Data search


search
Exact
Search

Results for MligTC455_13838

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13838 35 0.72 Mlig455_038248

Neo: -

Age: -

Mlig455_038248 {REF} {Length: 613} {NoTransDecoderORF} {RNA1509_54862} {RNA1310_63.1} {RNA815_45422}

Cumulative graph for MligTC455_13838

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.26 0.736 1.00000 1.00000
RegionR2 2.656 0.736 0.99992 1.00000
RegionR3 0.368 0.736 0.99991 1.00000
RegionR4 -2.876 0.736 0.99983 1.00000
RegionR5 -0.899 0.736 0.99991 1.00000
RegionR6 -0.256 0.736 0.99999 1.00000
RegionR7 1.195 0.736 0.99997 1.00000
RegionR8 2.071 0.736 0.99995 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.847 0.736 0.99980 1.00000
RegenerationR2 2.132 0.736 0.99997 1.00000
RegenerationR3 1.794 0.736 1.00000 1.00000
RegenerationR4 1.089 0.736 0.99959 1.00000
RegenerationR5 1.275 0.736 0.99955 1.00000
RegenerationR6 0.419 0.736 0.99982 1.00000
RegenerationBL 2.113 0.736 0.99977 1.00000
RegenerationTP 1.445 0.736 0.99982 1.00000


Genes with expression patterns similar to MligTC455_13838

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13838 35 0.72 Mlig455_038248

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_038248 {REF} {Length: 613} {NoTransDecoderORF} {RNA1509_54862} {RNA1310_63.1} {RNA815_45422}
2. MligTC455_15765 194 4.05 Mlig455_007606

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_007606 {REF} {Length: 1349} {RNA1310_25770.1} {RNA815_11095}
3. MligTC455_13249 72 1.5 Mlig455_028005, Mlig455_028032

Neo: -

Age: Up-Down-Up

IGSF9B 0.958 - - - - 0.958 -

Mlig455_028005 {REF} {Length: 4846} {Pfam: Immunoglobulin domain [PF13927.8, score=163.0]; Immunoglobulin I-set domain [PF07679.18, score=129.4]; Immunoglobulin domain [PF13895.8, score=110.9]; Immunoglobulin domain [PF00047.27, score=102.5]; Immunoglobulin V-set domain [PF07686.19, score=68.9]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=31.1]; Fibronectin type III domain [PF00041.23, score=27.5]; Izumo-like Immunoglobulin domain [PF16706.7, score=22.6]; Immunoglobulin C1-set domain [PF07654.17, score=22.1]; Immunoglobulin domain [PF18452.3, score=20.9]; Tissue factor [PF01108.19, score=19.1]} {Human: ENSG00000080854, IGSF9B, immunoglobulin superfamily member 9B, [RH, Score=232, Expect=2e-62]; ENSG00000085552, IGSF9, immunoglobulin superfamily member 9, [RH, Score=228, Expect=3e-61]} {Mouse: ENSMUSG00000034275, Igsf9b, immunoglobulin superfamily, member 9B, [RH, Score=232, Expect=1e-64]; ENSMUSG00000037995, Igsf9, immunoglobulin superfamily, member 9, [RH, Score=222, Expect=2e-59]} {Dmel: FBgn0010473, tutl, turtle, [RH, Score=250, Expect=5e-70]} {Celegans: WBGene00020130, igcm-2, ImmunoGlobulin-like Cell adhesion Molecule family, [RH, Score=147, Expect=2e-36]} {Smed: dd_Smed_v6_17743_0_1, dd_Smed_v6_17743_0_1, [RH, Score=239, Expect=1e-65]} {RNA1509_10844} {RNA1310_32662} {RNA815_30370}

Mlig455_028032 {REF} {Length: 2715} {Pfam: Immunoglobulin domain [PF13927.8, score=136.6]; Immunoglobulin I-set domain [PF07679.18, score=112.1]; Immunoglobulin domain [PF13895.8, score=96.2]; Immunoglobulin domain [PF00047.27, score=94.6]; Immunoglobulin V-set domain [PF07686.19, score=38.5]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=30.1]; Fibronectin type III domain [PF00041.23, score=28.0]; Tissue factor [PF01108.19, score=23.2]; Immunoglobulin C1-set domain [PF07654.17, score=21.7]} {Human: ENSG00000080854, IGSF9B, immunoglobulin superfamily member 9B, [Score=183, Expect=4e-47]; ENSG00000085552, IGSF9, immunoglobulin superfamily member 9, [Score=181, Expect=3e-46]} {Mouse: ENSMUSG00000034275, Igsf9b, immunoglobulin superfamily, member 9B, [Score=184, Expect=2e-47]; ENSMUSG00000037995, Igsf9, immunoglobulin superfamily, member 9, [Score=175, Expect=8e-45]} {Dmel: FBgn0010473, tutl, turtle, [Score=207, Expect=6e-56]} {Celegans: WBGene00020130, igcm-2, ImmunoGlobulin-like Cell adhesion Molecule family, [RH, Score=145, Expect=5e-36]} {Smed: dd_Smed_v6_17743_0_1, dd_Smed_v6_17743_0_1, [Score=203, Expect=2e-54]} {RNA1509_36563} {RNA1310_113619}
4. MligTC455_39821 45 0.94 Mlig455_020248

Neo: -

Age: -

DRGX 0.957 - - - - 0.957 - Mlig455_020248 {REF} {Length: 1773} {Pfam: Homeodomain [PF00046.31, score=83.1]} {Human: ENSG00000165606, DRGX, dorsal root ganglia homeobox, [RH, Score=132, Expect=4e-35]} {Mouse: ENSMUSG00000041730, Prrxl1, paired related homeobox protein-like 1, [RH, Score=133, Expect=1e-35]} {Dmel: FBgn0085369, Drgx, Dorsal root ganglia homeobox, [RH, Score=152, Expect=3e-40]} {Celegans: WBGene00000440, ceh-17, C. Elegans Homeobox; CEH-17, [Score=112, Expect=3e-28]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [RH, Score=159, Expect=2e-47]} {RNA1310_82891}
5. MligTC455_44072 85 1.77 Mlig455_013727

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_013727 {REF} {Length: 1142} {RNA1509_46059} {RNA1310_23934.1} {RNA815_9260.3}
6. MligTC455_40334 37 0.77 Mlig455_060664

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_060664 {REF} {Length: 529} {RNA1509_15938} {RNA1310_60401} {RNA815_36308}
7. MligTC455_34815 30 0.63 Mlig455_020979

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_020979 {REF} {Length: 1394} {RNA1310_37266}
8. MligTC455_48305 889 18.52 Mlig455_061940

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_061940 {REF} {Length: 764} {NoTransDecoderORF} {RNA1509_29524, RNA1509_47519} {RNA1310_54332, RNA1509_29524, RNA1509_47519} {RNA1509_29524, RNA1509_47519, RNA815_32209}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA