M. lignano Tomo-Seq
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Results for MligTC455_13762

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13762 28 0.58 Mlig455_003517

Neo: -

Age: -

 Mlig455_003517 {REF} {Length: 1481} {RNA1509_50908} {RNA1310_60543} {RNA815_37583}

Cumulative graph for MligTC455_13762

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.949 0.72 0.99988 1.00000
RegionR2 2.489 0.72 0.99986 1.00000
RegionR3 0.097 0.72 0.99989 1.00000
RegionR4 -2.759 0.72 0.99979 1.00000
RegionR5 -1.085 0.72 0.99995 1.00000
RegionR6 -0.342 0.72 0.99993 1.00000
RegionR7 1.301 0.72 0.99995 1.00000
RegionR8 2.248 0.72 0.99991 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.833 0.72 0.99991 1.00000
RegenerationR2 0.658 0.72 0.99995 1.00000
RegenerationR3 0.556 0.72 0.99993 1.00000
RegenerationR4 1.023 0.72 1.00000 1.00000
RegenerationR5 1.693 0.72 0.99984 1.00000
RegenerationR6 3.663 0.72 0.99974 1.00000
RegenerationBL 3.065 0.72 0.99985 1.00000
RegenerationTP 1.636 0.72 0.99976 1.00000


Genes with expression patterns similar to MligTC455_13762

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13762 28 0.58 Mlig455_003517

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_003517 {REF} {Length: 1481} {RNA1509_50908} {RNA1310_60543} {RNA815_37583}
2. MligTC455_46945 992 20.68 Mlig455_025688

Neo: Neoblast, stringent

Age: Down-Down-Up

Region-enriched R6: 3.040/0.00002

Regeneration-upregulated BL: 2.709

Regeneration-enriched BL: 2.709

 RREB1 0.962 - - - - 0.962 - Mlig455_025688 {REF} {Length: 2364} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=50.3]; C2H2-type zinc finger [PF13894.8, score=45.1]; Zinc-finger double domain [PF13465.8, score=38.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=21.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.1]} {Human: ENSG00000124782, RREB1, ras responsive element binding protein 1, [RH, Score=104, Expect=1e-22]} {Mouse: ENSMUSG00000039087, Rreb1, ras responsive element binding protein 1, [RH, Score=101, Expect=9e-22]} {Dmel: FBgn0003053, peb, pebbled, [Score=95.5, Expect=5e-20]} {Celegans: WBGene00018567, F47E1.3, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_10103_0_1, dd_Smed_v6_10103_0_1, [RH, Score=122, Expect=9e-30]} {RNA1509_41001, RNA1509_53538} {RNA1310_12985.1, RNA1509_41001, RNA1509_53538} {RNA1509_41001, RNA1509_53538, RNA815_27232}
3. MligTC455_30147 105 2.19 Mlig455_034818, Mlig455_034833

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_034818 {REF} {Length: 291} {NoTransDecoderORF} {RNA1310_130891} {RNA815_48191}

Mlig455_034833 {REF} {Length: 282} {NoTransDecoderORF} {RNA1310_130891} {RNA815_48191}
4. MligTC455_16918 1218 25.38 Mlig455_039085, Mlig455_042780

Neo: -

Age: Up-Down-Down

Region-enriched R8: 5.308/0.00000
Region-enriched R7: 3.471/0.00026

 MECOM 0.95 - - - - 0.950 -

Mlig455_039085 {REF} {Length: 4916} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=99.3]; C2H2-type zinc finger [PF13894.8, score=76.6]; Zinc-finger double domain [PF13465.8, score=72.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=41.2]; C2H2-type zinc finger [PF13912.8, score=35.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=25.5]; Zinc-finger of C2H2 type [PF12874.9, score=20.9]; C2H2-type zinc-finger domain [PF13909.8, score=18.4]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=147, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=145, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=146, Expect=2e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=146, Expect=9e-35]} {Dmel: FBgn0045852, ham, hamlet, [RH, Score=149, Expect=1e-36]} {Celegans: WBGene00015646, mlt-10, [Score=172, Expect=3e-44]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}

Mlig455_042780 {REF} {Length: 3778} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.4]; Zinc-finger double domain [PF13465.8, score=59.4]; C2H2-type zinc finger [PF13894.8, score=36.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=29.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.0]; C2H2-type zinc finger [PF13912.8, score=28.6]; Zinc-finger of C2H2 type [PF12874.9, score=24.8]; C2H2-type zinc-finger domain [PF13909.8, score=21.2]; GAGA factor [PF09237.13, score=19.5]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=18.9]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=3e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=140, Expect=1e-34]} {Dmel: FBgn0032707, CG10348, [RH, Score=144, Expect=8e-37]} {Celegans: WBGene00001207, egl-43, Egl-43, [RH, Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=144, Expect=9e-39]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}

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