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Results for MligTC455_14343

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_14343 219 4.56 Mlig455_011338, Mlig455_011344

Neo: -

Age: -

 AL031281.2

Mlig455_011338 {REF} {Length: 1112} {Pfam: Ras family [PF00071.24, score=156.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=65.6]; ADP-ribosylation factor family [PF00025.23, score=26.7]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=208, Expect=1e-68]; ENSG00000070831, CDC42, cell division cycle 42, [Score=208, Expect=1e-68]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=208, Expect=8e-69]} {Dmel: FBgn0010341, Cdc42, [Score=206, Expect=4e-68]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=206, Expect=3e-68]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=203, Expect=3e-67]} {RNA1310_33226.1} {RNA815_29146}

Mlig455_011344 {REF} {Length: 1589} {Pfam: Ras family [PF00071.24, score=94.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.8]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=99.4, Expect=2e-24]; ENSG00000070831, CDC42, cell division cycle 42, [Score=99.4, Expect=2e-24]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=97.1, Expect=2e-23]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=94.7, Expect=7e-23]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=99.4, Expect=1e-24]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=97.1, Expect=9e-24]; ENSMUSG00000039960, Rhou, ras homolog family member U, [Score=97.1, Expect=4e-23]} {Dmel: FBgn0010341, Cdc42, [Score=101, Expect=1e-25]} {Celegans: WBGene00015646, mlt-10, [Score=157, Expect=3e-43]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=103, Expect=2e-26]} {RNA1310_33226.1} {RNA815_29146}

Cumulative graph for MligTC455_14343

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.508 2.737 0.21694 0.85858
RegionR2 2.372 2.737 0.00649 0.07615
RegionR3 1.474 2.737 0.07430 0.48305
RegionR4 -0.012 2.737 0.85914 1.00000
RegionR5 -0.766 2.737 0.97770 1.00000
RegionR6 1.175 2.737 0.20667 0.78180
RegionR7 2.279 2.737 0.01100 0.18246
RegionR8 -1.015 2.737 0.98848 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.486 2.737 0.99996 1.00000
RegenerationR2 0.316 2.737 0.55767 0.89758
RegenerationR3 0.437 2.737 0.49900 0.85710
RegenerationR4 0.718 2.737 0.31215 0.75190
RegenerationR5 2.141 2.737 0.00188 0.07425
RegenerationR6 0.548 2.737 0.42618 0.75547
RegenerationBL -5.12 2.737 0.03215 0.20101
RegenerationTP 2.383 2.737 0.00670 0.13805


Genes with expression patterns similar to MligTC455_14343

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_14343 219 4.56 Mlig455_011338, Mlig455_011344

Neo: -

Age: -

 AL031281.2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_011338 {REF} {Length: 1112} {Pfam: Ras family [PF00071.24, score=156.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=65.6]; ADP-ribosylation factor family [PF00025.23, score=26.7]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=208, Expect=1e-68]; ENSG00000070831, CDC42, cell division cycle 42, [Score=208, Expect=1e-68]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=208, Expect=8e-69]} {Dmel: FBgn0010341, Cdc42, [Score=206, Expect=4e-68]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [Score=206, Expect=3e-68]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=203, Expect=3e-67]} {RNA1310_33226.1} {RNA815_29146}

Mlig455_011344 {REF} {Length: 1589} {Pfam: Ras family [PF00071.24, score=94.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=32.8]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=99.4, Expect=2e-24]; ENSG00000070831, CDC42, cell division cycle 42, [Score=99.4, Expect=2e-24]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=97.1, Expect=2e-23]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=94.7, Expect=7e-23]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=99.4, Expect=1e-24]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=97.1, Expect=9e-24]; ENSMUSG00000039960, Rhou, ras homolog family member U, [Score=97.1, Expect=4e-23]} {Dmel: FBgn0010341, Cdc42, [Score=101, Expect=1e-25]} {Celegans: WBGene00015646, mlt-10, [Score=157, Expect=3e-43]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=103, Expect=2e-26]} {RNA1310_33226.1} {RNA815_29146}
2. MligTC455_51518 162 3.36 Mlig455_037043

Neo: -

Age: -

Region-enriched R7: 3.715/0.00000

 1.679 - - - 0.712 - 0.967 Mlig455_037043 {REF} {Length: 4631} {RNA1509_45796} {RNA1310_11885, RNA1509_45796} {RNA1509_45796, RNA815_30863}
3. MligTC455_12705 288 5.99 Mlig455_012488, Mlig455_012580

Neo: -

Age: -

 0.973 - - 0.973 - - -

Mlig455_012488 {REF} {Length: 1339} {NoTransDecoderORF} {RNA1310_84292}

Mlig455_012580 {REF} {Length: 1946} {NoTransDecoderORF} {RNA1509_17743} {RNA1310_31822} {RNA815_53186}
4. MligTC455_02027 203 4.23 Mlig455_066314

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_066314 {REF} {Length: 3851} {Smed: dd_Smed_v6_18815_0_1, dd_Smed_v6_18815_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1509_42694} {RNA1310_23631} {RNA815_7941.1}
5. MligTC455_13172 117 2.43 Mlig455_047934

Neo: -

Age: -

 0.963 - - - 0.963 - - Mlig455_047934 {REF} {Length: 1321} {NoTransDecoderORF} {RNA1310_145358}
6. MligTC455_27009 8839 184.14 Mlig455_010173, Mlig455_049558, Mlig455_060691

Neo: -

Age: Up-Down-Up

 AC079594.2 0.963 - - - - - 0.963

Mlig455_010173 {REF} {Length: 609} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=36.1]; RING-type zinc-finger [PF13445.8, score=35.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=29.9]; Ring finger domain [PF13639.8, score=29.6]; zinc-RING finger domain [PF14634.8, score=27.9]; Prokaryotic RING finger family 4 [PF14447.8, score=22.9]; Zinc finger-containing protein [PF10146.11, score=20.0]; RING/Ubox like zinc-binding domain [PF14570.8, score=19.9]} {Human: ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=60.5, Expect=1e-10]; ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=60.5, Expect=1e-10]} {Mouse: ENSMUSG00000034317, Trim59, tripartite motif-containing 59, [Score=54.3, Expect=9e-09]; ENSMUSG00000020707, Rnf135, ring finger protein 135, [Score=53.1, Expect=2e-08]} {Dmel: FBgn0040294, POSH, Plenty of SH3s, [Score=55.1, Expect=5e-09]} {Celegans: WBGene00010000, F53F8.3, [RH, Score=50.8, Expect=5e-08]} {Smed: dd_Smed_v6_14782_0_2, dd_Smed_v6_14782_0_2, [Score=55.8, Expect=9e-10]} {RNA1509_16497} {RNA1310_64493.2} {RNA815_32985}

Mlig455_049558 {REF} {Length: 3804} {Pfam: Replication protein A OB domain [PF16900.7, score=47.7]; RING-type zinc-finger [PF13445.8, score=34.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=33.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=29.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.7]; zinc-RING finger domain [PF14634.8, score=28.4]; Ring finger domain [PF13639.8, score=28.2]; Prokaryotic RING finger family 4 [PF14447.8, score=22.7]; Zinc finger-containing protein [PF10146.11, score=19.4]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.9]} {Human: ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=61.2, Expect=1e-09]; ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=60.8, Expect=7e-10]} {Mouse: ENSMUSG00000020707, Rnf135, ring finger protein 135, [Score=55.5, Expect=3e-08]; ENSMUSG00000034317, Trim59, tripartite motif-containing 59, [Score=54.7, Expect=6e-08]} {Dmel: FBgn0040294, POSH, Plenty of SH3s, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_14782_0_1, dd_Smed_v6_14782_0_1, [Score=58.2, Expect=1e-09]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1}

Mlig455_060691 {REF} {Length: 990} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.7]; RING-type zinc-finger [PF13445.8, score=35.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.7]; zinc-RING finger domain [PF14634.8, score=29.6]; Ring finger domain [PF13639.8, score=29.5]; Prokaryotic RING finger family 4 [PF14447.8, score=25.1]; RING/Ubox like zinc-binding domain [PF14570.8, score=20.9]; Zinc finger-containing protein [PF10146.11, score=20.3]} {Human: ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=60.1, Expect=1e-10]; ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=60.1, Expect=1e-10]} {Mouse: ENSMUSG00000020707, Rnf135, ring finger protein 135, [Score=55.1, Expect=5e-09]; ENSMUSG00000034317, Trim59, tripartite motif-containing 59, [Score=53.9, Expect=1e-08]} {Dmel: FBgn0040294, POSH, Plenty of SH3s, [Score=51.6, Expect=6e-08]} {Celegans: WBGene00004380, rnf-1, RiNg Finger protein, [Score=44.7, Expect=1e-05]} {Smed: dd_Smed_v6_14782_0_2, dd_Smed_v6_14782_0_2, [Score=57.0, Expect=3e-10]} {RNA1509_16497} {RNA1310_64493.2} {RNA815_32985}
7. MligTC455_17365 70 1.45 Mlig455_036665, Mlig455_036678

Neo: -

Age: -

Region-enriched R4: 4.188/0.02374
Region-enriched R5: 3.646/0.03336

 0.959 - - - - 0.959 -

Mlig455_036665 {REF} {Length: 857} {RNA1310_56540}

Mlig455_036678 {REF} {Length: 857} {Pfam: Protein of unknown function (DUF615) [PF04751.16, score=18.8]} {RNA1310_56540}
8. MligTC455_29103 3633 75.68 Mlig455_040744

Neo: -

Age: -

Regeneration-downregulated BL: -1.290

Regeneration-depleted BL: -1.290

 0.955 - - - - - 0.955 Mlig455_040744 {REF} {Length: 2153} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.1]; Ankyrin repeats (many copies) [PF13637.8, score=32.3]; Ankyrin repeats (many copies) [PF13857.8, score=30.8]; Ankyrin repeat [PF00023.32, score=27.5]; Ankyrin repeat [PF13606.8, score=26.5]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=55.1, Expect=6e-08]} {RNA1509_1419, RNA1509_44630} {RNA1310_18767.1, RNA1509_44630} {RNA1509_44630, RNA815_4150}
9. MligTC455_17603 88 1.83 Mlig455_051492, Mlig455_051530

Neo: -

Age: -

Region-enriched R5: 3.673/0.00764

 0.954 - - - - 0.954 -

Mlig455_051492 {REF} {Length: 584} {NoTransDecoderORF} {RNA1310_18616}

Mlig455_051530 {REF} {Length: 990} {NoTransDecoderORF} {RNA1310_18616}

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