TomoSeq data search

Data search

Results for MligTC455_15060

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_15060	99	2.05	Mlig455_004526	Neo: - Age: Up-Down-Down Region-enriched R3: 2.221/0.03723	DIRC2	Mlig455_004526 {REF} {Length: 2454} {Pfam: Major Facilitator Superfamily [PF07690.18, score=49.8]} {Human: ENSG00000138463, DIRC2, disrupted in renal carcinoma 2, [Score=180, Expect=1e-50]} {Mouse: ENSMUSG00000022848, Dirc2, disrupted in renal carcinoma 2 (human), [Score=178, Expect=6e-50]} {Celegans: WBGene00007347, C05G5.1, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_12577_0_2, dd_Smed_v6_12577_0_2, [Score=150, Expect=3e-40]} {RNA1509_30880} {RNA1310_16704} {RNA815_16082}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_15060

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.127	2.007	0.85572	1.00000
RegionR2	0.071	2.007	0.74782	1.00000
RegionR3	2.221	2.007	0.00135	0.03723
RegionR4	0.333	2.007	0.57007	0.88836
RegionR5	1.488	2.007	0.02510	0.11395
RegionR6	1.383	2.007	0.07863	0.51898
RegionR7	-5.18	2.007	0.02887	0.32155
RegionR8	-0.189	2.007	0.85269	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.38	2.007	0.46689	1.00000
RegenerationR2	-1.138	2.007	0.25404	0.70064
RegenerationR3	-0.943	2.007	0.16970	0.60449
RegenerationR4	-0.696	2.007	0.37421	0.79690
RegenerationR5	-0.843	2.007	0.17768	0.60676
RegenerationR6	-0.514	2.007	0.50709	0.81135
RegenerationBL	0.672	2.007	0.59932	0.94688
RegenerationTP	1.171	2.007	0.55017	0.93299

Genes with expression patterns similar to MligTC455_15060

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15060	99	2.05	Mlig455_004526	Neo: - Age: Up-Down-Down Region-enriched R3: 2.221/0.03723	DIRC2	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_004526 {REF} {Length: 2454} {Pfam: Major Facilitator Superfamily [PF07690.18, score=49.8]} {Human: ENSG00000138463, DIRC2, disrupted in renal carcinoma 2, [Score=180, Expect=1e-50]} {Mouse: ENSMUSG00000022848, Dirc2, disrupted in renal carcinoma 2 (human), [Score=178, Expect=6e-50]} {Celegans: WBGene00007347, C05G5.1, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_12577_0_2, dd_Smed_v6_12577_0_2, [Score=150, Expect=3e-40]} {RNA1509_30880} {RNA1310_16704} {RNA815_16082}
2.	MligTC455_34462	54	1.13	Mlig455_033965, Mlig455_058027	Neo: Neoblast Age: -	CELF3	0.958	-	-	-	-	0.958	-	Mlig455_033965 {REF} {Length: 634} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=49.7, Expect=5e-07]} Mlig455_058027 {REF} {Length: 2471} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=56.6, Expect=9e-09]; ENSG00000048740, CELF2, CUGBP Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSG00000101489, CELF4, CUGBP Elav-like family member 4, [Score=55.5, Expect=4e-09]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=54.7, Expect=5e-08]; ENSG00000273025, AC009690.3, novel transcript, [Score=54.7, Expect=5e-08]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=54.7, Expect=4e-08]; ENSG00000149187, CELF1, CUGBP Elav-like family member 1, [Score=54.3, Expect=6e-08]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=57.0, Expect=5e-09]; ENSMUSG00000002107, Celf2, CUGBP, Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=55.1, Expect=2e-08]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=54.7, Expect=2e-08]; ENSMUSG00000005506, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]; ENSMUSG00000110883, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=55.5, Expect=7e-09]} {RNA1509_40041} {RNA1310_25362.1, RNA1509_40041} {RNA1509_40041, RNA815_13994}
3.	MligTC455_08301	9	0.19	Mlig455_034387	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_034387 {REF} {Length: 1074} {NoTransDecoderORF} {RNA1509_18523} {RNA1310_13418.1} {RNA815_10309}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_15060

2.05

Mlig455_004526

Neo: -

Age: Up-Down-Down

Region-enriched R3: 2.221/0.03723

DIRC2

1.000

MligTC455_34462

1.13

Mlig455_033965, Mlig455_058027

Neo: Neoblast

Age: -

CELF3

0.958

Mlig455_033965 {REF} {Length: 634} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=49.7, Expect=5e-07]}

Mlig455_058027 {REF} {Length: 2471} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=56.6, Expect=9e-09]; ENSG00000048740, CELF2, CUGBP Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSG00000101489, CELF4, CUGBP Elav-like family member 4, [Score=55.5, Expect=4e-09]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=54.7, Expect=5e-08]; ENSG00000273025, AC009690.3, novel transcript, [Score=54.7, Expect=5e-08]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=54.7, Expect=4e-08]; ENSG00000149187, CELF1, CUGBP Elav-like family member 1, [Score=54.3, Expect=6e-08]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=57.0, Expect=5e-09]; ENSMUSG00000002107, Celf2, CUGBP, Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=55.1, Expect=2e-08]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=54.7, Expect=2e-08]; ENSMUSG00000005506, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]; ENSMUSG00000110883, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=55.5, Expect=7e-09]} {RNA1509_40041} {RNA1310_25362.1, RNA1509_40041} {RNA1509_40041, RNA815_13994}

MligTC455_08301

0.19

Mlig455_034387

Neo: -

Age: -

0.955

Mlig455_034387 {REF} {Length: 1074} {NoTransDecoderORF} {RNA1509_18523} {RNA1310_13418.1} {RNA815_10309}