TomoSeq data search

Data search

Results for MligTC455_13949

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13949	32	0.66	Mlig455_054004	Neo: - Age: -		Mlig455_054004 {REF} {Length: 1066} {RNA1310_67135} {RNA815_34930}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_13949

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.979	0.944	1.00000	1.00000
RegionR2	1.059	0.944	1.00000	1.00000
RegionR3	0.191	0.944	1.00000	1.00000
RegionR4	-1.019	0.944	0.99986	1.00000
RegionR5	-0.206	0.944	0.99993	1.00000
RegionR6	0.17	0.944	1.00000	1.00000
RegionR7	0.381	0.944	0.99996	1.00000
RegionR8	0.402	0.944	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.995	0.944	1.00000	1.00000
RegenerationR2	2.575	0.944	0.09255	0.48533
RegenerationR3	4.634	0.944	0.02308	0.27387
RegenerationR4	4.228	0.944	0.02521	0.25530
RegenerationR5	3.644	0.944	0.02561	0.27271
RegenerationR6	4.487	0.944	0.03020	0.21697
RegenerationBL	4.361	0.944	0.04228	0.23414
RegenerationTP	4.835	0.944	0.06782	0.41893

Genes with expression patterns similar to MligTC455_13949

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13949	32	0.66	Mlig455_054004	Neo: - Age: -		3	-	-	-	1.000	1.000	1.000	Mlig455_054004 {REF} {Length: 1066} {RNA1310_67135} {RNA815_34930}
2.	MligTC455_49886	37	0.76	Mlig455_063134	Neo: Int S/G2/M Age: -		0.961	-	-	-	0.961	-	-	Mlig455_063134 {REF} {Length: 439} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56631} {RNA1310_23778} {RNA815_50068}
3.	MligTC455_30208	122	2.54	Mlig455_019161	Neo: Germline Age: Up-Down-Up Region-enriched R4: 3.729/0.00000	TRPM2	0.951	-	-	-	0.951	-	-	Mlig455_019161 {REF} {Length: 6277} {Pfam: SLOG in TRPM [PF18139.3, score=88.3]; Ankyrin repeats (many copies) [PF13857.8, score=31.3]; Ankyrin repeats (3 copies) [PF12796.9, score=28.1]; Ion transport protein [PF00520.33, score=25.1]; Polycystin cation channel [PF08016.14, score=23.9]} {Human: ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=275, Expect=5e-75]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=264, Expect=9e-72]} {Mouse: ENSMUSG00000009292, Trpm2, transient receptor potential cation channel, subfamily M, member 2, [Score=291, Expect=2e-80]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=239, Expect=1e-63]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=208, Expect=3e-54]} {Smed: dd_Smed_v6_17857_0_1, dd_Smed_v6_17857_0_1, [Score=422, Expect=5e-128]} {RNA1509_40127} {RNA1310_28449} {RNA815_20675}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_13949

0.66

Mlig455_054004

Neo: -

Age: -

1.000

Mlig455_054004 {REF} {Length: 1066} {RNA1310_67135} {RNA815_34930}

MligTC455_49886

0.76

Mlig455_063134

Neo: Int S/G2/M

Age: -

0.961

Mlig455_063134 {REF} {Length: 439} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56631} {RNA1310_23778} {RNA815_50068}

MligTC455_30208

122

2.54

Mlig455_019161

Neo: Germline

Age: Up-Down-Up

Region-enriched R4: 3.729/0.00000

TRPM2

0.951

Mlig455_019161 {REF} {Length: 6277} {Pfam: SLOG in TRPM [PF18139.3, score=88.3]; Ankyrin repeats (many copies) [PF13857.8, score=31.3]; Ankyrin repeats (3 copies) [PF12796.9, score=28.1]; Ion transport protein [PF00520.33, score=25.1]; Polycystin cation channel [PF08016.14, score=23.9]} {Human: ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=275, Expect=5e-75]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=264, Expect=9e-72]} {Mouse: ENSMUSG00000009292, Trpm2, transient receptor potential cation channel, subfamily M, member 2, [Score=291, Expect=2e-80]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=239, Expect=1e-63]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=208, Expect=3e-54]} {Smed: dd_Smed_v6_17857_0_1, dd_Smed_v6_17857_0_1, [Score=422, Expect=5e-128]} {RNA1509_40127} {RNA1310_28449} {RNA815_20675}