TomoSeq data search

Data search

Results for MligTC455_14354

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_14354	35	0.73	Mlig455_001526	Neo: - Age: -	ADRA1B	Mlig455_001526 {REF} {Length: 1977} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=93.0]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=37.1]} {Human: ENSG00000170214, ADRA1B, adrenoceptor alpha 1B, [Score=70.9, Expect=1e-12]} {Mouse: ENSMUSG00000050541, Adra1b, adrenergic receptor, alpha 1b, [Score=72.8, Expect=1e-13]; ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=69.7, Expect=1e-12]} {Dmel: FBgn0011582, Dop1R1, Dopamine 1-like receptor 1, [Score=72.4, Expect=1e-13]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=65.1, Expect=2e-11]} {Smed: dd_Smed_v6_13756_0_1, dd_Smed_v6_13756_0_1, [Score=53.9, Expect=6e-08]} {RNA1310_17159} {RNA815_22522}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14354

0.73

Mlig455_001526

Neo: -

Age: -

ADRA1B

Mlig455_001526 {REF} {Length: 1977} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=93.0]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=37.1]} {Human: ENSG00000170214, ADRA1B, adrenoceptor alpha 1B, [Score=70.9, Expect=1e-12]} {Mouse: ENSMUSG00000050541, Adra1b, adrenergic receptor, alpha 1b, [Score=72.8, Expect=1e-13]; ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=69.7, Expect=1e-12]} {Dmel: FBgn0011582, Dop1R1, Dopamine 1-like receptor 1, [Score=72.4, Expect=1e-13]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=65.1, Expect=2e-11]} {Smed: dd_Smed_v6_13756_0_1, dd_Smed_v6_13756_0_1, [Score=53.9, Expect=6e-08]} {RNA1310_17159} {RNA815_22522}

Cumulative graph for MligTC455_14354

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.078	1.031	0.99975	1.00000
RegionR2	-0.339	1.031	0.87778	1.00000
RegionR3	1.128	1.031	0.25155	0.79594
RegionR4	2.391	1.031	0.09244	0.29164
RegionR5	0.517	1.031	0.38033	0.73446
RegionR6	1.999	1.031	0.08313	0.53223
RegionR7	0.962	1.031	0.58830	1.00000
RegionR8	-4.582	1.031	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.037	1.031	1.00000	1.00000
RegenerationR2	-3.633	1.031	0.00762	0.13887
RegenerationR3	-4.633	1.031	0.00047	0.03175
RegenerationR4	-4.546	1.031	0.00120	0.04002
RegenerationR5	-3.73	1.031	0.00256	0.08853
RegenerationR6	-5.156	1.031	0.00076	0.02976
RegenerationBL	-2.709	1.031	0.99987	1.00000
RegenerationTP	-2.531	1.031	0.99993	1.00000

Genes with expression patterns similar to MligTC455_14354

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14354	35	0.73	Mlig455_001526	Neo: - Age: -	ADRA1B	2	1.000	1.000	-	-	-	-	Mlig455_001526 {REF} {Length: 1977} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=93.0]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=37.1]} {Human: ENSG00000170214, ADRA1B, adrenoceptor alpha 1B, [Score=70.9, Expect=1e-12]} {Mouse: ENSMUSG00000050541, Adra1b, adrenergic receptor, alpha 1b, [Score=72.8, Expect=1e-13]; ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=69.7, Expect=1e-12]} {Dmel: FBgn0011582, Dop1R1, Dopamine 1-like receptor 1, [Score=72.4, Expect=1e-13]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=65.1, Expect=2e-11]} {Smed: dd_Smed_v6_13756_0_1, dd_Smed_v6_13756_0_1, [Score=53.9, Expect=6e-08]} {RNA1310_17159} {RNA815_22522}
2.	MligTC455_21718	40	0.83	Mlig455_058799, Mlig455_058852	Neo: - Age: -	KCNC1	0.976	0.976	-	-	-	-	-	Mlig455_058799 {REF} {Length: 2779} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=123.9]; BTB/POZ domain [PF02214.24, score=105.2]; Ion channel [PF07885.18, score=36.9]; BTB/POZ domain [PF16017.7, score=23.9]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=358, Expect=8e-115]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=347, Expect=5e-110]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=358, Expect=5e-115]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=399, Expect=6e-132]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=382, Expect=9e-125]} {Smed: dd_Smed_v6_26861_0_1, dd_Smed_v6_26861_0_1, [RH, Score=444, Expect=2e-148]} {RNA1509_17350} {RNA1310_54118} {RNA815_33188} Mlig455_058852 {REF} {Length: 2213} {Pfam: Ion transport protein [PF00520.33, score=124.3]; BTB/POZ domain [PF02214.24, score=105.1]; Ion channel [PF07885.18, score=36.8]; BTB/POZ domain [PF16017.7, score=23.9]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=356, Expect=2e-114]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=345, Expect=5e-109]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=357, Expect=7e-115]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=399, Expect=2e-131]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=381, Expect=8e-124]} {Smed: dd_Smed_v6_26861_0_1, dd_Smed_v6_26861_0_1, [RH, Score=445, Expect=3e-148]} {RNA1509_17350} {RNA1310_54118} {RNA815_12102}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_14354

0.73

Mlig455_001526

Neo: -

Age: -

ADRA1B

1.000

MligTC455_21718

0.83

Mlig455_058799, Mlig455_058852

Neo: -

Age: -

KCNC1

0.976

Mlig455_058799 {REF} {Length: 2779} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=123.9]; BTB/POZ domain [PF02214.24, score=105.2]; Ion channel [PF07885.18, score=36.9]; BTB/POZ domain [PF16017.7, score=23.9]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=358, Expect=8e-115]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=347, Expect=5e-110]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=358, Expect=5e-115]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=399, Expect=6e-132]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=382, Expect=9e-125]} {Smed: dd_Smed_v6_26861_0_1, dd_Smed_v6_26861_0_1, [RH, Score=444, Expect=2e-148]} {RNA1509_17350} {RNA1310_54118} {RNA815_33188}

Mlig455_058852 {REF} {Length: 2213} {Pfam: Ion transport protein [PF00520.33, score=124.3]; BTB/POZ domain [PF02214.24, score=105.1]; Ion channel [PF07885.18, score=36.8]; BTB/POZ domain [PF16017.7, score=23.9]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=356, Expect=2e-114]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=345, Expect=5e-109]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=357, Expect=7e-115]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=399, Expect=2e-131]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=381, Expect=8e-124]} {Smed: dd_Smed_v6_26861_0_1, dd_Smed_v6_26861_0_1, [RH, Score=445, Expect=3e-148]} {RNA1509_17350} {RNA1310_54118} {RNA815_12102}