Data search
Results for MligTC455_14488
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_14488 | 24 | 0.49 | Mlig455_012581 | Neo: - Age: - |
Mlig455_012581 {REF} {Length: 2508} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=47.6]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.0]} {Dmel: FBgn0038874, ETHR, [Score=58.2, Expect=8e-09]} {Smed: dd_Smed_v6_15884_0_1, dd_Smed_v6_15884_0_1, [Score=85.9, Expect=3e-18]} {RNA1509_15945} {RNA1310_109944, RNA1509_15945} {RNA1509_15945, RNA815_3780.1} |
Cumulative graph for MligTC455_14488
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.9 | 0.978 | 0.29756 | 0.94763 | |
| RegionR2 | 1.073 | 0.978 | 0.60342 | 0.95335 | |
| RegionR3 | -1.585 | 0.978 | 0.98119 | 1.00000 | |
| RegionR4 | 0.228 | 0.978 | 0.74936 | 1.00000 | |
| RegionR5 | -0.646 | 0.978 | 0.96623 | 1.00000 | |
| RegionR6 | -0.333 | 0.978 | 0.88549 | 1.00000 | |
| RegionR7 | -0.723 | 0.978 | 0.99964 | 1.00000 | |
| RegionR8 | -0.914 | 0.978 | 0.99981 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.417 | 0.978 | 0.84690 | 1.00000 | |
| RegenerationR2 | 2.641 | 0.978 | 0.05496 | 0.38644 | |
| RegenerationR3 | 3.311 | 0.978 | 0.03920 | 0.34864 | |
| RegenerationR4 | 1.447 | 0.978 | 0.29323 | 0.73649 | |
| RegenerationR5 | -2.226 | 0.978 | 0.30687 | 0.73393 | |
| RegenerationR6 | 0.48 | 0.978 | 0.61485 | 0.87720 | |
| RegenerationBL | -0.856 | 0.978 | 0.99987 | 1.00000 | |
| RegenerationTP | 2.683 | 0.978 | 0.31991 | 0.76487 |
Genes with expression patterns similar to MligTC455_14488
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_14488 | 24 | 0.49 | Mlig455_012581 | Neo: - Age: - |
2 | 1.000 | - | - | - | 1.000 | - | Mlig455_012581 {REF} {Length: 2508} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=47.6]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.0]} {Dmel: FBgn0038874, ETHR, [Score=58.2, Expect=8e-09]} {Smed: dd_Smed_v6_15884_0_1, dd_Smed_v6_15884_0_1, [Score=85.9, Expect=3e-18]} {RNA1509_15945} {RNA1310_109944, RNA1509_15945} {RNA1509_15945, RNA815_3780.1} | |
| 2. | MligTC455_31910 | 421 | 8.78 | Mlig455_062953 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 4.511 Region-enriched R4: 3.551/0.00000 |
FAM78B | 0.985 | - | - | - | - | 0.985 | - | Mlig455_062953 {REF} {Length: 3284} {Human: ENSG00000188859, FAM78B, family with sequence similarity 78 member B, [Score=118, Expect=6e-30]} {Mouse: ENSMUSG00000060568, Fam78b, family with sequence similarity 78, member B, [Score=118, Expect=4e-30]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=79.7, Expect=6e-18]} {RNA1509_21467, RNA1509_24650, RNA1509_34096} {RNA1310_23443, RNA1509_21467, RNA1509_24650, RNA1509_34096} {RNA1509_21467, RNA1509_24650, RNA1509_34096, RNA815_9695.1} |
| 3. | MligTC455_15228 | 38 | 0.8 | Mlig455_023876 | Neo: - Age: - |
0.984 | - | - | - | - | 0.984 | - | Mlig455_023876 {REF} {Length: 827} {RNA1509_31914} {RNA1310_102040} {RNA815_22831} | |
| 4. | MligTC455_31927 | 52 | 1.09 | Mlig455_068193 | Neo: - Age: - Region-enriched R4: 3.790/0.04231 |
0.982 | - | - | - | - | 0.982 | - | Mlig455_068193 {REF} {Length: 2308} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=121.9]} {Celegans: WBGene00019136, F59H6.5, [Score=147, Expect=3e-38]} {RNA1509_52720} {RNA1310_63836, RNA1509_52720} {RNA1509_52720, RNA815_1650.1} | |
| 5. | MligTC455_09502 | 502 | 10.47 | Mlig455_037434 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.335 Region-enriched R4: 3.426/0.00000 Regeneration-downregulated R4: -2.750 Regeneration-depleted R4: -2.750 |
AK1 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_037434 {REF} {Length: 1987} {Pfam: Adenylate kinase [PF00406.24, score=150.1]; AAA domain [PF13207.8, score=97.4]; AAA domain [PF13671.8, score=19.7]} {Human: ENSG00000106992, AK1, adenylate kinase 1, [Score=210, Expect=5e-69]} {Mouse: ENSMUSG00000026817, Ak1, adenylate kinase 1, [Score=214, Expect=5e-71]} {Dmel: FBgn0022709, Adk1, Adenylate kinase 1, [Score=150, Expect=6e-46]} {Celegans: WBGene00009531, F38B2.4, Adenylate kinase isoenzyme 1, [Score=206, Expect=7e-68]} {Smed: dd_Smed_v6_1229_0_2, dd_Smed_v6_1229_0_2, [Score=242, Expect=4e-82]} {RNA1509_12982, RNA1509_32125} {RNA1310_39625, RNA1509_12982} {RNA1509_12982, RNA815_25788} |
| 6. | MligTC455_05585 | 3 | 0.06 | Mlig455_020266 | Neo: - |
PRR9 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_020266 {REF} {Length: 550} {Pfam: Cysteine rich repeat [PF02363.21, score=25.4]} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=3e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=47.0, Expect=8e-07]} {RNA1509_49770} {RNA1310_59616.2} {RNA815_12664} |
| 7. | MligTC455_13339 | 162 | 3.37 | Mlig455_003532, Mlig455_015531 | Neo: Germline Age: Up-Down-Down Region-specific R4: 4.975 Region-enriched R4: 3.220/0.00015 |
0.971 | - | - | - | - | 0.971 | - | Mlig455_003532 {REF} {Length: 2211} {Pfam: F-box domain [PF00646.35, score=21.1]} {RNA1509_26531} {RNA1310_20185.1, RNA1509_26531} {RNA1509_26531, RNA815_20275} Mlig455_015531 {REF} {Length: 1892} {Pfam: F-box domain [PF00646.35, score=21.1]} {RNA1509_26531} {RNA1310_20185.1} {RNA815_20275} |
|
| 8. | MligTC455_45022 | 194 | 4.05 | Mlig455_024605 | Neo: Germline Age: Up-Down-Down Region-specific R4: 4.229 Region-enriched R4: 3.297/0.00005 |
0.964 | - | - | - | - | 0.964 | - | Mlig455_024605 {REF} {Length: 3347} {RNA1509_15667} {RNA1310_7650} {RNA815_39665} | |
| 9. | MligTC455_31911 | 171 | 3.55 | Mlig455_067081 | Neo: Int S/G2/M Age: Up-Down-Down Region-specific R4: 5.198 Region-enriched R4: 4.113/0.00000 |
FAM78B | 0.959 | - | - | - | - | 0.959 | - | Mlig455_067081 {REF} {Length: 2631} {Human: ENSG00000188859, FAM78B, family with sequence similarity 78 member B, [Score=118, Expect=6e-30]} {Mouse: ENSMUSG00000060568, Fam78b, family with sequence similarity 78, member B, [Score=118, Expect=4e-30]} {Smed: dd_Smed_v6_50260_0_1, dd_Smed_v6_50260_0_1, [Score=79.7, Expect=6e-18]} {RNA1509_5570} {RNA1310_23443} {RNA815_9695.1} |
| 10. | MligTC455_25337 | 279 | 5.82 | Mlig455_021734 | Neo: Germline Age: - Region-enriched R4: 3.623/0.00937 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_021734 {REF} {Length: 2197} {Pfam: Rdx family [PF10262.11, score=25.9]} {RNA1509_33328, RNA1509_34368} {RNA1310_45699.1, RNA1509_33328, RNA1509_34368} {RNA1509_33328, RNA1509_34368, RNA815_26659} |
Berezikov Lab - 2020-2021 © ERIBA