Data search
Results for MligTC455_15121
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15121 | 19 | 0.39 | Mlig455_023352 | Neo: - Age: - |
Mlig455_023352 {REF} {Length: 3654} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=87.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=33.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.1]; Aspartyl protease [PF09668.12, score=20.7]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=207, Expect=6e-58]} {RNA1509_20454} {RNA1310_1238} {RNA815_507.1} |
Cumulative graph for MligTC455_15121
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_15121
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15121 | 19 | 0.39 | Mlig455_023352 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_023352 {REF} {Length: 3654} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=87.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=33.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.1]; Aspartyl protease [PF09668.12, score=20.7]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=207, Expect=6e-58]} {RNA1509_20454} {RNA1310_1238} {RNA815_507.1} |
Berezikov Lab - 2020-2021 © ERIBA