Data search


search
Exact
Search

Results for MligTC455_14551

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_14551 23 0.48 Mlig455_017016

Neo: -

Age: -

Region-enriched R4: 5.776/0.00972
Region-enriched R5: 3.271/0.03494

GRASP Mlig455_017016 {REF} {Length: 2590} {Pfam: PDZ domain [PF17820.3, score=32.4]; PDZ domain [PF00595.26, score=24.1]} {Human: ENSG00000161835, GRASP, general receptor for phosphoinositides 1 associated scaffold protein, [Score=53.1, Expect=5e-08]; ENSG00000162105, SHANK2, SH3 and multiple ankyrin repeat domains 2, [Score=52.0, Expect=4e-08]} {Mouse: ENSMUSG00000000531, Grasp, GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein, [Score=53.5, Expect=2e-08]} {Dmel: FBgn0035676, ssp6, short spindle 6, [Score=78.6, Expect=6e-17]} {Celegans: WBGene00009272, gras-1, GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog, [Score=58.2, Expect=2e-10]} {RNA1509_57284} {RNA1310_36717} {RNA815_20577}

Cumulative graph for MligTC455_14551

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.304 0.965 0.99963 1.00000
RegionR2 -4.506 0.965 1.00000 1.00000
RegionR3 2.701 0.965 0.01901 0.22974
RegionR4 5.776 0.965 0.00091 0.00972
RegionR5 3.271 0.965 0.00506 0.03494
RegionR6 1.308 0.965 0.27935 0.86926
RegionR7 -3.032 0.965 1.00000 1.00000
RegionR8 -3.213 0.965 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.363 0.965 1.00000 1.00000
RegenerationR2 1.393 0.965 0.29090 0.73376
RegenerationR3 -1.987 0.965 0.04951 0.38628
RegenerationR4 -2.495 0.965 0.05507 0.37686
RegenerationR5 -2.007 0.965 0.04474 0.34613
RegenerationR6 -0.699 0.965 0.58301 0.85935
RegenerationBL -1.576 0.965 0.99979 1.00000
RegenerationTP 1.298 0.965 0.57096 0.94496


Genes with expression patterns similar to MligTC455_14551

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_14551 23 0.48 Mlig455_017016

Neo: -

Age: -

Region-enriched R4: 5.776/0.00972
Region-enriched R5: 3.271/0.03494

GRASP 3 - - 1.000 1.000 - 1.000 Mlig455_017016 {REF} {Length: 2590} {Pfam: PDZ domain [PF17820.3, score=32.4]; PDZ domain [PF00595.26, score=24.1]} {Human: ENSG00000161835, GRASP, general receptor for phosphoinositides 1 associated scaffold protein, [Score=53.1, Expect=5e-08]; ENSG00000162105, SHANK2, SH3 and multiple ankyrin repeat domains 2, [Score=52.0, Expect=4e-08]} {Mouse: ENSMUSG00000000531, Grasp, GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein, [Score=53.5, Expect=2e-08]} {Dmel: FBgn0035676, ssp6, short spindle 6, [Score=78.6, Expect=6e-17]} {Celegans: WBGene00009272, gras-1, GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog, [Score=58.2, Expect=2e-10]} {RNA1509_57284} {RNA1310_36717} {RNA815_20577}
2. MligTC455_13993 60 1.24 Mlig455_041619

Neo: -

Age: -

GIMAP1-GIMAP5 0.992 - - 0.992 - - - Mlig455_041619 {REF} {Length: 1795} {Pfam: AIG1 family [PF04548.18, score=85.6]; 50S ribosome-binding GTPase [PF01926.25, score=27.4]; RsgA GTPase [PF03193.18, score=22.3]; AAA domain [PF13401.8, score=20.3]} {Human: ENSG00000281887, GIMAP1-GIMAP5, GIMAP1-GIMAP5 readthrough, [Score=66.2, Expect=1e-11]; ENSG00000196329, GIMAP5, GTPase, IMAP family member 5, [Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000064262, Gimap8, GTPase, IMAP family member 8, [Score=62.0, Expect=3e-10]} {RNA1509_2706} {RNA1310_95752} {RNA815_12983}
3. MligTC455_33579 338 7.03 Mlig455_040258

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.940

Region-enriched R4: 2.544/0.00122

0.983 - - 0.983 - - - Mlig455_040258 {REF} {Length: 1449} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=104, Expect=7e-27]} {RNA1509_4846} {RNA1310_30668} {RNA815_15892.1}
4. MligTC455_29207 22 0.45 Mlig455_052019

Neo: -

Age: logFC(26M/2M)=-0.642

0.977 - - 0.977 - - - Mlig455_052019 {REF} {Length: 1394} {RNA1310_31570} {RNA815_32340}
5. MligTC455_10293 24 0.5 Mlig455_034227

Neo: Germline

Age: -

Region-enriched R4: 3.468/0.02745

0.971 - - 0.971 - - - Mlig455_034227 {REF} {Length: 1019} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=47.4]} {RNA1509_57780} {RNA1310_66882} {RNA815_29775}
6. MligTC455_10292 65 1.36 Mlig455_000792

Neo: Germline

Age: Up-Down-Down

0.966 - - 0.966 - - - Mlig455_000792 {REF} {Length: 1361} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=47.4]} {RNA1509_57780} {RNA1310_66882, RNA1509_57780} {RNA1509_57780, RNA815_29775}
7. MligTC455_37118 445 9.28 Mlig455_060813

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 1.884/0.04311

PYGL 0.96 - - 0.960 - - - Mlig455_060813 {REF} {Length: 2589} {TRANSSPLICED} {Pfam: Carbohydrate phosphorylase [PF00343.22, score=1127.7]} {Human: ENSG00000100504, PYGL, glycogen phosphorylase L, [Score=1041, Expect=0.0]; ENSG00000068976, PYGM, glycogen phosphorylase, muscle associated, [Score=1038, Expect=0.0]; ENSG00000100994, PYGB, glycogen phosphorylase B, [Score=1033, Expect=0.0]} {Mouse: ENSMUSG00000021069, Pygl, liver glycogen phosphorylase, [RH, Score=1051, Expect=0.0]} {Dmel: FBgn0004507, GlyP, Glycogen phosphorylase, [Score=1035, Expect=0.0]} {Celegans: WBGene00020696, T22F3.3, Alpha-1,4 glucan phosphorylase, [Score=1020, Expect=0.0]} {Smed: dd_Smed_v6_1532_0_1, dd_Smed_v6_1532_0_1, [Score=1045, Expect=0.0]} {RNA1509_16249, RNA1509_2694} {RNA1310_5867, RNA1509_16249} {RNA1509_16249, RNA815_1744}
8. MligTC455_01227 13 0.27 Mlig455_009929

Neo: -

Age: -

0.958 - - 0.958 - - - Mlig455_009929 {REF} {Length: 963} {RNA1509_43445} {RNA1310_26074.1} {RNA815_12069.1}
9. MligTC455_18296 68 1.41 Mlig455_058144

Neo: -

Age: -

FITM2 0.958 - - - 0.958 - - Mlig455_058144 {REF} {Length: 2857} {TRANSSPLICED} {Pfam: Inositol phospholipid synthesis and fat-storage-inducing TM [PF10261.11, score=73.1]} {Human: ENSG00000197296, FITM2, fat storage inducing transmembrane protein 2, [RH, Score=131, Expect=1e-35]} {Mouse: ENSMUSG00000048486, Fitm2, fat storage-inducing transmembrane protein 2, [RH, Score=130, Expect=2e-35]} {Dmel: FBgn0035586, Fitm, Fat storage inducing transmembrane protein, [RH, Score=155, Expect=4e-43]} {Smed: dd_Smed_v6_10388_0_1, dd_Smed_v6_10388_0_1, [RH, Score=224, Expect=2e-71]} {RNA1509_30611} {RNA1310_26356} {RNA815_17176}
10. MligTC455_25090 63 1.31 Mlig455_006470

Neo: -

Age: -

Region-enriched R4: 3.529/0.04817

ANK1 0.955 - - - - - 0.955 Mlig455_006470 {REF} {Length: 3983} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=186.9]; Ankyrin repeats (many copies) [PF13637.8, score=124.7]; Ankyrin repeat [PF00023.32, score=97.6]; Ankyrin repeat [PF13606.8, score=92.0]; Ankyrin repeats (many copies) [PF13857.8, score=91.4]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=141, Expect=2e-34]; ENSG00000151150, ANK3, ankyrin 3, [Score=136, Expect=9e-33]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=135, Expect=7e-33]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=131, Expect=2e-31]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=130, Expect=3e-32]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=133, Expect=3e-32]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=118, Expect=2e-27]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=127, Expect=2e-30]} {RNA1509_38691} {RNA1310_3760} {RNA815_2084.1}
11. MligTC455_51737 49 1.01 Mlig455_060275

Neo: Germline

Age: logFC(26M/2M)=-0.968

Region-enriched R4: 3.321/0.01433

HFM1 0.954 - - 0.954 - - - Mlig455_060275 {REF} {Length: 5261} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=79.5]; Sec63 Brl domain [PF02889.18, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=34.2]; Type III restriction enzyme, res subunit [PF04851.17, score=33.2]; Helix-hairpin-helix domain [PF14520.8, score=22.6]} {Human: ENSG00000162669, HFM1, HFM1, ATP dependent DNA helicase homolog, [RH, Score=571, Expect=3e-177]} {Mouse: ENSMUSG00000043410, Hfm1, HFM1, ATP-dependent DNA helicase homolog, [RH, Score=568, Expect=1e-176]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [Score=280, Expect=5e-76]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [Score=265, Expect=2e-71]} {Smed: dd_Smed_v6_24408_0_1, dd_Smed_v6_24408_0_1, [RH, Score=448, Expect=5e-135]} {RNA1509_54934} {RNA1310_43917, RNA1509_54934} {RNA1509_54934, RNA815_48120}
12. MligTC455_00659 58 1.2 Mlig455_012348

Neo: -

Age: -

0.953 - - 0.953 - - - Mlig455_012348 {REF} {Length: 585} {NoTransDecoderORF} {RNA1310_63014} {RNA815_26011}
13. MligTC455_05550 64 1.34 Mlig455_002463

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.253/0.01412

0.953 - - 0.953 - - - Mlig455_002463 {REF} {Length: 1403} {Pfam: DDE superfamily endonuclease [PF13358.8, score=44.5]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=53.9, Expect=3e-09]} {RNA1310_30707.1} {RNA815_14917.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA