TomoSeq data search

Data search

Results for MligTC455_13898

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13898	16	0.32	Mlig455_002772	Neo: - Age: -		Mlig455_002772 {REF} {Length: 685} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_125978} {RNA815_64986}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_13898

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.416	0.768	0.99960	1.00000
RegionR2	3.316	0.768	0.12694	0.44195
RegionR3	0.904	0.768	0.99976	1.00000
RegionR4	-0.344	0.768	0.71212	0.99708
RegionR5	0.664	0.768	0.99978	1.00000
RegionR6	-0.052	0.768	0.99976	1.00000
RegionR7	-0.508	0.768	0.99979	1.00000
RegionR8	-1.564	0.768	0.99962	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.136	0.768	0.99995	1.00000
RegenerationR2	-0.129	0.768	0.47724	0.86181
RegenerationR3	0.923	0.768	0.27190	0.70591
RegenerationR4	2.155	0.768	0.09585	0.48098
RegenerationR5	0.009	0.768	0.45999	0.83620
RegenerationR6	3.36	0.768	0.05115	0.28335
RegenerationBL	-0.555	0.768	0.99992	1.00000
RegenerationTP	-0.169	0.768	0.99995	1.00000

Genes with expression patterns similar to MligTC455_13898

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13898	16	0.32	Mlig455_002772	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_002772 {REF} {Length: 685} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_125978} {RNA815_64986}
2.	MligTC455_42891	677	14.09	Mlig455_055031, Mlig455_055048	Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.875 Region-enriched R4: 1.977/0.00689	NOTCH1	0.962	-	-	-	-	0.962	-	Mlig455_055031 {REF} {Length: 2484} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.4]; EGF-like domain [PF00008.29, score=68.4]; Human growth factor-like EGF [PF12661.9, score=42.0]; Delta serrate ligand [PF01414.21, score=35.1]; EGF-like domain [PF07974.15, score=21.7]; EGF domain [PF12947.9, score=19.5]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=6e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=133, Expect=2e-31]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=132, Expect=4e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=130, Expect=5e-31]; ENSMUSG00000027878, Notch2, notch 2, [Score=126, Expect=2e-29]} {Dmel: FBgn0004647, N, Notch, [Score=135, Expect=1e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=117, Expect=6e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=1e-27]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1} Mlig455_055048 {REF} {Length: 2388} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.7]; EGF-like domain [PF00008.29, score=72.1]; Human growth factor-like EGF [PF12661.9, score=42.5]; Delta serrate ligand [PF01414.21, score=35.1]; EGF domain [PF12947.9, score=24.5]; EGF-like domain [PF07974.15, score=22.1]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=7e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=133, Expect=1e-31]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=131, Expect=4e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=129, Expect=7e-31]; ENSMUSG00000027878, Notch2, notch 2, [Score=125, Expect=2e-29]} {Dmel: FBgn0004647, N, Notch, [Score=135, Expect=1e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=117, Expect=5e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=9e-28]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_13898

0.32

Mlig455_002772

Neo: -

Age: -

1.000

Mlig455_002772 {REF} {Length: 685} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_125978} {RNA815_64986}

MligTC455_42891

677

14.09

Mlig455_055031, Mlig455_055048

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 2.875

Region-enriched R4: 1.977/0.00689

NOTCH1

0.962

Mlig455_055031 {REF} {Length: 2484} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.4]; EGF-like domain [PF00008.29, score=68.4]; Human growth factor-like EGF [PF12661.9, score=42.0]; Delta serrate ligand [PF01414.21, score=35.1]; EGF-like domain [PF07974.15, score=21.7]; EGF domain [PF12947.9, score=19.5]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=6e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=133, Expect=2e-31]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=132, Expect=4e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=130, Expect=5e-31]; ENSMUSG00000027878, Notch2, notch 2, [Score=126, Expect=2e-29]} {Dmel: FBgn0004647, N, Notch, [Score=135, Expect=1e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=117, Expect=6e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=1e-27]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1}

Mlig455_055048 {REF} {Length: 2388} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.7]; EGF-like domain [PF00008.29, score=72.1]; Human growth factor-like EGF [PF12661.9, score=42.5]; Delta serrate ligand [PF01414.21, score=35.1]; EGF domain [PF12947.9, score=24.5]; EGF-like domain [PF07974.15, score=22.1]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=7e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=133, Expect=1e-31]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=131, Expect=4e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=129, Expect=7e-31]; ENSMUSG00000027878, Notch2, notch 2, [Score=125, Expect=2e-29]} {Dmel: FBgn0004647, N, Notch, [Score=135, Expect=1e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=117, Expect=5e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=9e-28]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1}