TomoSeq data search

Data search

Results for MligTC455_15104

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15104

307

6.40

Mlig455_003047, Mlig455_003252

Neo: -

Age: -

Region-enriched R8: 3.054/0.01891
Region-enriched R2: 2.925/0.01862

Mlig455_003047 {REF} {Length: 2239} {RNA1509_8680} {RNA1310_6337.1} {RNA815_5418.1}

Mlig455_003252 {REF} {Length: 2369} {RNA1509_29866, RNA1509_37065, RNA1509_8680} {RNA1310_6337.1, RNA1509_29866, RNA1509_37065, RNA1509_8680} {RNA1509_29866, RNA1509_37065, RNA1509_8680, RNA815_5418.1}

Cumulative graph for MligTC455_15104

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.903	3.113	0.01729	0.36749
RegionR2	2.925	3.113	0.00080	0.01862
RegionR3	1.145	3.113	0.19304	0.73052
RegionR4	-0.32	3.113	0.93377	1.00000
RegionR5	0.234	3.113	0.74919	1.00000
RegionR6	0.894	3.113	0.33675	0.92413
RegionR7	-0.028	3.113	0.86558	1.00000
RegionR8	3.054	3.113	0.00030	0.01891

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	9.882	3.113	0.00530	0.36142
RegenerationR2	0.034	3.113	0.94309	1.00000
RegenerationR3	0.528	3.113	0.47044	0.84433
RegenerationR4	0.81	3.113	0.27714	0.72254
RegenerationR5	1.091	3.113	0.10644	0.49383
RegenerationR6	-0.043	3.113	0.95698	1.00000
RegenerationBL	-0.643	3.113	0.56902	0.92281
RegenerationTP	1.291	3.113	0.11088	0.51219

Genes with expression patterns similar to MligTC455_15104

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15104	307	6.4	Mlig455_003047, Mlig455_003252	Neo: - Age: - Region-enriched R8: 3.054/0.01891 Region-enriched R2: 2.925/0.01862		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003047 {REF} {Length: 2239} {RNA1509_8680} {RNA1310_6337.1} {RNA815_5418.1} Mlig455_003252 {REF} {Length: 2369} {RNA1509_29866, RNA1509_37065, RNA1509_8680} {RNA1310_6337.1, RNA1509_29866, RNA1509_37065, RNA1509_8680} {RNA1509_29866, RNA1509_37065, RNA1509_8680, RNA815_5418.1}
2.	MligTC455_09206	431	8.98	Mlig455_019452	Neo: - Age: Down-Up-Down	ANGPTL2	0.968	-	-	-	-	-	0.968	Mlig455_019452 {REF} {Length: 1549} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=122.0]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=113, Expect=4e-27]; ENSG00000120332, TNN, tenascin N, [Score=113, Expect=1e-26]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=110, Expect=4e-26]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=118, Expect=3e-28]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=114, Expect=2e-27]} {Dmel: FBgn0051832, CG31832, [Score=89.7, Expect=2e-20]} {Celegans: WBGene00017013, ensh-1, [RH, Score=64.3, Expect=4e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=98.2, Expect=4e-22]} {RNA1509_5879, RNA1509_59197} {RNA1310_25624.2, RNA1509_59197} {RNA1509_59197, RNA815_10978}
3.	MligTC455_09205	952	19.83	Mlig455_019338, Mlig455_019551	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.307	ADCY1	0.964	-	-	-	-	-	0.964	Mlig455_019338 {REF} {Length: 7699} {Pfam: Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=169.0]; Adenylyl cyclase N-terminal extracellular and transmembrane region [PF16214.7, score=54.6]} {Human: ENSG00000164742, ADCY1, adenylate cyclase 1, [Score=290, Expect=1e-79]} {Mouse: ENSMUSG00000020431, Adcy1, adenylate cyclase 1, [Score=301, Expect=2e-83]} {Dmel: FBgn0003301, rut, rutabaga, [Score=266, Expect=4e-71]} {Celegans: WBGene00000068, acy-1, Adenylyl CYclase, [Score=115, Expect=3e-25]} {Smed: dd_Smed_v6_4439_0_1, dd_Smed_v6_4439_0_1, [RH, Score=196, Expect=6e-50]} {RNA1509_4969} {RNA1310_375.1} {RNA815_361} Mlig455_019551 {REF} {Length: 8697} {Pfam: Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=170.2]; Adenylyl cyclase N-terminal extracellular and transmembrane region [PF16214.7, score=55.5]} {Human: ENSG00000164742, ADCY1, adenylate cyclase 1, [Score=289, Expect=2e-79]} {Mouse: ENSMUSG00000020431, Adcy1, adenylate cyclase 1, [Score=300, Expect=2e-83]} {Dmel: FBgn0003301, rut, rutabaga, [Score=266, Expect=4e-71]} {Celegans: WBGene00000068, acy-1, Adenylyl CYclase, [Score=115, Expect=3e-25]} {Smed: dd_Smed_v6_4439_0_1, dd_Smed_v6_4439_0_1, [RH, Score=196, Expect=6e-50]} {RNA1509_4969} {RNA1310_375.1} {RNA815_361}
4.	MligTC455_24508	1741	36.26	Mlig455_006045, Mlig455_006046, Mlig455_023285, Mlig455_023286, Mlig455_056744	Neo: - Age: - Region-enriched R3: 2.162/0.00074 Regeneration-depleted BL: -4.650 Regeneration-depleted R3: -3.081		0.964	-	-	-	-	-	0.964	Mlig455_006045 {REF} {Length: 1830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27174, RNA1509_32433, RNA1509_34832, RNA1509_41190} {RNA1310_27054.1, RNA1509_27174, RNA1509_32433, RNA1509_34832, RNA1509_41190} {RNA1509_27174, RNA1509_32433, RNA1509_34832, RNA1509_41190, RNA815_12624.1} Mlig455_006046 {REF} {Length: 1491} {TRANSSPLICED} {RNA1509_41190} {RNA1310_27054.1} {RNA815_12624.1} Mlig455_023285 {REF} {Length: 1780} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41190} {RNA1310_27054.1} {RNA815_12624.1} Mlig455_023286 {REF} {Length: 1781} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41190} {RNA1310_27054.1} {RNA815_12624.1} Mlig455_056744 {REF} {Length: 1491} {TRANSSPLICED} {RNA1509_19154, RNA1509_41190, RNA1509_54970} {RNA1310_27054.1, RNA1509_19154, RNA1509_54970} {RNA1509_19154, RNA1509_54970, RNA815_13840}
5.	MligTC455_29668	147	3.06	Mlig455_033069	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_033069 {REF} {Length: 3514} {RNA1509_51660} {RNA1310_2804} {RNA815_25384}
6.	MligTC455_07586	302	6.29	Mlig455_059282, Mlig455_065216	Neo: - Age: -	CHRNA7	0.951	-	-	-	-	-	0.951	Mlig455_059282 {REF} {Length: 3061} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=212.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=132.3]; Protein of unknown function (DUF812) [PF05667.13, score=20.1]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=5e-87]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=5e-87]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=277, Expect=1e-85]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=275, Expect=3e-85]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=271, Expect=9e-82]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=271, Expect=1e-83]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=268, Expect=3e-82]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=281, Expect=2e-87]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=276, Expect=1e-85]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=272, Expect=2e-84]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=268, Expect=2e-82]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=268, Expect=1e-80]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=294, Expect=1e-91]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=259, Expect=4e-79]} {Smed: dd_Smed_v6_6939_0_3, dd_Smed_v6_6939_0_3, [Score=564, Expect=0.0]} {RNA1509_48605} {RNA1310_10796.1} {RNA815_3826.1} Mlig455_065216 {REF} {Length: 2934} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=212.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=132.4]; Protein of unknown function (DUF812) [PF05667.13, score=21.2]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=283, Expect=9e-88]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=2e-87]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=278, Expect=7e-86]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=276, Expect=6e-86]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=271, Expect=7e-82]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=271, Expect=8e-84]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=269, Expect=2e-82]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=281, Expect=1e-87]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=276, Expect=8e-86]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=271, Expect=2e-84]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=270, Expect=4e-83]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=267, Expect=9e-81]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=295, Expect=4e-92]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=260, Expect=8e-80]} {Smed: dd_Smed_v6_6939_0_1, dd_Smed_v6_6939_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_48605} {RNA1310_10796.1} {RNA815_3826.1}

Berezikov Lab - 2020-2021 © ERIBA