TomoSeq data search

Data search

Results for MligTC455_14106

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14106

356

7.41

Mlig455_037583

Neo: -

Age: logFC(26M/2M)=-0.259

TMBIM4

Mlig455_037583 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: Inhibitor of apoptosis-promoting Bax1 [PF01027.22, score=160.0]} {Human: ENSG00000155957, TMBIM4, transmembrane BAX inhibitor motif containing 4, [RH, Score=179, Expect=1e-55]} {Mouse: ENSMUSG00000020225, Tmbim4, transmembrane BAX inhibitor motif containing 4, [RH, Score=184, Expect=8e-58]} {Dmel: FBgn0013305, Nmda1, N-methyl-D-aspartate receptor-associated protein, [Score=120, Expect=1e-32]} {Celegans: WBGene00006479, tmbi-4, Transmembrane BAX inhibitor motif-containing protein 4, [RH, Score=141, Expect=5e-41]} {Smed: dd_Smed_v6_1521_0_1, dd_Smed_v6_1521_0_1, [RH, Score=214, Expect=5e-70]} {RNA1509_23769, RNA1509_25696, RNA1509_31521, RNA1509_36583, RNA1509_51413} {RNA1310_38587, RNA1509_23769, RNA1509_25696, RNA1509_31521, RNA1509_36583, RNA1509_51413} {RNA1509_23769, RNA1509_25696, RNA1509_31521, RNA1509_36583, RNA1509_51413, RNA815_15216}

Cumulative graph for MligTC455_14106

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.542	3.379	0.73160	1.00000
RegionR2	-0.202	3.379	0.72972	1.00000
RegionR3	0.07	3.379	0.86858	1.00000
RegionR4	0.65	3.379	0.26069	0.56307
RegionR5	-0.574	3.379	0.17951	0.45575
RegionR6	0.078	3.379	0.86378	1.00000
RegionR7	0.467	3.379	0.38855	1.00000
RegionR8	0.053	3.379	0.94719	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.243	3.379	0.47677	1.00000
RegenerationR2	-0.701	3.379	0.18312	0.62577
RegenerationR3	-0.561	3.379	0.29446	0.72643
RegenerationR4	-1.467	3.379	0.01149	0.16351
RegenerationR5	-0.184	3.379	0.70860	0.95496
RegenerationR6	-0.656	3.379	0.26515	0.61505
RegenerationBL	-1.41	3.379	0.14453	0.45324
RegenerationTP	-1.141	3.379	0.12259	0.53155

Genes with expression patterns similar to MligTC455_14106

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14106	356	7.41	Mlig455_037583	Neo: - Age: logFC(26M/2M)=-0.259	TMBIM4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037583 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: Inhibitor of apoptosis-promoting Bax1 [PF01027.22, score=160.0]} {Human: ENSG00000155957, TMBIM4, transmembrane BAX inhibitor motif containing 4, [RH, Score=179, Expect=1e-55]} {Mouse: ENSMUSG00000020225, Tmbim4, transmembrane BAX inhibitor motif containing 4, [RH, Score=184, Expect=8e-58]} {Dmel: FBgn0013305, Nmda1, N-methyl-D-aspartate receptor-associated protein, [Score=120, Expect=1e-32]} {Celegans: WBGene00006479, tmbi-4, Transmembrane BAX inhibitor motif-containing protein 4, [RH, Score=141, Expect=5e-41]} {Smed: dd_Smed_v6_1521_0_1, dd_Smed_v6_1521_0_1, [RH, Score=214, Expect=5e-70]} {RNA1509_23769, RNA1509_25696, RNA1509_31521, RNA1509_36583, RNA1509_51413} {RNA1310_38587, RNA1509_23769, RNA1509_25696, RNA1509_31521, RNA1509_36583, RNA1509_51413} {RNA1509_23769, RNA1509_25696, RNA1509_31521, RNA1509_36583, RNA1509_51413, RNA815_15216}
2.	MligTC455_13332	49	1.01	Mlig455_052737	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_052737 {REF} {Length: 1866} {NoTransDecoderORF} {RNA1509_10728} {RNA1310_11306.1} {RNA815_28207}
3.	MligTC455_32787	379	7.9	Mlig455_043579	Neo: - Age: logFC(26M/2M)=0.262	RCL1	0.953	-	-	-	-	-	0.953	Mlig455_043579 {REF} {Length: 1917} {TRANSSPLICED} {Pfam: RNA 3'-terminal phosphate cyclase [PF01137.23, score=178.0]; RNA 3'-terminal phosphate cyclase (RTC), insert domain [PF05189.15, score=91.2]} {Human: ENSG00000120158, RCL1, RNA terminal phosphate cyclase like 1, [RH, Score=361, Expect=5e-123]} {Mouse: ENSMUSG00000024785, Rcl1, RNA terminal phosphate cyclase-like 1, [RH, Score=360, Expect=9e-123]} {Dmel: FBgn0020909, Rtc1, [RH, Score=310, Expect=3e-103]} {Celegans: WBGene00022852, ZK1127.5, Probable RNA 3'-terminal phosphate cyclase-like protein, [RH, Score=301, Expect=5e-100]} {Smed: dd_Smed_v6_3243_0_1, dd_Smed_v6_3243_0_1, [RH, Score=210, Expect=9e-65]} {RNA1509_29597, RNA1509_31343} {RNA1310_15123.2, RNA1509_29597, RNA1509_31343} {RNA1509_29597, RNA1509_31343, RNA815_10939}
4.	MligTC455_20405	60	1.24	Mlig455_033703	Neo: - Age: Up-Down-Up Region-enriched R5: 2.891/0.02068	BPNT1	0.952	-	-	-	0.952	-	-	Mlig455_033703 {REF} {Length: 2586} {TRANSSPLICED} {Pfam: Inositol monophosphatase family [PF00459.27, score=159.2]} {Human: ENSG00000162813, BPNT1, 3'(2'), 5'-bisphosphate nucleotidase 1, [RH, Score=270, Expect=2e-89]} {Mouse: ENSMUSG00000026617, Bpnt1, bisphosphate 3'-nucleotidase 1, [RH, Score=276, Expect=1e-91]} {Dmel: FBgn0039698, CG7789, [RH, Score=277, Expect=3e-92]} {Celegans: WBGene00044063, bpnt-1, 3'(2'), 5'-BisPhosphate NucleoTidase 1 homolog, [RH, Score=223, Expect=3e-71]} {Smed: dd_Smed_v6_1334_0_1, dd_Smed_v6_1334_0_1, [RH, Score=293, Expect=9e-99]} {RNA1509_24263} {RNA1310_30268.2} {RNA815_24429}
5.	MligTC455_33216	637	13.26	Mlig455_031686	Neo: - Age: -	HGSNAT	0.95	-	-	-	-	-	0.950	Mlig455_031686 {REF} {Length: 2917} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5009) [PF16401.7, score=32.5]; Heparan-alpha-glucosaminide N-acetyltransferase, catalytic [PF07786.14, score=20.2]} {Human: ENSG00000165102, HGSNAT, heparan-alpha-glucosaminide N-acetyltransferase, [Score=172, Expect=2e-47]} {Mouse: ENSMUSG00000037260, Hgsnat, heparan-alpha-glucosaminide N-acetyltransferase, [Score=177, Expect=2e-49]} {Dmel: FBgn0029737, CG6903, [Score=125, Expect=2e-31]} {Smed: dd_Smed_v6_1884_1_3, dd_Smed_v6_1884_1_3, [Score=150, Expect=5e-41]} {RNA1509_13396} {RNA1310_8198.1} {RNA815_2728.1}

Berezikov Lab - 2020-2021 © ERIBA