Data search
Results for MligTC455_13765
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13765 | 435 | 9.07 | Mlig455_010820 | Neo: Int S/G2/M Age: Down-Up-Up |
Mlig455_010820 {REF} {Length: 608} {TRANSSPLICED} {Pfam: NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [PF15880.7, score=49.8]} {RNA1509_19632} {RNA1310_58176.1} {RNA815_30529} |
Cumulative graph for MligTC455_13765
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.071 | 3.668 | 0.45669 | 1.00000 | |
| RegionR2 | -1.195 | 3.668 | 0.99230 | 1.00000 | |
| RegionR3 | 1.069 | 3.668 | 0.38133 | 0.91290 | |
| RegionR4 | 2.646 | 3.668 | 0.06221 | 0.22366 | |
| RegionR5 | 0.917 | 3.668 | 0.44010 | 0.80101 | |
| RegionR6 | 0.086 | 3.668 | 0.83558 | 1.00000 | |
| RegionR7 | 0.862 | 3.668 | 0.50308 | 1.00000 | |
| RegionR8 | -0.313 | 3.668 | 0.93471 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.828 | 3.668 | 0.99982 | 1.00000 | |
| RegenerationR2 | 0.775 | 3.668 | 0.49486 | 0.86928 | |
| RegenerationR3 | -0.428 | 3.668 | 0.70800 | 0.95081 | |
| RegenerationR4 | 0.018 | 3.668 | 0.99782 | 1.00000 | |
| RegenerationR5 | 0.839 | 3.668 | 0.48013 | 0.84669 | |
| RegenerationR6 | 0.915 | 3.668 | 0.45794 | 0.77619 | |
| RegenerationBL | 0.545 | 3.668 | 0.64820 | 0.98540 | |
| RegenerationTP | 1.444 | 3.668 | 0.24647 | 0.69372 |
Genes with expression patterns similar to MligTC455_13765
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13765 | 435 | 9.07 | Mlig455_010820 | Neo: Int S/G2/M Age: Down-Up-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_010820 {REF} {Length: 608} {TRANSSPLICED} {Pfam: NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [PF15880.7, score=49.8]} {RNA1509_19632} {RNA1310_58176.1} {RNA815_30529} | |
| 2. | MligTC455_20593 | 717 | 14.93 | Mlig455_013609 | Neo: - Age: - |
TVP23B | 1.765 | - | - | - | - | 0.804 | 0.961 | Mlig455_013609 {REF} {Length: 2266} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF846) [PF05832.14, score=165.1]} {Human: ENSG00000171928, TVP23B, trans-golgi network vesicle protein 23 homolog B, [RH, Score=184, Expect=3e-58]; ENSG00000175106, TVP23C, trans-golgi network vesicle protein 23 homolog C, [RH, Score=184, Expect=6e-58]} {Mouse: ENSMUSG00000014177, Tvp23b, trans-golgi network vesicle protein 23B, [RH, Score=186, Expect=7e-59]} {Dmel: FBgn0035944, CG5021, [RH, Score=174, Expect=4e-54]} {Celegans: WBGene00016400, C34D4.4, Uncharacterized Golgi apparatus membrane protein-like protein C34D4.4, [RH, Score=127, Expect=2e-36]} {Smed: dd_Smed_v6_3386_0_1, dd_Smed_v6_3386_0_1, [RH, Score=160, Expect=2e-49]} {RNA1509_36306, RNA1509_47142, RNA1509_52712, RNA1509_56436, RNA1509_7370} {RNA1310_32400, RNA1509_36306, RNA1509_47142, RNA1509_52712, RNA1509_56436, RNA1509_7370} {RNA1509_36306, RNA1509_47142, RNA1509_52712, RNA1509_56436, RNA1509_7370, RNA815_15068} |
| 3. | MligTC455_30684 | 2503 | 52.14 | Mlig455_025378 | Neo: - Age: logFC(26M/2M)=0.382 Region-enriched R4: 2.886/0.00001 Regeneration-upregulated TP: 2.763 Regeneration-enriched TP: 2.763 |
1.721 | 0.769 | - | - | - | - | 0.952 | Mlig455_025378 {REF} {Length: 1646} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=105.8]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=122, Expect=4e-36]} {RNA1509_2351, RNA1509_676, RNA1509_7011} {RNA1310_26438, RNA1509_2351, RNA1509_676, RNA1509_7011} {RNA1509_2351, RNA1509_676, RNA1509_7011, RNA815_11417.1} | |
| 4. | MligTC455_50713 | 1646 | 34.29 | Mlig455_004991 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.627 Region-enriched R5: 1.244/0.00002 |
MAP1LC3C | 0.963 | - | - | - | - | - | 0.963 | Mlig455_004991 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=130.5]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=20.0]} {Human: ENSG00000197769, MAP1LC3C, microtubule associated protein 1 light chain 3 gamma, [Score=150, Expect=4e-47]} {Mouse: ENSMUSG00000031812, Map1lc3b, microtubule-associated protein 1 light chain 3 beta, [Score=125, Expect=6e-38]; ENSMUSG00000027602, Map1lc3a, microtubule-associated protein 1 light chain 3 alpha, [Score=122, Expect=9e-37]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=98.6, Expect=2e-27]} {Celegans: WBGene00002981, lgg-2, [RH, Score=107, Expect=8e-31]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [Score=104, Expect=9e-30]} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1310_32049.1, RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101, RNA815_14707} |
| 5. | MligTC455_30308 | 112 | 2.34 | Mlig455_064892 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.615 Region-enriched R3: 4.002/0.00001 |
ANKRD28 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_064892 {REF} {Length: 5718} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=153.9]; Ankyrin repeats (many copies) [PF13637.8, score=105.2]; Ankyrin repeats (many copies) [PF13857.8, score=66.3]; Ankyrin repeat [PF13606.8, score=56.3]; Ankyrin repeat [PF00023.32, score=52.9]; Ankyrin ubiquitin-binding domain [PF18418.3, score=28.5]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=64.3, Expect=5e-10]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=63.9, Expect=7e-10]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=62.4, Expect=2e-09]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=77.4, Expect=4e-14]} {Dmel: FBgn0029137, Patsas, [Score=52.8, Expect=9e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=72.4, Expect=7e-13]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=49.7, Expect=6e-06]} {RNA1509_40476, RNA1509_49250, RNA1509_51982} {RNA1310_19601.2, RNA1509_40476, RNA1509_51982} {RNA1509_40476, RNA1509_51982, RNA815_2803.1} |
| 6. | MligTC455_12593 | 435 | 9.05 | Mlig455_001017, Mlig455_064255 | Neo: Irradiation Age: - Region-specific R5: 4.552 Region-enriched R5: 3.735/0.00000 |
OVCH1, TMPRSS7 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_001017 {REF} {Length: 2588} {Pfam: CUB domain [PF00431.22, score=66.2]; Low-density lipoprotein receptor domain class A [PF00057.20, score=62.9]; Trypsin [PF00089.28, score=26.2]} {Human: ENSG00000176040, TMPRSS7, transmembrane serine protease 7, [Score=86.7, Expect=3e-18]; ENSG00000187045, TMPRSS6, transmembrane serine protease 6, [Score=82.4, Expect=7e-17]} {Mouse: ENSMUSG00000033177, Tmprss7, transmembrane serine protease 7, [Score=88.6, Expect=5e-19]; ENSMUSG00000031995, St14, suppression of tumorigenicity 14 (colon carcinoma), [Score=84.3, Expect=1e-17]} {Dmel: FBgn0066101, LpR1, Lipophorin receptor 1, [Score=73.2, Expect=5e-14]} {Celegans: WBGene00020481, T13C2.6, [Score=73.9, Expect=2e-14]} {Smed: dd_Smed_v6_9829_0_1, dd_Smed_v6_9829_0_1, [Score=58.9, Expect=1e-09]} {RNA1509_47790} {RNA1310_12212.1} {RNA815_13365} Mlig455_064255 {REF} {Length: 2400} {Pfam: Trypsin [PF00089.28, score=246.4]; Low-density lipoprotein receptor domain class A [PF00057.20, score=65.2]; CUB domain [PF00431.22, score=65.1]; Trypsin-like peptidase domain [PF13365.8, score=29.0]; Domain of unknown function (DUF1986) [PF09342.13, score=24.6]} {Human: ENSG00000187950, OVCH1, ovochymase 1, [RH, Score=209, Expect=5e-58]} {Mouse: ENSMUSG00000016942, Tmprss6, transmembrane serine protease 6, [RH, Score=224, Expect=2e-64]} {Dmel: FBgn0042098, CG18735, [RH, Score=185, Expect=1e-53]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [RH, Score=165, Expect=6e-47]} {Smed: dd_Smed_v6_790_0_1, dd_Smed_v6_790_0_1, [Score=179, Expect=3e-48]} {RNA1509_27528, RNA1509_57567} {RNA1310_12212.1, RNA1509_27528, RNA1509_57567} {RNA1509_27528, RNA1509_57567, RNA815_13365} |
| 7. | MligTC455_20817 | 3963 | 82.56 | Mlig455_002515 | Neo: - |
PURB | 0.953 | - | - | - | - | - | 0.953 | Mlig455_002515 {REF} {Length: 1714} {TRANSSPLICED} {Pfam: PurA ssDNA and RNA-binding protein [PF04845.15, score=272.4]; Protein of unknown function (DUF3276) [PF11680.10, score=26.2]} {Human: ENSG00000146676, PURB, purine rich element binding protein B, [RH, Score=192, Expect=1e-59]; ENSG00000185129, PURA, purine rich element binding protein A, [RH, Score=190, Expect=1e-58]} {Mouse: ENSMUSG00000043991, Pura, purine rich element binding protein A, [RH, Score=190, Expect=7e-59]; ENSMUSG00000094483, Purb, purine rich element binding protein B, [RH, Score=189, Expect=9e-59]} {Dmel: FBgn0022361, Pur-alpha, Purine-rich binding protein-alpha, [RH, Score=239, Expect=6e-79]} {Celegans: WBGene00004046, plp-1, Pur alpha Like Protein, [RH, Score=146, Expect=2e-43]} {Smed: dd_Smed_v6_346_0_1, dd_Smed_v6_346_0_1, [RH, Score=256, Expect=3e-86]} {RNA1509_44271} {RNA1310_11913} {RNA815_4181.1} |
Berezikov Lab - 2020-2021 © ERIBA