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Results for MligTC455_13643

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13643 23 0.48 Mlig455_000634

Neo: Irradiation

Age: Up-Down-Down

 GRIA1 Mlig455_000634 {REF} {Length: 2919} {Pfam: Ligand-gated ion channel [PF00060.28, score=135.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=114.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=85.1]; Receptor family ligand binding region [PF01094.30, score=71.6]} {Human: ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=461, Expect=2e-148]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=457, Expect=2e-146]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=446, Expect=2e-142]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=444, Expect=2e-141]} {Mouse: ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=460, Expect=9e-148]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=457, Expect=1e-146]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=449, Expect=2e-143]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=444, Expect=3e-141]} {Dmel: FBgn0004619, GluRIA, Glutamate receptor IA, [Score=386, Expect=9e-119]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=346, Expect=3e-104]} {Smed: dd_Smed_v6_17901_0_1, dd_Smed_v6_17901_0_1, [Score=492, Expect=4e-160]} {RNA1310_20413} {RNA815_63661}

Cumulative graph for MligTC455_13643

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.385 1.082 0.99972 1.00000
RegionR2 4.823 1.082 0.99993 1.00000
RegionR3 -0.596 1.082 0.99977 1.00000
RegionR4 -0.182 1.082 0.85775 1.00000
RegionR5 -2.638 1.082 0.99970 1.00000
RegionR6 1.989 1.082 0.32888 0.91711
RegionR7 0.987 1.082 0.99996 1.00000
RegionR8 2.002 1.082 0.99999 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.891 1.082 0.99990 1.00000
RegenerationR2 4.331 1.082 0.00271 0.07860
RegenerationR3 5.185 1.082 0.00630 0.14341
RegenerationR4 2.49 1.082 0.04518 0.34269
RegenerationR5 2.556 1.082 0.99985 1.00000
RegenerationR6 0.139 1.082 0.91480 1.00000
RegenerationBL 0.005 1.082 0.99986 1.00000
RegenerationTP 0.847 1.082 0.99993 1.00000


Genes with expression patterns similar to MligTC455_13643

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13643 23 0.48 Mlig455_000634

Neo: Irradiation

Age: Up-Down-Down

 GRIA1 4 1.000 1.000 - - 1.000 1.000 Mlig455_000634 {REF} {Length: 2919} {Pfam: Ligand-gated ion channel [PF00060.28, score=135.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=114.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=85.1]; Receptor family ligand binding region [PF01094.30, score=71.6]} {Human: ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=461, Expect=2e-148]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=457, Expect=2e-146]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=446, Expect=2e-142]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=444, Expect=2e-141]} {Mouse: ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=460, Expect=9e-148]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=457, Expect=1e-146]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=449, Expect=2e-143]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=444, Expect=3e-141]} {Dmel: FBgn0004619, GluRIA, Glutamate receptor IA, [Score=386, Expect=9e-119]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=346, Expect=3e-104]} {Smed: dd_Smed_v6_17901_0_1, dd_Smed_v6_17901_0_1, [Score=492, Expect=4e-160]} {RNA1310_20413} {RNA815_63661}
2. MligTC455_02154 8 0.16 Mlig455_000640

Neo: Irradiation

Age: Up-Down-Down

 TTC17 2.702 0.837 0.912 - - 0.953 - Mlig455_000640 {REF} {Length: 3975} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=35.8]; Tetratricopeptide repeat [PF00515.30, score=33.6]; Tetratricopeptide repeat [PF13176.8, score=29.2]; Tetratricopeptide repeat [PF13424.8, score=23.7]; TPR repeat [PF13414.8, score=21.7]} {Human: ENSG00000052841, TTC17, tetratricopeptide repeat domain 17, [RH, Score=159, Expect=5e-39]} {Mouse: ENSMUSG00000027194, Ttc17, tetratricopeptide repeat domain 17, [RH, Score=160, Expect=2e-39]} {Dmel: FBgn0029713, CG11436, [RH, Score=62.8, Expect=1e-09]} {Celegans: WBGene00020553, T19A5.1, [RH, Score=57.0, Expect=9e-08]} {Smed: dd_Smed_v6_11405_0_1, dd_Smed_v6_11405_0_1, [RH, Score=258, Expect=5e-71]} {RNA1509_10619, RNA1509_58302} {RNA1310_1270.1, RNA1509_10619, RNA1509_58302} {RNA1509_10619, RNA1509_58302, RNA815_24250}
3. MligTC455_05865 77 1.6 Mlig455_019309, Mlig455_019530, Mlig455_021054

Neo: -

Age: -

 2.663 0.758 0.942 - - - 0.963

Mlig455_019309 {REF} {Length: 741} {RNA1509_45948} {RNA1310_18762.2} {RNA815_13811}

Mlig455_019530 {REF} {Length: 802} {RNA1509_45948} {RNA1310_18762.1} {RNA815_13811}

Mlig455_021054 {REF} {Length: 762} {RNA1509_45948} {RNA1310_18762.2, RNA1509_45948} {RNA1509_45948, RNA815_13811}
4. MligTC455_29207 22 0.45 Mlig455_052019

Neo: -

Age: logFC(26M/2M)=-0.642

 2.65 0.755 0.902 - - 0.993 - Mlig455_052019 {REF} {Length: 1394} {RNA1310_31570} {RNA815_32340}
5. MligTC455_10615 26 0.55 Mlig455_025293

Neo: -

Age: Up-Down-Down

Region-enriched R8: 6.139/0.01501

Regeneration-downregulated R4: -2.694

Regeneration-depleted R4: -2.694

 2.641 0.797 0.874 - - 0.970 - Mlig455_025293 {REF} {Length: 1557} {NoTransDecoderORF} {RNA1509_5193} {RNA1310_42887} {RNA815_311}
6. MligTC455_24120 187 3.9 Mlig455_058994

Neo: Irradiation

Age: -

Region-specific R4: 5.890

Region-enriched R4: 4.246/0.00045

 KREMEN2 2.622 0.876 0.789 - - 0.957 - Mlig455_058994 {REF} {Length: 1786} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=44.6]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=53.1, Expect=2e-08]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=50.4, Expect=9e-08]} {RNA1509_52786} {RNA1310_23094} {RNA815_14870.1}
7. MligTC455_32887 326 6.8 Mlig455_038614

Neo: Germline

Age: -

 2.621 0.848 0.796 - - 0.977 - Mlig455_038614 {REF} {Length: 1336} {RNA1509_7781} {RNA1310_35841.1} {RNA815_17077}
8. MligTC455_14408 25 0.51 Mlig455_065855, Mlig455_065862

Neo: -

Age: -

 2.606 0.709 0.909 - - 0.988 -

Mlig455_065855 {REF} {Length: 505} {NoTransDecoderORF} {RNA1310_1284} {RNA815_45080}

Mlig455_065862 {REF} {Length: 687} {NoTransDecoderORF} {RNA1310_1284} {RNA815_45080}
9. MligTC455_33653 15 0.31 Mlig455_019541

Neo: Irradiation

Age: Up-Down-Down

 PLD2 2.571 0.870 0.703 - - 0.998 - Mlig455_019541 {REF} {Length: 6856} {Human: ENSG00000129219, PLD2, phospholipase D2, [Score=172, Expect=1e-42]} {Mouse: ENSMUSG00000020828, Pld2, phospholipase D2, [Score=171, Expect=2e-42]} {Dmel: FBgn0033075, Pld, Phospholipase D, [Score=150, Expect=9e-36]} {Celegans: WBGene00004040, pld-1, PhosphoLipase D; Phospholipase D, [Score=155, Expect=1e-37]} {Smed: dd_Smed_v6_61149_0_1, dd_Smed_v6_61149_0_1, [Score=170, Expect=1e-45]} {RNA1509_8481} {RNA1310_1353.1, RNA1509_8481} {RNA1509_8481, RNA815_2465}
10. MligTC455_51853 199 4.14 Mlig455_054082

Neo: Irradiation

Age: -

Region-specific R4: 5.032

Region-enriched R4: 4.280/0.00000

Regeneration-downregulated R4: -2.554

Regeneration-depleted R4: -2.554

 2.571 0.961 0.779 - - 0.831 - Mlig455_054082 {REF} {Length: 2433} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.7]; MFS/sugar transport protein [PF13347.8, score=49.3]; MFS_1 like family [PF12832.9, score=36.5]; PUCC protein [PF03209.17, score=35.8]; Sugar (and other) transporter [PF00083.26, score=25.9]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_53540} {RNA1310_30811.1, RNA1509_53540} {RNA1509_53540, RNA815_24118}
11. MligTC455_36195 47 0.97 Mlig455_020257

Neo: Irradiation

Age: -

Region-enriched R4: 6.754/0.00000

 2.549 0.895 0.952 - - - 0.702 Mlig455_020257 {REF} {Length: 1435} {Pfam: Domain of unknown function (DUF4419) [PF14388.8, score=72.6]} {RNA1509_22232} {RNA1310_24935, RNA1509_22232} {RNA1509_22232, RNA815_11803}
12. MligTC455_40428 47 0.98 Mlig455_017180

Neo: Irradiation

Age: -

Region-enriched R4: 5.668/0.00000

 2.544 0.956 0.739 - - - 0.849 Mlig455_017180 {REF} {Length: 3254} {RNA1509_22767, RNA1509_52352} {RNA1310_22898.1, RNA1509_22767} {RNA1509_22767, RNA815_40500}
13. MligTC455_18808 105 2.19 Mlig455_042699

Neo: Irradiation

Age: Up-Down-Down

 2.531 0.959 0.839 - - 0.733 - Mlig455_042699 {REF} {Length: 2382} {Pfam: LicD family [PF04991.15, score=55.8]} {Smed: dd_Smed_v6_5971_0_1, dd_Smed_v6_5971_0_1, [Score=110, Expect=1e-27]} {RNA1509_30898, RNA1509_36360, RNA1509_50563} {RNA1310_12458, RNA1509_30898, RNA1509_36360, RNA1509_50563} {RNA1509_30898, RNA1509_36360, RNA1509_50563, RNA815_10325}
14. MligTC455_18807 97 2.01 Mlig455_042665

Neo: Irradiation

Age: Up-Down-Down

 2.531 0.959 0.844 - - - 0.728 Mlig455_042665 {REF} {Length: 2239} {Pfam: LicD family [PF04991.15, score=55.7]} {Smed: dd_Smed_v6_5971_0_1, dd_Smed_v6_5971_0_1, [Score=110, Expect=1e-27]} {RNA1509_30898} {RNA1310_12458} {RNA815_10325}
15. MligTC455_17118 151 3.15 Mlig455_027979

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.468

Region-specific R4: 5.420

Region-enriched R4: 4.752/0.00000

 2.505 0.951 0.822 - - - 0.732 Mlig455_027979 {REF} {Length: 2143} {RNA1509_9198} {RNA1310_22921.1} {RNA815_9478}
16. MligTC455_38052 131 2.72 Mlig455_068610

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 6.633

Region-enriched R4: 4.016/0.00000

 2.495 0.952 0.763 - - - 0.780 Mlig455_068610 {REF} {Length: 2281} {RNA1509_27881} {RNA1310_9115} {RNA815_34427}
17. MligTC455_13594 39 0.8 Mlig455_058629

Neo: -

Age: -

 2.465 0.733 0.772 - - - 0.960 Mlig455_058629 {REF} {Length: 998} {RNA1310_62227}
18. MligTC455_27263 67 1.39 Mlig455_053712

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 3.220/0.02483

 1.935 - 0.970 - - - 0.965 Mlig455_053712 {REF} {Length: 1169} {Pfam: Cell division protein ZapB [PF06005.14, score=22.3]} {RNA1509_34331} {RNA1310_24939} {RNA815_13293}
19. MligTC455_10099 94 1.95 Mlig455_038684, Mlig455_038698

Neo: Germline

Age: Down-Down-Down, logFC(26M/2M)=-0.820

Region-specific R4: 6.728

Region-enriched R4: 6.187/0.00013

 1.877 0.908 0.969 - - - -

Mlig455_038684 {REF} {Length: 1407} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.9]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=105, Expect=4e-26]} {RNA1509_30575} {RNA1310_32071.3} {RNA815_13547.1}

Mlig455_038698 {REF} {Length: 1405} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.9]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=105, Expect=4e-26]} {RNA1509_30575} {RNA1310_32071.3} {RNA815_13547.1}
20. MligTC455_39073 54 1.13 Mlig455_060146

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 5.421/0.00338

 1.866 0.991 0.875 - - - - Mlig455_060146 {REF} {Length: 1210} {Pfam: Tetraspanin family [PF00335.22, score=37.8]} {RNA1310_33145} {RNA815_11307}
21. MligTC455_11568 6 0.12 Mlig455_012817

Neo: -

Age: -

 1.857 0.986 0.871 - - - - Mlig455_012817 {REF} {Length: 856} {NoTransDecoderORF} {RNA1509_22677} {RNA1310_59289} {RNA815_51711}
22. MligTC455_14373 34 0.71 Mlig455_018506

Neo: -

Age: Down-Down-Up

Region-enriched R4: 3.076/0.04507

 1.85 - 0.958 - - - 0.892 Mlig455_018506 {REF} {Length: 1948} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=47.6]} {Smed: dd_Smed_v6_32358_0_1, dd_Smed_v6_32358_0_1, [Score=92.4, Expect=3e-21]} {RNA1509_57253} {RNA1310_16709.2} {RNA815_10544.1}
23. MligTC455_29801 18 0.37 Mlig455_036199

Neo: Irradiation

Age: Up-Down-Down

 SCNN1B 1.847 0.951 0.896 - - - - Mlig455_036199 {REF} {Length: 3178} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=184.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=65.5, Expect=2e-10]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=104, Expect=2e-23]} {RNA1509_47645} {RNA1310_11333.1} {RNA815_9471.1}
24. MligTC455_12518 11 0.22 Mlig455_023552

Neo: -

Age: -

 1.845 0.967 0.878 - - - - Mlig455_023552 {REF} {Length: 673} {RNA1509_22223} {RNA1310_60769} {RNA815_31256}
25. MligTC455_21775 61 1.27 Mlig455_028143

Neo: -

Age: -

Region-enriched R4: 6.480/0.00013

 1.845 0.954 0.891 - - - - Mlig455_028143 {REF} {Length: 1724} {RNA1509_42567} {RNA1310_29963} {RNA815_28272}
26. MligTC455_24846 21 0.45 Mlig455_053296, Mlig455_053417

Neo: -

Age: -

Region-enriched R4: 4.606/0.01379

 1.845 0.873 0.972 - - - -

Mlig455_053296 {REF} {Length: 508} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59965} {RNA1310_89009} {RNA815_38962.2}

Mlig455_053417 {REF} {Length: 1347} {Pfam: Winged helix-turn helix [PF13551.8, score=19.2]} {RNA1509_10628} {RNA1310_33625.3} {RNA815_10117.1}
27. MligTC455_36105 331 6.9 Mlig455_045079

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.404

Region-enriched R4: 4.256/0.00008

 1.838 0.960 0.878 - - - - Mlig455_045079 {REF} {Length: 1216} {RNA1509_3120} {RNA1310_59847} {RNA815_64795}
28. MligTC455_42265 34 0.71 Mlig455_015790

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 5.124/0.02699

 1.837 0.954 0.883 - - - - Mlig455_015790 {REF} {Length: 1177} {RNA1509_57368} {RNA1310_24979.1, RNA1509_57368} {RNA1509_57368, RNA815_12703}
29. MligTC455_12395 12 0.25 Mlig455_044316

Neo: -

Age: -

 1.836 0.975 0.861 - - - - Mlig455_044316 {REF} {Length: 450} {NoTransDecoderORF} {RNA1509_26993} {RNA1310_43227} {RNA815_39261}
30. MligTC455_18130 33 0.69 Mlig455_059533

Neo: Irradiation

Age: -

 1.836 0.951 0.885 - - - - Mlig455_059533 {REF} {Length: 904} {NoTransDecoderORF} {RNA1509_59102} {RNA1310_41510, RNA1509_59102} {RNA1509_59102, RNA815_23156}
31. MligTC455_50797 68 1.41 Mlig455_017800

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.732

Region-enriched R4: 4.948/0.00001

 NEFM 1.835 0.974 0.861 - - - - Mlig455_017800 {REF} {Length: 2914} {Human: ENSG00000104722, NEFM, neurofilament medium, [RH, Score=55.5, Expect=3e-07]} {RNA1509_16831, RNA1509_43018} {RNA1310_7404, RNA1509_43018} {RNA1509_43018, RNA815_2824.1}
32. MligTC455_13175 16 0.34 Mlig455_025368

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 5.751/0.00133

 1.831 0.973 0.858 - - - - Mlig455_025368 {REF} {Length: 1727} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.4]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=112, Expect=1e-26]} {RNA1310_55905} {RNA815_48724}
33. MligTC455_45194 7 0.14 Mlig455_064088

Neo: Irradiation

Age: Up-Down-Down

 1.828 0.966 0.862 - - - - Mlig455_064088 {REF} {Length: 757} {NoTransDecoderORF} {RNA1509_37848} {RNA1310_27044} {RNA815_17120}
34. MligTC455_45639 99 2.06 Mlig455_051520, Mlig455_051554

Neo: Germline

Age: Up-Down-Down

 1.828 0.954 0.874 - - - -

Mlig455_051520 {REF} {Length: 1162} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=60.5, Expect=5e-13]} {RNA1509_49657} {RNA1310_34485.1, RNA1509_49657} {RNA1509_49657, RNA815_41451}

Mlig455_051554 {REF} {Length: 1174} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=45.4, Expect=8e-08]} {RNA1509_49657} {RNA1310_34485.1} {RNA815_41451}
35. MligTC455_01479 8 0.16 Mlig455_018082

Neo: Germline

Age: -

 1.823 - 0.957 - - - 0.866 Mlig455_018082 {REF} {Length: 851} {RNA1310_71658} {RNA815_45524}
36. MligTC455_30201 49 1.02 Mlig455_006805

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.603

 SCNN1B 1.82 0.847 0.973 - - - - Mlig455_006805 {REF} {Length: 2461} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=193.3]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=54.7, Expect=3e-07]; ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=54.7, Expect=4e-07]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=58.2, Expect=2e-08]; ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=95.1, Expect=2e-20]} {RNA1509_36956} {RNA1310_12232.1} {RNA815_4577.1}
37. MligTC455_14727 11 0.23 Mlig455_062713

Neo: -

Age: -

 1.811 0.981 - - - 0.830 - Mlig455_062713 {REF} {Length: 1696} {NoTransDecoderORF} {RNA1509_39955} {RNA1310_82169} {RNA815_46001}
38. MligTC455_03947 45 0.93 Mlig455_008448, Mlig455_031362

Neo: -

Age: -

 1.81 0.958 0.852 - - - -

Mlig455_008448 {REF} {Length: 538} {NoTransDecoderORF} {RNA1310_69781} {RNA815_48064}

Mlig455_031362 {REF} {Length: 838} {NoTransDecoderORF} {RNA1310_69781} {RNA815_48064}
39. MligTC455_44126 14 0.28 Mlig455_055378

Neo: -

Age: Down-Up-Down

 TTLL13P 1.808 0.954 0.854 - - - - Mlig455_055378 {REF} {Length: 3061} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=269.8]; YheC/D like ATP-grasp [PF14398.8, score=24.7]; Sugar-transfer associated ATP-grasp [PF14397.8, score=20.6]} {Human: ENSG00000213471, TTLL13P, tubulin tyrosine ligase like 13, pseudogene, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000045467, Ttll13, tubulin tyrosine ligase-like family, member 13, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0039501, CG5987, [Score=444, Expect=1e-143]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=206, Expect=2e-56]} {Smed: dd_Smed_v6_8131_0_1, dd_Smed_v6_8131_0_1, [Score=679, Expect=0.0]} {RNA1509_17118} {RNA1310_6646.1} {RNA815_17546}
40. MligTC455_12372 45 0.93 Mlig455_018553, Mlig455_019420

Neo: -

Age: -

 1.796 0.985 0.811 - - - -

Mlig455_018553 {REF} {Length: 694} {RNA1509_25480} {RNA1310_69956.2} {RNA815_40423}

Mlig455_019420 {REF} {Length: 569} {RNA1509_25480} {RNA1310_69956.1} {RNA815_40423}
41. MligTC455_09570 62 1.29 Mlig455_063879

Neo: -

Age: -

Region-specific R4: 7.248

Region-enriched R4: 5.809/0.00103

 1.795 0.828 0.967 - - - - Mlig455_063879 {REF} {Length: 629} {NoTransDecoderORF} {RNA1310_71536} {RNA815_39466}
42. MligTC455_07817 87 1.81 Mlig455_008042

Neo: Germline

Age: -

 1.793 0.833 0.960 - - - - Mlig455_008042 {REF} {Length: 1040} {RNA1509_56901} {RNA1310_38278} {RNA815_20254}
43. MligTC455_38109 869 18.1 Mlig455_017532, Mlig455_026821, Mlig455_035714

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.412

Region-enriched R4: 3.656/0.00000

Regeneration-downregulated R4: -2.467

Regeneration-depleted R4: -2.467

 1.784 0.954 0.830 - - - -

Mlig455_017532 {REF} {Length: 1081} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.8]} {RNA1509_45144} {RNA1310_69368.2, RNA1509_45144} {RNA1509_45144, RNA815_36754}

Mlig455_026821 {REF} {Length: 1101} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=24.0]} {RNA1509_45144, RNA1509_56162} {RNA1310_71546, RNA1509_56162} {RNA1509_56162, RNA815_36754}

Mlig455_035714 {REF} {Length: 535} {NoTransDecoderORF}
44. MligTC455_47898 18 0.38 Mlig455_000079

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.674

 1.78 0.819 0.961 - - - - Mlig455_000079 {REF} {Length: 2941} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.2]} {RNA1509_16596} {RNA1310_58467} {RNA815_45213}
45. MligTC455_11465 349 7.28 Mlig455_059398

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.517

Region-specific R4: 5.141

Region-enriched R4: 3.833/0.00000

 1.775 0.962 0.813 - - - - Mlig455_059398 {REF} {Length: 2060} {RNA1509_18619, RNA1509_21489} {RNA1310_20640, RNA1509_18619, RNA1509_21489} {RNA1509_18619, RNA1509_21489, RNA815_20184}
46. MligTC455_40174 136 2.83 Mlig455_046121

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.539

Region-enriched R4: 5.211/0.00006

 1.774 0.966 0.808 - - - - Mlig455_046121 {REF} {Length: 1669} {TRANSSPLICED} {RNA1509_23820, RNA1509_56259} {RNA1310_15082, RNA1509_56259} {RNA1509_56259, RNA815_2604}
47. MligTC455_34654 925 19.28 Mlig455_058019, Mlig455_058177

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.722

Region-enriched R4: 3.961/0.00000

Regeneration-depleted R5: -5.629
Regeneration-depleted R4: -3.601

 PPEF1 1.77 0.953 0.817 - - - -

Mlig455_058019 {REF} {Length: 2242} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=91.6]; EF-hand domain pair [PF13499.8, score=66.1]; EF hand [PF00036.34, score=63.7]; EF-hand domain pair [PF13833.8, score=57.0]; EF-hand domain [PF13405.8, score=56.8]; EF hand [PF13202.8, score=49.2]; PPP5 TPR repeat region [PF08321.14, score=45.8]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=21.8]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [Score=528, Expect=1e-180]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=510, Expect=7e-174]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=490, Expect=3e-166]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=568, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=645, Expect=0.0]} {RNA1509_3508} {RNA1310_11714.1} {RNA815_4130}

Mlig455_058177 {REF} {Length: 2243} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=90.9]; EF-hand domain pair [PF13499.8, score=64.2]; EF hand [PF00036.34, score=60.6]; EF-hand domain pair [PF13833.8, score=57.0]; EF-hand domain [PF13405.8, score=54.5]; EF hand [PF13202.8, score=49.2]; PPP5 TPR repeat region [PF08321.14, score=45.8]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=21.8]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [Score=528, Expect=0.0]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [Score=509, Expect=9e-174]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [Score=489, Expect=1e-165]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [Score=568, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_2, dd_Smed_v6_11874_0_2, [Score=640, Expect=0.0]} {RNA1509_3508} {RNA1310_11714.1} {RNA815_4130}
48. MligTC455_07747 55 1.14 Mlig455_016698

Neo: -

Age: -

 1.769 0.779 - - - - 0.990 Mlig455_016698 {REF} {Length: 774} {RNA1310_51880} {RNA815_35003}
49. MligTC455_09848 11 0.23 Mlig455_018139, Mlig455_018193

Neo: -

Age: -

 1.769 0.804 - - - - 0.965

Mlig455_018139 {REF} {Length: 612} {TRANSSPLICED} {RNA1310_46963} {RNA815_36938}

Mlig455_018193 {REF} {Length: 905} {RNA1310_46963} {RNA815_36938}
50. MligTC455_32218 13 0.27 Mlig455_015343

Neo: -

Age: -

 1.769 0.986 0.783 - - - - Mlig455_015343 {REF} {Length: 2230} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=39.5]; DDE superfamily endonuclease [PF13358.8, score=19.3]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=71.2, Expect=3e-13]} {RNA1509_41917} {RNA1310_5589.1} {RNA815_12536.1}
51. MligTC455_10836 719 14.98 Mlig455_028067, Mlig455_028130

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.257

 1.768 0.956 0.812 - - - -

Mlig455_028067 {REF} {Length: 2107} {RNA1509_26543, RNA1509_29553} {RNA1310_12510, RNA1509_26543, RNA1509_29553} {RNA1509_26543, RNA1509_29553, RNA815_5127.1}

Mlig455_028130 {REF} {Length: 2123} {RNA1509_43043, RNA1509_7602} {RNA1310_12510, RNA1509_43043} {RNA1509_43043, RNA815_5127.1}
52. MligTC455_48890 937 19.53 Mlig455_063442, Mlig455_063476

Neo: Germline

Age: -

Region-specific R4: 5.350

Region-enriched R4: 4.179/0.00000

 DLL4 1.768 0.950 0.818 - - - -

Mlig455_063442 {REF} {Length: 2091} {Pfam: Delta serrate ligand [PF01414.21, score=58.9]} {Human: ENSG00000128917, DLL4, delta like canonical Notch ligand 4, [Score=54.3, Expect=5e-08]} {Mouse: ENSMUSG00000027314, Dll4, delta like canonical Notch ligand 4, [Score=55.1, Expect=2e-08]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_7412} {RNA1310_30627} {RNA815_14058.1}

Mlig455_063476 {REF} {Length: 1150} {Pfam: Delta serrate ligand [PF01414.21, score=59.7]} {Human: ENSG00000128917, DLL4, delta like canonical Notch ligand 4, [Score=51.2, Expect=8e-07]; ENSG00000184916, JAG2, jagged 2, [Score=49.7, Expect=3e-06]} {Mouse: ENSMUSG00000027314, Dll4, delta like canonical Notch ligand 4, [Score=52.0, Expect=3e-07]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=48.1, Expect=3e-06]} {RNA1509_53382, RNA1509_7412} {RNA1310_30627, RNA1509_53382, RNA1509_7412} {RNA1509_53382, RNA1509_7412, RNA815_14058.1}
53. MligTC455_03311 56 1.17 Mlig455_002545, Mlig455_002588

Neo: Int S/G2/M

Age: -

 1.767 0.802 - - - - 0.965

Mlig455_002545 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_130432} {RNA815_14633}

Mlig455_002588 {REF} {Length: 817} {RNA1310_130432} {RNA815_14633}
54. MligTC455_14791 116 2.41 Mlig455_014400

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.458

Region-specific R4: 6.782

Region-enriched R4: 3.738/0.01843

 TMEM30A 1.766 0.951 0.815 - - - - Mlig455_014400 {REF} {Length: 3042} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=179.8]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [Score=124, Expect=3e-31]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [Score=127, Expect=1e-32]} {Dmel: FBgn0030752, CG9947, [Score=134, Expect=2e-35]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=122, Expect=5e-31]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=129, Expect=9e-34]} {RNA1509_17463, RNA1509_52829} {RNA1310_10723, RNA1509_17463, RNA1509_52829} {RNA1509_17463, RNA1509_52829, RNA815_9781}
55. MligTC455_44130 19 0.41 Mlig455_055443

Neo: Germline

Age: -

 1.766 0.794 0.972 - - - - Mlig455_055443 {REF} {Length: 654} {RNA1509_42921} {RNA1310_29530} {RNA815_41809}
56. MligTC455_31711 279 5.82 Mlig455_069480, Mlig455_069493

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.798

Region-enriched R4: 2.856/0.03209

 1.764 0.967 0.797 - - - -

Mlig455_069480 {REF} {Length: 2364} {RNA1509_56734} {RNA1310_14093.1, RNA1509_56734} {RNA1509_56734, RNA815_3850.1}

Mlig455_069493 {REF} {Length: 2332} {RNA1509_56734} {RNA1310_14093.1} {RNA815_24706.2}
57. MligTC455_14980 153 3.19 Mlig455_053275

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.403

 1.761 - 0.794 - - 0.967 - Mlig455_053275 {REF} {Length: 2260} {RNA1509_16970} {RNA1310_23946, RNA1509_16970} {RNA1509_16970, RNA815_22156}
58. MligTC455_10109 293 6.1 Mlig455_048170, Mlig455_048192

Neo: Irradiation

Age: -

Region-specific R4: 5.686

Region-enriched R4: 4.002/0.00000

 1.757 0.968 0.789 - - - -

Mlig455_048170 {REF} {Length: 1500} {RNA1509_24982} {RNA1310_29998} {RNA815_15111}

Mlig455_048192 {REF} {Length: 1497} {RNA1509_24982} {RNA1310_29998} {RNA815_15111}
59. MligTC455_29710 477 9.94 Mlig455_027565

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.604

Region-enriched R4: 3.683/0.00000

 1.755 0.950 0.805 - - - - Mlig455_027565 {REF} {Length: 1698} {Pfam: SAP domain [PF02037.29, score=35.4]} {RNA1509_10113} {RNA1310_19548} {RNA815_12576}
60. MligTC455_46984 51 1.06 Mlig455_067198

Neo: -

Age: -

 1.755 0.950 0.805 - - - - Mlig455_067198 {REF} {Length: 1049} {RNA1509_33617} {RNA1310_1047.1} {RNA815_3186.1}
61. MligTC455_51619 168 3.5 Mlig455_044464

Neo: -

Age: -

Region-specific R4: 5.929

Region-enriched R4: 3.458/0.00014

 1.75 0.975 0.775 - - - - Mlig455_044464 {REF} {Length: 1106} {RNA1509_26062, RNA1509_37356, RNA1509_50127} {RNA1310_34145, RNA1509_26062, RNA1509_37356, RNA1509_50127} {RNA1509_26062, RNA1509_37356, RNA1509_50127, RNA815_15838}
62. MligTC455_02273 9 0.19 Mlig455_009089

Neo: -

Age: -

 1.748 0.959 - - - - 0.789 Mlig455_009089 {REF} {Length: 581} {NoTransDecoderORF} {RNA1310_69089} {RNA815_35251}
63. MligTC455_42457 63 1.31 Mlig455_020182

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.680

Region-enriched R4: 3.390/0.03030

 1.731 - 0.778 - - 0.953 - Mlig455_020182 {REF} {Length: 1595} {TRANSSPLICED} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=57.0, Expect=2e-10]} {RNA1509_59965} {RNA1310_27831} {RNA815_27307}
64. MligTC455_34448 130 2.71 Mlig455_037134

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.556

Region-enriched R4: 4.959/0.00000

 PPP1CC 1.726 0.962 0.764 - - - - Mlig455_037134 {REF} {Length: 1561} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=98.9]} {Human: ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=211, Expect=2e-65]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=1e-65]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=2e-63]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=210, Expect=3e-65]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=1e-63]} {Dmel: FBgn0003140, PpY-55A, Protein phosphatase Y at 55A, [Score=219, Expect=5e-69]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=217, Expect=6e-68]} {Smed: dd_Smed_v6_23492_0_1, dd_Smed_v6_23492_0_1, [Score=213, Expect=5e-67]} {RNA1509_57984, RNA1509_8839} {RNA1310_21841, RNA1509_57984, RNA1509_8839} {RNA1509_57984, RNA1509_8839, RNA815_11327.2}
65. MligTC455_18675 14 0.3 Mlig455_030130, Mlig455_071090

Neo: -

Age: -

 1.722 0.734 - - - 0.988 -

Mlig455_030130 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_32086} {RNA1310_41612.1} {RNA815_51913}

Mlig455_071090 {REF} {Length: 1159} {RNA1310_134040}
66. MligTC455_20271 58 1.2 Mlig455_013994

Neo: Germline

Age: Up-Down-Up

 1.721 0.762 0.959 - - - - Mlig455_013994 {REF} {Length: 1947} {RNA1509_45350} {RNA1310_35055, RNA1509_45350} {RNA1509_45350, RNA815_40723}
67. MligTC455_12105 21 0.43 Mlig455_015631

Neo: -

Age: -

 1.718 - - - - 0.726 0.992 Mlig455_015631 {REF} {Length: 1685} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=64.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.3]; Serpentine type 7TM GPCR chemoreceptor Srbc [PF10316.11, score=22.5]} {Smed: dd_Smed_v6_13742_0_1, dd_Smed_v6_13742_0_1, [Score=82.4, Expect=2e-17]} {RNA1310_95837}
68. MligTC455_06431 16 0.33 Mlig455_052844

Neo: -

Age: Down-Up-Down

 1.717 0.975 0.742 - - - - Mlig455_052844 {REF} {Length: 2363} {RNA1509_48491} {RNA1310_28993} {RNA815_35050}
69. MligTC455_49753 351 7.32 Mlig455_031618

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.030

Region-enriched R4: 3.400/0.00442

 ACP2 1.716 0.952 0.764 - - - - Mlig455_031618 {REF} {Length: 1772} {Pfam: Histidine phosphatase superfamily (branch 2) [PF00328.24, score=63.0]} {Human: ENSG00000134575, ACP2, acid phosphatase 2, lysosomal, [Score=158, Expect=6e-44]} {Mouse: ENSMUSG00000002103, Acp2, acid phosphatase 2, lysosomal, [Score=162, Expect=2e-45]} {Dmel: FBgn0000032, Acph-1, Acid phosphatase 1, [Score=144, Expect=1e-38]} {Celegans: WBGene00015161, pho-5, Putative acid phosphatase 5, [Score=164, Expect=3e-46]} {Smed: dd_Smed_v6_11594_0_1, dd_Smed_v6_11594_0_1, [Score=154, Expect=3e-42]} {RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415} {RNA1310_25105.1, RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415} {RNA1509_10126, RNA1509_23696, RNA1509_24149, RNA1509_26659, RNA1509_32415, RNA815_11001.1}
70. MligTC455_44055 305 6.36 Mlig455_034647

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.440

Region-specific R4: 5.358

Region-enriched R4: 3.152/0.00000

 1.714 0.956 0.758 - - - - Mlig455_034647 {REF} {Length: 2170} {RNA1509_8332} {RNA1310_14667, RNA1509_8332} {RNA1509_8332, RNA815_5671}
71. MligTC455_04736 18 0.38 Mlig455_034067

Neo: -

Age: Up-Down-Down

 1.711 0.965 0.746 - - - - Mlig455_034067 {REF} {Length: 809} {RNA1310_15334} {RNA815_21155}
72. MligTC455_39593 1058 22.04 Mlig455_015027, Mlig455_038420, Mlig455_038624

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.955

Region-enriched R4: 4.577/0.00000

 1.711 0.952 0.759 - - - -

Mlig455_015027 {REF} {Length: 1735} {Pfam: WSC domain [PF01822.21, score=62.6]; F5/8 type C domain [PF00754.27, score=19.1]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=60.8, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=48.9, Expect=7e-06]} {RNA1509_11828, RNA1509_47232} {RNA1310_16499, RNA1509_11828, RNA1509_47232} {RNA1509_11828, RNA1509_47232, RNA815_7337}

Mlig455_038420 {REF} {Length: 2058} {Pfam: F5/8 type C domain [PF00754.27, score=19.0]} {RNA1509_27841, RNA1509_47727} {RNA1310_16499, RNA1509_27841, RNA1509_47727} {RNA1509_27841, RNA1509_47727, RNA815_7337}

Mlig455_038624 {REF} {Length: 1910} {Pfam: WSC domain [PF01822.21, score=62.6]; F5/8 type C domain [PF00754.27, score=19.0]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=60.5, Expect=2e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=48.5, Expect=9e-06]} {RNA1509_27841} {RNA1310_16499} {RNA815_7337}
73. MligTC455_36766 56 1.17 Mlig455_031817

Neo: -

Age: Down-Up-Down

Region-enriched R2: 5.086/0.02148
Region-enriched R4: 3.577/0.00987

 1.709 - 0.757 - - 0.952 - Mlig455_031817 {REF} {Length: 4913} {Pfam: Caspase domain [PF00656.24, score=24.0]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=4e-08]} {RNA1509_18240} {RNA1310_3181} {RNA815_2826}
74. MligTC455_31655 9 0.18 Mlig455_042464

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.863

 RTL1 1.706 0.736 0.970 - - - - Mlig455_042464 {REF} {Length: 4856} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=115.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=85.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=68.6, Expect=3e-11]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=76.3, Expect=7e-14]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=76.3, Expect=7e-14]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=275, Expect=2e-84]} {RNA1509_37360} {RNA1310_1636} {RNA815_16797}
75. MligTC455_15517 645 13.44 Mlig455_036822, Mlig455_053025

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.286

Region-enriched R4: 3.766/0.00000

 1.705 0.953 0.752 - - - -

Mlig455_036822 {REF} {Length: 1125} {RNA1509_6281} {RNA1310_42233, RNA1509_6281} {RNA1509_6281, RNA815_26722}

Mlig455_053025 {REF} {Length: 944} {RNA1509_6281} {RNA1310_42233} {RNA815_26722}
76. MligTC455_52711 134 2.8 Mlig455_027431, Mlig455_027436

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.507

Region-enriched R4: 4.964/0.00021

 1.705 0.969 0.736 - - - -

Mlig455_027431 {REF} {Length: 4137} {RNA1509_4107, RNA1509_59403} {RNA1310_2225.1, RNA1509_59403} {RNA1509_59403, RNA815_686.1}

Mlig455_027436 {REF} {Length: 4384} {RNA1509_4107} {RNA1310_2225.1} {RNA815_686.1}
77. MligTC455_49924 147 3.06 Mlig455_044235, Mlig455_044254

Neo: -

Age: -

Region-specific R4: 4.592

Region-enriched R4: 3.286/0.00493

 PCDH9 1.704 - 0.742 - - 0.962 -

Mlig455_044235 {REF} {Length: 4574} {Pfam: Cadherin domain [PF00028.19, score=254.3]; Cadherin-like [PF16184.7, score=36.8]; Cadherin-like [PF08266.14, score=36.5]; Cadherin prodomain like [PF08758.13, score=20.8]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=288, Expect=3e-80]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=286, Expect=1e-79]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=281, Expect=1e-77]} {Dmel: FBgn0284247, ds, dachsous, [Score=271, Expect=4e-74]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=147, Expect=2e-35]} {Smed: dd_Smed_v6_7807_0_1, dd_Smed_v6_7807_0_1, [RH, Score=389, Expect=2e-116]} {RNA1509_44126} {RNA1310_6529, RNA1509_44126} {RNA1509_44126, RNA815_26058}

Mlig455_044254 {REF} {Length: 4218} {Pfam: Cadherin domain [PF00028.19, score=254.9]; Cadherin-like [PF08266.14, score=36.4]; Cadherin-like [PF16184.7, score=36.3]; Cadherin prodomain like [PF08758.13, score=20.7]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=290, Expect=1e-80]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=288, Expect=5e-80]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=282, Expect=5e-78]} {Dmel: FBgn0284247, ds, dachsous, [Score=271, Expect=8e-74]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=148, Expect=9e-36]} {Smed: dd_Smed_v6_7807_0_1, dd_Smed_v6_7807_0_1, [RH, Score=394, Expect=6e-118]} {RNA1509_44126} {RNA1310_6529} {RNA815_26058}
78. MligTC455_10011 57 1.19 Mlig455_035695, Mlig455_035789

Neo: -

Age: Down-Down-Up

Region-enriched R4: 5.860/0.00791

 1.702 0.717 0.985 - - - -

Mlig455_035695 {REF} {Length: 1462} {RNA1509_59374} {RNA1310_38389} {RNA815_25965}

Mlig455_035789 {REF} {Length: 1216} {RNA1310_38389} {RNA815_25965}
79. MligTC455_05809 23 0.48 Mlig455_017165, Mlig455_048115

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.378/0.02273

 1.699 0.966 0.733 - - - -

Mlig455_017165 {REF} {Length: 910} {RNA1509_46071} {RNA1310_122976} {RNA815_41352}

Mlig455_048115 {REF} {Length: 991} {RNA1509_13122} {RNA1310_122976} {RNA815_39088}
80. MligTC455_36956 34 0.71 Mlig455_045269

Neo: -

Age: -

 NKX6-2 1.692 - 0.959 - - 0.733 - Mlig455_045269 {REF} {Length: 2400} {Pfam: Homeodomain [PF00046.31, score=73.7]; Rapid ALkalinization Factor (RALF) [PF05498.13, score=22.7]} {Human: ENSG00000148826, NKX6-2, NK6 homeobox 2, [Score=98.2, Expect=5e-22]} {Mouse: ENSMUSG00000041309, Nkx6-2, NK6 homeobox 2, [Score=96.3, Expect=1e-21]; ENSMUSG00000067438, Hmx1, H6 homeobox 1, [Score=93.2, Expect=4e-20]; ENSMUSG00000035187, Nkx6-1, NK6 homeobox 1, [Score=93.2, Expect=6e-20]; ENSMUSG00000040148, Hmx3, H6 homeobox 3, [Score=92.4, Expect=1e-19]; ENSMUSG00000050100, Hmx2, H6 homeobox 2, [Score=92.0, Expect=4e-20]} {Dmel: FBgn0024321, NK7.1, [RH, Score=129, Expect=9e-31]} {Celegans: WBGene00000434, ceh-9, Homeobox protein ceh-9, [RH, Score=102, Expect=2e-25]} {Smed: dd_Smed_v6_18719_0_1, dd_Smed_v6_18719_0_1, [Score=84.0, Expect=1e-17]} {RNA1310_72056}
81. MligTC455_22557 229 4.78 Mlig455_002029, Mlig455_003232, Mlig455_006804, Mlig455_015180, Mlig455_015979, Mlig455_015999, Mlig455_016961, Mlig455_024995, Mlig455_025010, Mlig455_026120, Mlig455_031658, Mlig455_046569, Mlig455_055577

Neo: Germline

Age: -

Region-specific R4: 5.812

Region-enriched R2: 4.203/0.02258
Region-enriched R4: 2.854/0.04254

 KIAA1958 1.684 - 0.711 - - 0.973 -

Mlig455_002029 {REF} {Length: 441} {RNA1509_2129} {RNA1310_24155.3} {RNA815_47779}

Mlig455_003232 {REF} {Length: 1231} {RNA1509_2129} {RNA1310_24155.2} {RNA815_14068}

Mlig455_006804 {REF} {Length: 554} {RNA1509_2129} {RNA1310_24155.3} {RNA815_47779}

Mlig455_015180 {REF} {Length: 528} {RNA1509_2129} {RNA1310_24155.3} {RNA815_47779}

Mlig455_015979 {REF} {Length: 1879} {RNA1509_2129} {RNA1310_41170.1} {RNA815_47779}

Mlig455_015999 {REF} {Length: 576} {RNA1509_2129} {RNA1310_24155.3} {RNA815_47779}

Mlig455_016961 {REF} {Length: 595} {NoTransDecoderORF} {RNA1509_2129} {RNA1310_24155.2} {RNA815_47779}

Mlig455_024995 {REF} {Length: 1636} {RNA1509_2129} {RNA1310_24155.2} {RNA815_14068}

Mlig455_025010 {REF} {Length: 745} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_2129} {RNA1310_24155.3} {RNA815_47779}

Mlig455_026120 {REF} {Length: 554} {RNA1509_2129} {RNA1310_25538} {RNA815_47779}

Mlig455_031658 {REF} {Length: 2676} {TRANSSPLICED} {Pfam: Phage integrase family [PF00589.24, score=38.5]; Domain of unknown function (DUF3504) [PF12012.10, score=22.2]} {Human: ENSG00000165185, KIAA1958, KIAA1958, [Score=55.1, Expect=2e-07]} {Mouse: ENSMUSG00000045071, E130308A19Rik, RIKEN cDNA E130308A19 gene, [Score=55.8, Expect=6e-08]} {RNA1509_53592} {RNA1310_25538} {RNA815_14068}

Mlig455_046569 {REF} {Length: 1742} {RNA1509_2129} {RNA1310_32796} {RNA815_14068}

Mlig455_055577 {REF} {Length: 800} {RNA1509_2129} {RNA1310_24155.2} {RNA815_14068}
82. MligTC455_38522 12 0.24 Mlig455_020242

Neo: Germline

Age: -

 1.68 0.963 0.717 - - - - Mlig455_020242 {REF} {Length: 825} {NoTransDecoderORF} {RNA1509_37759} {RNA1310_139073} {RNA815_13148}
83. MligTC455_33369 20 0.42 Mlig455_066578

Neo: Irradiation

Age: -

 1.674 0.950 0.724 - - - - Mlig455_066578 {REF} {Length: 4889} {RNA1509_7306} {RNA1310_20019} {RNA815_3069.1}
84. MligTC455_06920 64 1.33 Mlig455_030382

Neo: Germline

Age: -

Region-enriched R4: 3.121/0.01836

 1.664 0.710 0.954 - - - - Mlig455_030382 {REF} {Length: 1405} {RNA1509_54678} {RNA1310_47150, RNA1509_54678} {RNA1509_54678, RNA815_42356}
85. MligTC455_07677 29 0.61 Mlig455_064681

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_064681 {REF} {Length: 1108} {Pfam: Domain of unknown function (DUF1967) [PF09269.13, score=25.7]}
86. MligTC455_10507 15 0.31 Mlig455_000011

Neo: -

Age: -

 0.998 - - - - 0.998 - Mlig455_000011 {REF} {Length: 1370} {RNA1509_48973} {RNA1310_38998.3} {RNA815_31898}
87. MligTC455_05507 7 0.14 Mlig455_059815

Neo: -

Age: -

 DEF8 0.994 - - - - 0.994 - Mlig455_059815 {REF} {Length: 2030} {Pfam: Putative zinc-RING and/or ribbon [PF13901.8, score=76.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=25.5]; C1 domain [PF03107.18, score=23.2]} {Human: ENSG00000140995, DEF8, differentially expressed in FDCP 8 homolog, [Score=59.3, Expect=7e-09]} {Mouse: ENSMUSG00000001482, Def8, differentially expressed in FDCP 8, [Score=59.7, Expect=4e-09]} {Dmel: FBgn0046296, CG11534, [RH, Score=82.4, Expect=1e-16]} {Celegans: WBGene00013235, Y56A3A.16, [RH, Score=60.8, Expect=1e-09]}
88. MligTC455_05748 55 1.14 Mlig455_030842

Neo: -

Age: -

 0.994 - - - - 0.994 - Mlig455_030842 {REF} {Length: 531} {RNA1509_15634} {RNA1310_60348} {RNA815_35182}
89. MligTC455_27714 19 0.39 Mlig455_055770

Neo: Irradiation

Age: Up-Down-Down

 0.994 - - - - - 0.994 Mlig455_055770 {REF} {Length: 3827} {Pfam: F5/8 type C domain [PF00754.27, score=27.1]} {RNA1509_55008} {RNA1310_30433, RNA1509_55008}
90. MligTC455_38047 12 0.25 Mlig455_042187, Mlig455_059009

Neo: -

Age: -

 0.994 - - - - 0.994 -

Mlig455_042187 {REF} {Length: 374} {NoTransDecoderORF} {RNA1509_4618} {RNA1310_17333} {RNA815_9866.2}

Mlig455_059009 {REF} {Length: 1388} {Pfam: PAN domain [PF14295.8, score=18.8]} {RNA1509_48973} {RNA1310_27015.1} {RNA815_36286}
91. MligTC455_34525 52 1.08 Mlig455_021566

Neo: -

Age: Down-Up-Down

 GNAI1 0.993 - - - - 0.993 - Mlig455_021566 {REF} {Length: 3532} {Pfam: G-protein alpha subunit [PF00503.22, score=404.9]; ADP-ribosylation factor family [PF00025.23, score=56.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=20.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.4]} {Human: ENSG00000127955, GNAI1, G protein subunit alpha i1, [Score=486, Expect=2e-171]; ENSG00000114353, GNAI2, G protein subunit alpha i2, [Score=481, Expect=3e-169]; ENSG00000065135, GNAI3, G protein subunit alpha i3, [Score=474, Expect=1e-166]} {Mouse: ENSMUSG00000057614, Gnai1, guanine nucleotide binding protein (G protein), alpha inhibiting 1, [Score=486, Expect=2e-171]; ENSMUSG00000032562, Gnai2, guanine nucleotide binding protein (G protein), alpha inhibiting 2, [Score=475, Expect=5e-167]; ENSMUSG00000000001, Gnai3, guanine nucleotide binding protein (G protein), alpha inhibiting 3, [Score=474, Expect=1e-166]} {Dmel: FBgn0001104, Galphai, G protein alpha i subunit, [Score=468, Expect=2e-164]} {Celegans: WBGene00001648, goa-1, Guanine nucleotide-binding protein G(o) subunit alpha, [Score=446, Expect=5e-156]} {Smed: dd_Smed_v6_12112_0_1, dd_Smed_v6_12112_0_1, [RH, Score=598, Expect=0.0]} {RNA1509_45426} {RNA1310_26920, RNA1509_45426} {RNA1509_45426, RNA815_11718}
92. MligTC455_00471 11 0.24 Mlig455_019711

Neo: -

Age: -

 0.992 - - - - 0.992 - Mlig455_019711 {REF} {Length: 118} {NoTransDecoderORF} {RNA1509_44121} {RNA815_21965}
93. MligTC455_17321 10 0.21 Mlig455_056084

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.089

 0.992 - - - - 0.992 - Mlig455_056084 {REF} {Length: 3976} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=25.9]; Ankyrin repeats (many copies) [PF13857.8, score=25.5]; Ankyrin repeat [PF00023.32, score=25.3]; Ankyrin repeat [PF13606.8, score=22.5]; Ankyrin repeats (many copies) [PF13637.8, score=20.0]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=54.3, Expect=4e-07]} {RNA1509_34786} {RNA1310_3679.2, RNA1509_34786} {RNA1509_34786, RNA815_15539}
94. MligTC455_00002 4 0.08 Mlig455_047553

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_047553 {REF} {Length: 428} {NoTransDecoderORF} {RNA1509_12879} {RNA1310_633} {RNA815_21871}
95. MligTC455_09967 35 0.73 Mlig455_036501

Neo: Germline

Age: Up-Down-Down

 FAM78A 0.991 - 0.991 - - - - Mlig455_036501 {REF} {Length: 2139} {Human: ENSG00000126882, FAM78A, family with sequence similarity 78 member A, [Score=54.3, Expect=1e-07]} {Mouse: ENSMUSG00000050592, Fam78a, family with sequence similarity 78, member A, [Score=53.9, Expect=1e-07]} {RNA1310_22983.1} {RNA815_35701}
96. MligTC455_01454 6 0.13 Mlig455_069220

Neo: Germline

Age: -

 0.99 - - - - 0.990 - Mlig455_069220 {REF} {Length: 472}
97. MligTC455_00070 11 0.23 Mlig455_053401

Neo: -

Age: -

 0.989 - - - - 0.989 - Mlig455_053401 {REF} {Length: 541} {NoTransDecoderORF}
98. MligTC455_10474 25 0.51 Mlig455_031069

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.130

 0.989 - 0.989 - - - - Mlig455_031069 {REF} {Length: 1628} {RNA1509_14834} {RNA1310_20323} {RNA815_20717}
99. MligTC455_17284 28 0.58 Mlig455_021795

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.028

 0.987 - - - - - 0.987 Mlig455_021795 {REF} {Length: 3140} {RNA1509_16895} {RNA1310_22424.1} {RNA815_3739}
100. MligTC455_13832 178 3.71 Mlig455_065431

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_065431 {REF} {Length: 1865} {NoTransDecoderORF} {RNA1509_9010} {RNA1310_38702, RNA1509_9010} {RNA1509_9010, RNA815_4929.1}

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