Data search


search
Exact
Search

Results for MligTC455_14591

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_14591 14 0.29 Mlig455_040349

Neo: -

Age: -

Mlig455_040349 {REF} {Length: 1744} {RNA1509_22932} {RNA1310_19377.1} {RNA815_224.1}

Cumulative graph for MligTC455_14591

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.15 0.703 0.99993 1.00000
RegionR2 -0.654 0.703 0.99983 1.00000
RegionR3 -0.355 0.703 0.99993 1.00000
RegionR4 0.39 0.703 0.99994 1.00000
RegionR5 -0.264 0.703 0.99991 1.00000
RegionR6 -0.456 0.703 0.99995 1.00000
RegionR7 -0.042 0.703 0.99997 1.00000
RegionR8 0.231 0.703 0.99996 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.002 0.703 0.99996 1.00000
RegenerationR2 1.932 0.703 0.18888 0.63283
RegenerationR3 2.614 0.703 0.25812 0.69243
RegenerationR4 2.512 0.703 0.19768 0.64292
RegenerationR5 2.341 0.703 0.18042 0.61022
RegenerationR6 3.269 0.703 0.16025 0.48874
RegenerationBL -0.4 0.703 0.99997 1.00000
RegenerationTP 1.171 0.703 0.66007 0.99368


Genes with expression patterns similar to MligTC455_14591

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_14591 14 0.29 Mlig455_040349

Neo: -

Age: -

1 - - - 1.000 - - Mlig455_040349 {REF} {Length: 1744} {RNA1509_22932} {RNA1310_19377.1} {RNA815_224.1}
2. MligTC455_34497 50 1.03 Mlig455_057540, Mlig455_058243, Mlig455_068776, Mlig455_069555

Neo: -

Age: -

0.962 - - - 0.962 - -

Mlig455_057540 {REF} {Length: 1160} {NoTransDecoderORF} {RNA1509_52345} {RNA1310_90874} {RNA815_25651.2}

Mlig455_058243 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_33089.1} {RNA815_25651.2}

Mlig455_068776 {REF} {Length: 1284} {NoTransDecoderORF} {RNA1310_33089.1} {RNA815_25651.2}

Mlig455_069555 {REF} {Length: 973} {NoTransDecoderORF} {RNA1509_10641} {RNA1310_33089.1} {RNA815_25651.2}
3. MligTC455_39786 16 0.33 Mlig455_049551

Neo: -

Age: -

0.959 - - - 0.959 - - Mlig455_049551 {REF} {Length: 2496} {RNA1509_18723} {RNA1310_95138} {RNA815_42097}
4. MligTC455_41207 52 1.08 Mlig455_011309, Mlig455_060938

Neo: -

Age: -

0.959 - - - 0.959 - -

Mlig455_011309 {REF} {Length: 76} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22660} {RNA1310_12928.1} {RNA815_18634}

Mlig455_060938 {REF} {Length: 68} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22660} {RNA1310_12928.1} {RNA815_18634}
5. MligTC455_09938 37 0.78 Mlig455_063017

Neo: -

Age: -

0.956 - - - 0.956 - - Mlig455_063017 {REF} {Length: 881} {NoTransDecoderORF}
6. MligTC455_05958 6 0.12 Mlig455_045904

Neo: -

Age: -

0.954 - - - 0.954 - - Mlig455_045904 {REF} {Length: 260} {NoTransDecoderORF}
7. MligTC455_28502 303 6.32 Mlig455_038823, Mlig455_038908

Neo: Int S/G2/M

Age: -

POLR3E 0.952 - - - 0.952 - -

Mlig455_038823 {REF} {Length: 3441} {Pfam: RPC5 protein [PF04801.15, score=269.5]} {Human: ENSG00000284282, POLR3E, RNA polymerase III subunit E, [RH, Score=199, Expect=5e-54]; ENSG00000058600, POLR3E, RNA polymerase III subunit E, [RH, Score=199, Expect=5e-54]} {Mouse: ENSMUSG00000030880, Polr3e, polymerase (RNA) III (DNA directed) polypeptide E, [RH, Score=195, Expect=2e-52]} {Dmel: FBgn0028402, Sin, Sex-lethal interactor, [RH, Score=155, Expect=3e-40]} {Smed: dd_Smed_v6_13212_0_1, dd_Smed_v6_13212_0_1, [RH, Score=67.4, Expect=2e-11]} {RNA1509_8976} {RNA1310_8237.1} {RNA815_1866}

Mlig455_038908 {REF} {Length: 3033} {Pfam: RPC5 protein [PF04801.15, score=269.3]} {Human: ENSG00000284282, POLR3E, RNA polymerase III subunit E, [RH, Score=201, Expect=2e-54]; ENSG00000058600, POLR3E, RNA polymerase III subunit E, [RH, Score=201, Expect=2e-54]} {Mouse: ENSMUSG00000030880, Polr3e, polymerase (RNA) III (DNA directed) polypeptide E, [RH, Score=196, Expect=1e-52]} {Dmel: FBgn0028402, Sin, Sex-lethal interactor, [RH, Score=157, Expect=8e-41]} {Smed: dd_Smed_v6_13212_0_1, dd_Smed_v6_13212_0_1, [RH, Score=65.5, Expect=8e-11]} {RNA1509_41459, RNA1509_8976} {RNA1310_8237.1, RNA1509_41459} {RNA1509_41459, RNA815_1866}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA