TomoSeq data search

Data search

Results for MligTC455_14902

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_14902	67	1.40	Mlig455_029107	Neo: - Age: Up-Down-Up		Mlig455_029107 {REF} {Length: 2212} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=23.9]} {RNA1310_44623.1} {RNA815_21422}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_14902

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.8	1.629	0.99968	1.00000
RegionR2	-0.159	1.629	0.84152	1.00000
RegionR3	1.773	1.629	0.12891	0.61694
RegionR4	0.669	1.629	0.52587	0.85035
RegionR5	0.809	1.629	0.46727	0.82949
RegionR6	1.345	1.629	0.28924	0.88118
RegionR7	2.334	1.629	0.12075	0.65664
RegionR8	-2.97	1.629	0.99952	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.137	1.629	0.99998	1.00000
RegenerationR2	0.222	1.629	0.82308	0.99583
RegenerationR3	1.136	1.629	0.16574	0.59985
RegenerationR4	0.642	1.629	0.45442	0.84434
RegenerationR5	0.835	1.629	0.28331	0.71195
RegenerationR6	0.436	1.629	0.64357	0.89506
RegenerationBL	1.262	1.629	0.45017	0.81715
RegenerationTP	3.075	1.629	0.10139	0.49467

Genes with expression patterns similar to MligTC455_14902

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14902	67	1.4	Mlig455_029107	Neo: - Age: Up-Down-Up		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_029107 {REF} {Length: 2212} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=23.9]} {RNA1310_44623.1} {RNA815_21422}
2.	MligTC455_37298	680	14.17	Mlig455_052018, Mlig455_057237	Neo: - Age: logFC(26M/2M)=-0.343 Region-enriched R3: 2.210/0.00000		1.674	0.708	-	-	0.966	-	-	Mlig455_052018 {REF} {Length: 2901} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA1509_59956} {RNA1310_23555, RNA1509_34561, RNA1509_39488, RNA1509_48225} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA815_9532} Mlig455_057237 {REF} {Length: 2860} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_28177, RNA1509_45524} {RNA1310_23555, RNA1509_28177, RNA1509_45524} {RNA1509_28177, RNA1509_45524, RNA815_9532}
3.	MligTC455_46839	200	4.17	Mlig455_003569	Neo: - Age: Down-Down-Up Region-enriched R3: 3.435/0.00247	LRRC18	0.957	-	-	-	0.957	-	-	Mlig455_003569 {REF} {Length: 4304} {Pfam: Leucine rich repeat [PF13855.8, score=41.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=36.9]; Leucine-rich repeat [PF14580.8, score=18.2]} {Human: ENSG00000165383, LRRC18, leucine rich repeat containing 18, [Score=50.8, Expect=2e-06]; ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=50.8, Expect=3e-06]} {Mouse: ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=55.5, Expect=2e-07]; ENSMUSG00000041673, Lrrc18, leucine rich repeat containing 18, [Score=55.1, Expect=8e-08]} {Dmel: FBgn0010452, trn, tartan, [Score=52.4, Expect=1e-06]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=53.1, Expect=5e-07]} {RNA1509_22318, RNA1509_37547} {RNA1310_14038, RNA1509_22318, RNA1509_37547} {RNA1509_22318, RNA1509_37547, RNA815_17015}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_14902

1.4

Mlig455_029107

Neo: -

Age: Up-Down-Up

1.000

Mlig455_029107 {REF} {Length: 2212} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=23.9]} {RNA1310_44623.1} {RNA815_21422}

MligTC455_37298

680

14.17

Mlig455_052018, Mlig455_057237

Neo: -

Age: logFC(26M/2M)=-0.343

Region-enriched R3: 2.210/0.00000

1.674

0.708

0.966

Mlig455_052018 {REF} {Length: 2901} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA1509_59956} {RNA1310_23555, RNA1509_34561, RNA1509_39488, RNA1509_48225} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA815_9532}

Mlig455_057237 {REF} {Length: 2860} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_28177, RNA1509_45524} {RNA1310_23555, RNA1509_28177, RNA1509_45524} {RNA1509_28177, RNA1509_45524, RNA815_9532}

MligTC455_46839

200

4.17

Mlig455_003569

Neo: -

Age: Down-Down-Up

Region-enriched R3: 3.435/0.00247

LRRC18

0.957

Mlig455_003569 {REF} {Length: 4304} {Pfam: Leucine rich repeat [PF13855.8, score=41.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=36.9]; Leucine-rich repeat [PF14580.8, score=18.2]} {Human: ENSG00000165383, LRRC18, leucine rich repeat containing 18, [Score=50.8, Expect=2e-06]; ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=50.8, Expect=3e-06]} {Mouse: ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=55.5, Expect=2e-07]; ENSMUSG00000041673, Lrrc18, leucine rich repeat containing 18, [Score=55.1, Expect=8e-08]} {Dmel: FBgn0010452, trn, tartan, [Score=52.4, Expect=1e-06]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=53.1, Expect=5e-07]} {RNA1509_22318, RNA1509_37547} {RNA1310_14038, RNA1509_22318, RNA1509_37547} {RNA1509_22318, RNA1509_37547, RNA815_17015}