Data search


search
Exact
Search

Results for MligTC455_15066

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15066 54 1.12 Mlig455_052147

Neo: Irradiation

Age: -

Mlig455_052147 {REF} {Length: 4480} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=36.7]; C2H2-type zinc finger [PF13894.8, score=22.6]} {Mouse: ENSMUSG00000036898, Zfp157, zinc finger protein 157, [Score=52.8, Expect=4e-07]} {RNA1509_37020} {RNA1310_23296, RNA1509_37020} {RNA1509_37020, RNA815_10259}

Cumulative graph for MligTC455_15066

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.98 1.465 0.60982 1.00000
RegionR2 1.17 1.465 0.42800 0.81847
RegionR3 -1.596 1.465 0.99800 1.00000
RegionR4 -0.502 1.465 0.96300 1.00000
RegionR5 1.494 1.465 0.11145 0.32852
RegionR6 0.774 1.465 0.49906 1.00000
RegionR7 0.435 1.465 0.74775 1.00000
RegionR8 1.205 1.465 0.50431 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.843 1.465 0.99995 1.00000
RegenerationR2 -1.455 1.465 0.19120 0.63493
RegenerationR3 2.624 1.465 0.03458 0.33027
RegenerationR4 1.053 1.465 0.39969 0.81333
RegenerationR5 0.075 1.465 0.88194 1.00000
RegenerationR6 -3.533 1.465 0.03155 0.22210
RegenerationBL 1.898 1.465 0.13628 0.43982
RegenerationTP 0.699 1.465 0.63162 0.97826


Genes with expression patterns similar to MligTC455_15066

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15066 54 1.12 Mlig455_052147

Neo: Irradiation

Age: -

5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_052147 {REF} {Length: 4480} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=36.7]; C2H2-type zinc finger [PF13894.8, score=22.6]} {Mouse: ENSMUSG00000036898, Zfp157, zinc finger protein 157, [Score=52.8, Expect=4e-07]} {RNA1509_37020} {RNA1310_23296, RNA1509_37020} {RNA1509_37020, RNA815_10259}
2. MligTC455_46941 90 1.86 Mlig455_050326

Neo: -

Age: -

PDZRN4 0.996 - - 0.996 - - - Mlig455_050326 {REF} {Length: 2636} {Pfam: PDZ domain [PF17820.3, score=82.8]; PDZ domain [PF00595.26, score=70.7]; PDZ domain [PF13180.8, score=31.8]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [RH, Score=96.3, Expect=5e-20]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [Score=100, Expect=2e-21]} {Dmel: FBgn0024728, Slip1, [Score=71.6, Expect=1e-12]} {Celegans: WBGene00016846, C50F7.6, [Score=71.2, Expect=4e-13]} {Smed: dd_Smed_v6_4699_0_1, dd_Smed_v6_4699_0_1, [RH, Score=80.9, Expect=6e-16]} {RNA1310_10358} {RNA815_38642}
3. MligTC455_35674 211 4.4 Mlig455_024962

Neo: -

Age: -

Region-enriched R7: 4.259/0.00000

0.984 - - 0.984 - - - Mlig455_024962 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_50780} {RNA1310_35965, RNA1509_50780} {RNA1509_50780, RNA815_32626.1}
4. MligTC455_03927 6 0.12 Mlig455_049003

Neo: -

Age: -

0.981 - - - - 0.981 - Mlig455_049003 {REF} {Length: 318} {NoTransDecoderORF}
5. MligTC455_52519 43 0.9 Mlig455_036189

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_036189 {REF} {Length: 645} {NoTransDecoderORF} {RNA1310_73064}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA