Data search
Results for MligTC455_14297
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_14297 | 335 | 6.97 | Mlig455_015786 | Neo: - Age: - |
VAV1 | Mlig455_015786 {REF} {Length: 2503} {Pfam: SH2 domain [PF00017.26, score=36.4]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.3]; Calponin homology (CH) domain [PF00307.33, score=32.1]; RhoGEF domain [PF00621.22, score=31.4]} {Human: ENSG00000141968, VAV1, vav guanine nucleotide exchange factor 1, [Score=83.6, Expect=5e-16]} {Mouse: ENSMUSG00000034116, Vav1, vav 1 oncogene, [Score=78.2, Expect=2e-14]} {RNA1509_40876} {RNA1310_7519.2} {RNA815_2645} |
Cumulative graph for MligTC455_14297
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.017 | 3.176 | 0.99140 | 1.00000 | |
| RegionR2 | 0.138 | 3.176 | 0.79602 | 1.00000 | |
| RegionR3 | 0.109 | 3.176 | 0.80447 | 1.00000 | |
| RegionR4 | -0.019 | 3.176 | 0.97571 | 1.00000 | |
| RegionR5 | -0.595 | 3.176 | 0.19466 | 0.48087 | |
| RegionR6 | -0.856 | 3.176 | 0.10969 | 0.60445 | |
| RegionR7 | -0.022 | 3.176 | 0.97460 | 1.00000 | |
| RegionR8 | 1.229 | 3.176 | 0.10112 | 0.59606 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.512 | 3.176 | 0.18419 | 0.92473 | |
| RegenerationR2 | 0.204 | 3.176 | 0.58395 | 0.90846 | |
| RegenerationR3 | -0.129 | 3.176 | 0.77348 | 0.97284 | |
| RegenerationR4 | 0.147 | 3.176 | 0.75600 | 0.97127 | |
| RegenerationR5 | 0.525 | 3.176 | 0.23685 | 0.67083 | |
| RegenerationR6 | 0.867 | 3.176 | 0.09873 | 0.39050 | |
| RegenerationBL | -1.5 | 3.176 | 0.04850 | 0.25276 | |
| RegenerationTP | 0.011 | 3.176 | 0.98800 | 1.00000 |
Genes with expression patterns similar to MligTC455_14297
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_14297 | 335 | 6.97 | Mlig455_015786 | Neo: - Age: - |
VAV1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_015786 {REF} {Length: 2503} {Pfam: SH2 domain [PF00017.26, score=36.4]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.3]; Calponin homology (CH) domain [PF00307.33, score=32.1]; RhoGEF domain [PF00621.22, score=31.4]} {Human: ENSG00000141968, VAV1, vav guanine nucleotide exchange factor 1, [Score=83.6, Expect=5e-16]} {Mouse: ENSMUSG00000034116, Vav1, vav 1 oncogene, [Score=78.2, Expect=2e-14]} {RNA1509_40876} {RNA1310_7519.2} {RNA815_2645} |
| 2. | MligTC455_07848 | 718 | 14.95 | Mlig455_070235 | Neo: - Age: - |
LCK | 2.55 | - | - | - | 0.711 | 0.979 | 0.860 | Mlig455_070235 {REF} {Length: 2482} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=288.1]; Protein kinase domain [PF00069.27, score=161.5]; SH3 domain [PF00018.30, score=50.6]; SH2 domain [PF00017.26, score=46.4]; Variant SH3 domain [PF07653.19, score=34.2]; Variant SH3 domain [PF14604.8, score=29.7]; ABC1 atypical kinase-like domain [PF03109.18, score=25.0]; Haspin like kinase domain [PF12330.10, score=20.3]} {Human: ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=374, Expect=5e-124]; ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=371, Expect=3e-122]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=369, Expect=8e-122]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=365, Expect=6e-120]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=360, Expect=3e-118]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=360, Expect=9e-119]; ENSG00000136573, BLK, BLK proto-oncogene, Src family tyrosine kinase, [Score=357, Expect=2e-117]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=375, Expect=3e-124]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=371, Expect=2e-122]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=365, Expect=5e-120]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=363, Expect=6e-120]; ENSMUSG00000003283, Hck, hemopoietic cell kinase, [Score=362, Expect=2e-119]; ENSMUSG00000027646, Src, Rous sarcoma oncogene, [Score=360, Expect=5e-118]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=389, Expect=8e-130]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=385, Expect=5e-129]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=466, Expect=2e-160]} {RNA1509_21410, RNA1509_27796, RNA1509_54196} {RNA1310_9777, RNA1509_21410, RNA1509_27796, RNA1509_54196} {RNA1509_21410, RNA1509_27796, RNA1509_54196, RNA815_3276.1} |
| 3. | MligTC455_02940 | 663 | 13.8 | Mlig455_062945 | Neo: - Age: - |
1.793 | - | - | 0.950 | - | 0.843 | - | Mlig455_062945 {REF} {Length: 642} {NoTransDecoderORF} {RNA1509_7018} {RNA1310_17786} {RNA815_7590} | |
| 4. | MligTC455_52764 | 458 | 9.53 | Mlig455_007605 | Neo: - Age: logFC(26M/2M)=-0.490 |
1.673 | - | - | - | 0.712 | 0.961 | - | Mlig455_007605 {REF} {Length: 1786} {Pfam: Zinc finger, ZZ type [PF00569.19, score=42.1]; PB1 domain [PF00564.26, score=29.5]} {RNA1509_14616} {RNA1310_27419.1, RNA1509_14616} {RNA1509_14616, RNA815_11811} | |
| 5. | MligTC455_26843 | 1466 | 30.55 | Mlig455_027363, Mlig455_036976 | Neo: - Age: - |
0.966 | 0.966 | - | - | - | - | - | Mlig455_027363 {REF} {Length: 6573} {Celegans: WBGene00021577, Y46B2A.2, [Score=81.6, Expect=4e-17]} {RNA1509_13878} {RNA1310_3364.3} {RNA815_4829.1} Mlig455_036976 {REF} {Length: 5511} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=176.0]} {Celegans: WBGene00022692, ZK250.9, [Score=277, Expect=2e-80]} {RNA1509_18422, RNA1509_59525} {RNA1310_3364.3, RNA1509_59525} {RNA1509_59525, RNA815_4829.1} |
|
| 6. | MligTC455_26842 | 721 | 15.02 | Mlig455_027359 | Neo: - Age: - |
PIF1 | 0.964 | 0.964 | - | - | - | - | - | Mlig455_027359 {REF} {Length: 3657} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=182.4]; PIF1-like helicase [PF05970.16, score=155.8]; AAA domain [PF13604.8, score=47.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=52.4, Expect=4e-06]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=72.4, Expect=1e-12]} {Celegans: WBGene00019136, F59H6.5, [Score=466, Expect=4e-144]} {Smed: dd_Smed_v6_18512_0_3, dd_Smed_v6_18512_0_3, [Score=64.3, Expect=3e-12]} {RNA1509_20735} {RNA1310_3364.2} {RNA815_358.2} |
| 7. | MligTC455_24923 | 784 | 16.33 | Mlig455_046039 | Neo: - Age: - Region-enriched R7: 1.279/0.02111 |
MAN1A2 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_046039 {REF} {Length: 6021} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=495.2]} {Human: ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [RH, Score=590, Expect=0.0]; ENSG00000111885, MAN1A1, mannosidase alpha class 1A member 1, [RH, Score=572, Expect=0.0]} {Mouse: ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [RH, Score=593, Expect=0.0]; ENSMUSG00000003746, Man1a, mannosidase 1, alpha, [RH, Score=578, Expect=0.0]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [RH, Score=572, Expect=0.0]} {Celegans: WBGene00008411, mans-1, alpha-1,2-Mannosidase, [RH, Score=463, Expect=1e-158]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [RH, Score=561, Expect=0.0]} {RNA1509_6506} {RNA1310_8494.1} {RNA815_4281} |
| 8. | MligTC455_27796 | 664 | 13.84 | Mlig455_005664 | Neo: - |
HELZ2 | 0.961 | 0.961 | - | - | - | - | - | Mlig455_005664 {REF} {Length: 8120} {Pfam: RNB domain [PF00773.21, score=158.5]; AAA domain [PF13086.8, score=134.0]; AAA domain [PF13087.8, score=128.8]; AAA domain [PF13604.8, score=26.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.9]; UvrD-like helicase C-terminal domain [PF13361.8, score=19.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=148, Expect=6e-35]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=146, Expect=3e-34]} {Dmel: FBgn0039183, Dis3, [Score=110, Expect=8e-24]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=103, Expect=8e-22]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=326, Expect=7e-90]} {RNA1509_18632} {RNA1310_275} {RNA815_982.1} |
| 9. | MligTC455_24922 | 787 | 16.41 | Mlig455_027482 | Neo: - Age: logFC(26M/2M)=0.337 |
MAN1A2 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_027482 {REF} {Length: 5637} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=495.2]} {Human: ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [RH, Score=600, Expect=0.0]; ENSG00000111885, MAN1A1, mannosidase alpha class 1A member 1, [RH, Score=572, Expect=0.0]} {Mouse: ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [RH, Score=605, Expect=0.0]; ENSMUSG00000003746, Man1a, mannosidase 1, alpha, [RH, Score=577, Expect=0.0]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00008411, mans-1, alpha-1,2-Mannosidase, [RH, Score=464, Expect=1e-157]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [RH, Score=563, Expect=0.0]} {RNA1509_6506} {RNA1310_8494.1, RNA1509_6506} {RNA1509_6506, RNA815_4281} |
| 10. | MligTC455_11717 | 89 | 1.85 | Mlig455_061662, Mlig455_061663 | Neo: - Age: - |
0.956 | 0.956 | - | - | - | - | - | Mlig455_061662 {REF} {Length: 1100} {RNA1509_13494} {RNA1310_72946} {RNA815_44318} Mlig455_061663 {REF} {Length: 1440} {RNA1310_86013} {RNA815_53527} |
Berezikov Lab - 2020-2021 © ERIBA