450 [PF00067.24, score=268.4]} {Human: ENSG00000197408, CYP2B6, cytochrome P450 family 2 subfamily B member 6, [RH, Score=243, Expect=1e-73]} {Mouse: ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=252, Expect=1e-76]; ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=252, Expect=5e-77]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=252, Expect=1e-76]; ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=243, Expect=9e-74]; ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=242, Expect=3e-73]; ENSMUSG00000003053, Cyp2c29, cytochrome P450, family 2, subfamily c, polypeptide 29, [Score=240, Expect=1e-72]} {Dmel: FBgn0036910, Cyp305a1, [Score=173, Expect=2e-47]} {Celegans: WBGene00016686, cyp-33C1, CYtochrome P450 family, [Score=225, Expect=5e-67]} {Smed: dd_Smed_v6_4449_0_1, dd_Smed_v6_4449_0_1, [Score=245, Expect=1e-74]} {RNA1509_9851} {RNA1310_14895, RNA1509_9851} {RNA1509_9851, RNA815_5706}
2.	MligTC455_03600	172	3.59	Mlig455_031645	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.335	NIT2	1.657	-	-	0.956	-	0.701	-	Mlig455_031645 {REF} {Length: 967} {TRANSSPLICED} {Pfam: Carbon-nitrogen hydrolase [PF00795.24, score=210.9]} {Human: ENSG00000114021, NIT2, nitrilase family member 2, [RH, Score=306, Expect=2e-104]} {Mouse: ENSMUSG00000022751, Nit2, nitrilase family, member 2, [RH, Score=308, Expect=4e-105]} {Dmel: FBgn0037687, CG8132, [RH, Score=271, Expect=8e-91]} {Celegans: WBGene00003594, nft-1, Nitrilase and fragile histidine triad fusion protein NitFhit Bis(5'-adenosyl)-triphosphatase Nitrilase homolog, [Score=156, Expect=2e-44]} {Smed: dd_Smed_v6_1734_0_1, dd_Smed_v6_1734_0_1, [RH, Score=263, Expect=7e-88]} {RNA1509_7842} {RNA1310_13706.2, RNA1509_7842} {RNA1509_7842, RNA815_18016}
3.	MligTC455_03079	157	3.27	Mlig455_038516, Mlig455_052234	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.732 Region-enriched R4: 5.623/0.00001 Region-enriched R3: 4.446/0.00001		0.989	-	-	0.989	-	-	-	Mlig455_038516 {REF} {Length: 1502} {Pfam: Glycolipid 2-alpha-mannosyltransferase [PF01793.18, score=115.3]} {RNA1509_55347} {RNA1310_24586} {RNA815_10520} Mlig455_052234 {REF} {Length: 1512} {Pfam: Glycolipid 2-alpha-mannosyltransferase [PF01793.18, score=115.3]} {RNA1509_55347} {RNA1310_24586, RNA1509_55347} {RNA1509_55347, RNA815_10520}
4.	MligTC455_37298	680	14.17	Mlig455_052018, Mlig455_057237	Neo: - Age: logFC(26M/2M)=-0.343 Region-enriched R3: 2.210/0.00000		0.976	-	-	-	-	0.976	-	Mlig455_052018 {REF} {Length: 2901} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA1509_59956} {RNA1310_23555, RNA1509_34561, RNA1509_39488, RNA1509_48225} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA815_9532} Mlig455_057237 {REF} {Length: 2860} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_28177, RNA1509_45524} {RNA1310_23555, RNA1509_28177, RNA1509_45524} {RNA1509_28177, RNA1509_45524, RNA815_9532}
5.	MligTC455_26006	278	5.8	Mlig455_028111	Neo: - Age: -		0.97	-	-	0.970	-	-	-	Mlig455_028111 {REF} {Length: 2039} {RNA1509_21210, RNA1509_25057, RNA1509_37447, RNA1509_40812} {RNA1310_16827, RNA1509_21210, RNA1509_25057, RNA1509_37447, RNA1509_40812} {RNA1509_21210, RNA1509_25057, RNA1509_37447, RNA1509_40812, RNA815_5895}
6.	MligTC455_50120	122	2.54	Mlig455_037741	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.412 Region-enriched R4: 3.210/0.03804		0.963	-	-	0.963	-	-	-	Mlig455_037741 {REF} {Length: 3983} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=19.2]} {RNA1509_28857} {RNA1310_11679.2, RNA1509_28857} {RNA1509_28857, RNA815_13148}
7.	MligTC455_15828	52	1.09	Mlig455_069315	Neo: - Age: Down-Up-Down	NOG	0.956	-	-	0.956	-	-	-	Mlig455_069315 {REF} {Length: 2237} {Pfam: Noggin [PF05806.14, score=105.4]} {Human: ENSG00000183691, NOG, noggin, [RH, Score=87.8, Expect=3e-20]} {Mouse: ENSMUSG00000048616, Nog, noggin, [RH, Score=87.8, Expect=2e-20]} {Smed: dd_Smed_v6_15423_0_1, dd_Smed_v6_15423_0_1, [RH, Score=119, Expect=1e-32]} {RNA1310_31637} {RNA815_28948}
8.	MligTC455_12215	33	0.69	Mlig455_015304	Neo: - Age: Down-Up-Up		0.954	-	-	-	-	0.954	-	Mlig455_015304 {REF} {Length: 1635} {RNA1310_33628} {RNA815_33399}
9.	MligTC455_25190	229	4.78	Mlig455_057369, Mlig455_059566	Neo: - Age: - Region-enriched R3: 4.477/0.00003 Region-enriched R5: 2.668/0.02540	KY	0.952	-	-	0.952	-	-	-	Mlig455_057369 {REF} {Length: 6511} {TRANSSPLICED} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=90.5, Expect=9e-18]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=88.2, Expect=3e-17]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=84.0, Expect=6e-16]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=72.4, Expect=1e-12]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=100, Expect=5e-21]} {RNA1509_52056} {RNA1310_3269.1} {RNA815_17000} Mlig455_059566 {REF} {Length: 5873} {RNA1509_6021} {RNA1310_3269.1} {RNA815_17000}
10.	MligTC455_14925	43	0.9	Mlig455_031910	Neo: - Age: -		0.951	-	-	0.951	-	-	-	Mlig455_031910 {REF} {Length: 672} {RNA1310_118829}

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