Data search
Results for MligTC455_13821
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13821 | 615 | 12.81 | Mlig455_031439 | Neo: - Age: - Regeneration-upregulated BL: 2.668 Regeneration-enriched BL: 2.668 |
Mlig455_031439 {REF} {Length: 2094} {NoTransDecoderORF} {RNA1509_52990} {RNA1310_21161} {RNA815_2664} |
Cumulative graph for MligTC455_13821
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.691 | 3.831 | 0.58302 | 1.00000 | |
| RegionR2 | 0.406 | 3.831 | 0.51544 | 0.89174 | |
| RegionR3 | 0.571 | 3.831 | 0.27056 | 0.81510 | |
| RegionR4 | -0.1 | 3.831 | 0.87749 | 1.00000 | |
| RegionR5 | 0.604 | 3.831 | 0.20016 | 0.49061 | |
| RegionR6 | 0.341 | 3.831 | 0.53063 | 1.00000 | |
| RegionR7 | -2.511 | 3.831 | 0.02363 | 0.28750 | |
| RegionR8 | -0.004 | 3.831 | 0.99835 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.076 | 3.831 | 0.54678 | 1.00000 | |
| RegenerationR2 | 0.443 | 3.831 | 0.39567 | 0.81217 | |
| RegenerationR3 | 1.426 | 3.831 | 0.00776 | 0.16139 | |
| RegenerationR4 | 1.341 | 3.831 | 0.01370 | 0.18265 | |
| RegenerationR5 | 0.682 | 3.831 | 0.17465 | 0.60397 | |
| RegenerationR6 | 1.089 | 3.831 | 0.05405 | 0.29134 | |
| RegenerationBL | 2.668 | 3.831 | 0.00002 | 0.00155 | Specific for BL: 2.668 |
| RegenerationTP | 2.212 | 3.831 | 0.00916 | 0.16120 |
Genes with expression patterns similar to MligTC455_13821
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13821 | 615 | 12.81 | Mlig455_031439 | Neo: - Age: - Regeneration-upregulated BL: 2.668 Regeneration-enriched BL: 2.668 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031439 {REF} {Length: 2094} {NoTransDecoderORF} {RNA1509_52990} {RNA1310_21161} {RNA815_2664} | |
| 2. | MligTC455_09826 | 156 | 3.26 | Mlig455_056834 | Neo: - Age: Down-Up-Down |
1.697 | 0.738 | - | 0.959 | - | - | - | Mlig455_056834 {REF} {Length: 1255} {TRANSSPLICED} {RNA1310_44102} {RNA815_12654} | |
| 3. | MligTC455_24378 | 515 | 10.72 | Mlig455_003533, Mlig455_015528 | Neo: - Age: Up-Down-Down |
1.665 | - | - | 0.953 | - | - | 0.712 | Mlig455_003533 {REF} {Length: 8827} {Pfam: Vacuolar sorting-associated protein 13, N-terminal [PF16908.7, score=24.8]} {RNA1509_7411} {RNA1310_661.1} {RNA815_2109} Mlig455_015528 {REF} {Length: 9022} {Pfam: Vacuolar sorting-associated protein 13, N-terminal [PF16908.7, score=27.0]} {RNA1509_7411} {RNA1310_661.1} {RNA815_2109} |
|
| 4. | MligTC455_37726 | 70 | 1.46 | Mlig455_058690 | Neo: - Age: - Region-enriched R4: 4.625/0.04727 |
0.967 | - | - | 0.967 | - | - | - | Mlig455_058690 {REF} {Length: 3017} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_103756} {RNA815_8730.1} | |
| 5. | MligTC455_27324 | 118 | 2.45 | Mlig455_045818 | Neo: Irradiation Age: Up-Down-Up Region-enriched R4: 4.088/0.01215 |
ANKRA2 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_045818 {REF} {Length: 2713} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=46.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.6]; Ankyrin repeat [PF13606.8, score=33.7]; Ankyrin repeats (many copies) [PF13857.8, score=26.4]; Ankyrin repeat [PF00023.32, score=24.1]} {Human: ENSG00000164331, ANKRA2, ankyrin repeat family A member 2, [Score=50.8, Expect=8e-07]; ENSG00000085185, BCORL1, BCL6 corepressor like 1, [Score=50.1, Expect=2e-06]; ENSG00000145362, ANK2, ankyrin 2, [Score=49.7, Expect=4e-06]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=53.5, Expect=1e-07]; ENSMUSG00000036959, Bcorl1, BCL6 co-repressor-like 1, [Score=51.6, Expect=4e-07]} {Dmel: FBgn0086898, dgo, diego, [Score=57.4, Expect=4e-09]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=66.6, Expect=2e-12]} {RNA1509_52102} {RNA1310_40022} {RNA815_16446} |
| 6. | MligTC455_47672 | 202 | 4.2 | Mlig455_048911 | Neo: - Age: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_048911 {REF} {Length: 2349} {NoTransDecoderORF} {RNA1509_39738} {RNA1310_13264.1} {RNA815_19551.1} | |
| 7. | MligTC455_49612 | 183 | 3.81 | Mlig455_022034 | Neo: Int S/G2/M Age: - |
YY1 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_022034 {REF} {Length: 2220} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=55.1]; Zinc-finger double domain [PF13465.8, score=53.9]; C2H2-type zinc finger [PF13894.8, score=43.6]; C2H2-type zinc finger [PF13912.8, score=22.8]; FOXP coiled-coil domain [PF16159.7, score=19.0]} {Human: ENSG00000100811, YY1, YY1 transcription factor, [RH, Score=157, Expect=2e-46]} {Mouse: ENSMUSG00000021264, Yy1, YY1 transcription factor, [RH, Score=157, Expect=2e-46]; ENSMUSG00000046873, Mbtps2, membrane-bound transcription factor peptidase, site 2, [RH, Score=152, Expect=9e-45]; ENSMUSG00000091736, Yy2, Yy2 transcription factor, [RH, Score=152, Expect=9e-45]} {Dmel: FBgn0002521, pho, pleiohomeotic, [RH, Score=157, Expect=1e-45]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=84.3, Expect=8e-20]} {Smed: dd_Smed_v6_10092_0_1, dd_Smed_v6_10092_0_1, [RH, Score=152, Expect=3e-44]} {RNA1509_14200} {RNA1310_37487} {RNA815_5365} |
| 8. | MligTC455_47729 | 324 | 6.75 | Mlig455_046078 | Neo: - Age: - |
DHX37 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_046078 {REF} {Length: 3257} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=74.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=49.6]; Helicase conserved C-terminal domain [PF00271.33, score=44.3]; DEAD/DEAH box helicase [PF00270.31, score=40.6]; AAA domain [PF13604.8, score=21.5]; AAA domain [PF13245.8, score=20.0]} {Human: ENSG00000150990, DHX37, DEAH-box helicase 37, [RH, Score=615, Expect=0.0]} {Mouse: ENSMUSG00000029480, Dhx37, DEAH (Asp-Glu-Ala-His) box polypeptide 37, [RH, Score=635, Expect=0.0]} {Dmel: FBgn0001330, kz, kurz, [RH, Score=649, Expect=0.0]} {Celegans: WBGene00015525, rha-2, Putative ATP-dependent RNA helicase rha-2, [RH, Score=556, Expect=3e-180]} {Smed: dd_Smed_v6_10340_0_1, dd_Smed_v6_10340_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_10043} {RNA1310_4392} {RNA815_1308.1} |
| 9. | MligTC455_11245 | 531 | 11.07 | Mlig455_056702, Mlig455_060320 | Neo: - |
0.958 | - | - | 0.958 | - | - | - | Mlig455_056702 {REF} {Length: 1328} {RNA1509_32947} {RNA1310_19611} {RNA815_10245.1} Mlig455_060320 {REF} {Length: 1950} {RNA1509_32947, RNA1509_43462} {RNA1310_19611, RNA1509_32947, RNA1509_43462} {RNA1509_32947, RNA1509_43462, RNA815_18845} |
|
| 10. | MligTC455_36387 | 148 | 3.09 | Mlig455_029042 | Neo: - Age: Up-Down-Up Region-enriched R3: 2.839/0.03586 |
0.953 | - | - | 0.953 | - | - | - | Mlig455_029042 {REF} {Length: 10728} {Pfam: Fibronectin type III domain [PF00041.23, score=37.0]; Protein of unknown function (DUF642) [PF04862.14, score=21.4]} {RNA1509_16204} {RNA1310_5941.1} {RNA815_7810} | |
| 11. | MligTC455_50081 | 185 | 3.86 | Mlig455_003360 | Neo: - Age: - Region-enriched R5: 1.411/0.02349 |
SLC26A2 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_003360 {REF} {Length: 3619} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=290.1]; STAS domain [PF01740.23, score=73.8]} {Human: ENSG00000155850, SLC26A2, solute carrier family 26 member 2, [Score=324, Expect=1e-99]} {Mouse: ENSMUSG00000034320, Slc26a2, solute carrier family 26 (sulfate transporter), member 2, [Score=339, Expect=1e-105]} {Dmel: FBgn0036770, Prestin, [Score=259, Expect=8e-76]} {Celegans: WBGene00010789, sulp-5, SULfate Permease family, [Score=337, Expect=3e-105]} {Smed: dd_Smed_v6_16869_0_1, dd_Smed_v6_16869_0_1, [RH, Score=411, Expect=4e-136]} {RNA1509_41170} {RNA1310_5023} {RNA815_2998.1} |
| 12. | MligTC455_17161 | 305 | 6.35 | Mlig455_005978 | Neo: - |
FAM20B | 0.952 | - | - | 0.952 | - | - | - | Mlig455_005978 {REF} {Length: 2922} {TRANSSPLICED} {Pfam: Golgi casein kinase, C-terminal, Fam20 [PF06702.14, score=172.6]; Ribosomal protein L6e [PF01159.21, score=113.2]; Ribosomal protein L6, N-terminal domain [PF03868.17, score=21.8]} {Human: ENSG00000116199, FAM20B, FAM20B, glycosaminoglycan xylosylkinase, [RH, Score=224, Expect=1e-65]} {Mouse: ENSMUSG00000033557, Fam20b, family with sequence similarity 20, member B, [RH, Score=219, Expect=8e-64]} {Dmel: FBgn0039857, RpL6, Ribosomal protein L6, [RH, Score=211, Expect=6e-63]} {Celegans: WBGene00010356, H03A11.1, Extracellular serine/threonine protein kinase CeFam20, [RH, Score=153, Expect=1e-39]} {Smed: dd_Smed_v6_839_0_1, dd_Smed_v6_839_0_1, [RH, Score=170, Expect=1e-47]} {RNA1509_31893} {RNA1310_20853} {RNA815_8370} |
| 13. | MligTC455_17927 | 93 | 1.94 | Mlig455_032418 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_032418 {REF} {Length: 1642} {RNA1509_37387} {RNA1310_26813.2, RNA1509_37387} {RNA1509_37387, RNA815_23526} | |
| 14. | MligTC455_43218 | 137 | 2.86 | Mlig455_025977 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_025977 {REF} {Length: 1409} {NoTransDecoderORF} {RNA1509_59012} {RNA1310_127643} | |
| 15. | MligTC455_17160 | 332 | 6.92 | Mlig455_003949 | Neo: - |
FAM20B | 0.95 | - | - | 0.950 | - | - | - | Mlig455_003949 {REF} {Length: 3341} {TRANSSPLICED} {Pfam: Golgi casein kinase, C-terminal, Fam20 [PF06702.14, score=172.2]; Ribosomal protein L6e [PF01159.21, score=113.1]; Ribosomal protein L6, N-terminal domain [PF03868.17, score=21.8]} {Human: ENSG00000116199, FAM20B, FAM20B, glycosaminoglycan xylosylkinase, [RH, Score=224, Expect=2e-65]} {Mouse: ENSMUSG00000033557, Fam20b, family with sequence similarity 20, member B, [RH, Score=218, Expect=2e-63]} {Dmel: FBgn0039857, RpL6, Ribosomal protein L6, [RH, Score=211, Expect=6e-63]} {Celegans: WBGene00004417, rpl-6, 60S ribosomal protein L6, [Score=143, Expect=7e-39]} {Smed: dd_Smed_v6_839_0_1, dd_Smed_v6_839_0_1, [RH, Score=170, Expect=2e-47]} {RNA1509_31893, RNA1509_34793} {RNA1310_20853, RNA1509_34793} {RNA1509_34793, RNA815_8370} |
| 16. | MligTC455_52166 | 296 | 6.16 | Mlig455_029959 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_029959 {REF} {Length: 6259} {RNA1509_35019} {RNA1310_9117, RNA1509_35019} {RNA1509_35019, RNA815_9999} |
Berezikov Lab - 2020-2021 © ERIBA