TomoSeq data search

Data search

Results for MligTC455_15261

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_15261	17	0.35	Mlig455_004734	Neo: - Age: -	SLC22A4	Mlig455_004734 {REF} {Length: 2393} {Human: ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=65.9, Expect=5e-11]; ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=63.5, Expect=3e-10]} {Mouse: ENSMUSG00000023829, Slc22a1, solute carrier family 22 (organic cation transporter), member 1, [Score=64.3, Expect=1e-10]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=63.2, Expect=2e-10]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=62.8, Expect=3e-10]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=92.8, Expect=4e-20]} {Celegans: WBGene00015088, B0252.3, Putative transporter B0252.3, [Score=67.4, Expect=3e-12]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=79.3, Expect=7e-16]} {RNA1310_71959.2} {RNA815_64554}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15261

0.35

Mlig455_004734

Neo: -

Age: -

SLC22A4

Mlig455_004734 {REF} {Length: 2393} {Human: ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=65.9, Expect=5e-11]; ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=63.5, Expect=3e-10]} {Mouse: ENSMUSG00000023829, Slc22a1, solute carrier family 22 (organic cation transporter), member 1, [Score=64.3, Expect=1e-10]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=63.2, Expect=2e-10]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=62.8, Expect=3e-10]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=92.8, Expect=4e-20]} {Celegans: WBGene00015088, B0252.3, Putative transporter B0252.3, [Score=67.4, Expect=3e-12]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=79.3, Expect=7e-16]} {RNA1310_71959.2} {RNA815_64554}

Cumulative graph for MligTC455_15261

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.487	0.587	1.00000	1.00000
RegionR2	1.819	0.587	0.99975	1.00000
RegionR3	1.746	0.587	0.99972	1.00000
RegionR4	-0.524	0.587	0.99986	1.00000
RegionR5	-0.335	0.587	0.99994	1.00000
RegionR6	1.147	0.587	0.99996	1.00000
RegionR7	-1.442	0.587	1.00000	1.00000
RegionR8	-0.924	0.587	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.183	0.587	1.00000	1.00000
RegenerationR2	-1.133	0.587	0.06507	0.41779
RegenerationR3	-3.09	0.587	0.99975	1.00000
RegenerationR4	-1.438	0.587	1.00000	1.00000
RegenerationR5	-1.341	0.587	0.99996	1.00000
RegenerationR6	-2.026	0.587	0.99972	1.00000
RegenerationBL	-2.034	0.587	0.99999	1.00000
RegenerationTP	-0.804	0.587	1.00000	1.00000

Genes with expression patterns similar to MligTC455_15261

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15261	17	0.35	Mlig455_004734	Neo: - Age: -	SLC22A4	1	-	-	1.000	-	-	-	Mlig455_004734 {REF} {Length: 2393} {Human: ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=65.9, Expect=5e-11]; ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=63.5, Expect=3e-10]} {Mouse: ENSMUSG00000023829, Slc22a1, solute carrier family 22 (organic cation transporter), member 1, [Score=64.3, Expect=1e-10]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=63.2, Expect=2e-10]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=62.8, Expect=3e-10]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=92.8, Expect=4e-20]} {Celegans: WBGene00015088, B0252.3, Putative transporter B0252.3, [Score=67.4, Expect=3e-12]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=79.3, Expect=7e-16]} {RNA1310_71959.2} {RNA815_64554}
2.	MligTC455_38401	75	1.56	Mlig455_049223	Neo: - Age: Down-Up-Down Region-enriched R2: 4.785/0.03375 Region-enriched R3: 3.449/0.02882		0.996	-	-	0.996	-	-	-	Mlig455_049223 {REF} {Length: 1208} {TRANSSPLICED} {RNA1509_27392} {RNA1310_19016} {RNA815_11860}
3.	MligTC455_13738	250	5.21	Mlig455_048156	Neo: - Age: logFC(26M/2M)=3.366 Regeneration-upregulated R2: 3.348 Regeneration-enriched R2: 3.348		0.967	-	-	0.967	-	-	-	Mlig455_048156 {REF} {Length: 832} {RNA1310_88526} {RNA815_59579}
4.	MligTC455_13930	199	4.15	Mlig455_041651	Neo: - Age: -		0.965	-	-	0.965	-	-	-	Mlig455_041651 {REF} {Length: 173} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58650} {RNA1310_35597} {RNA815_15920.2}
5.	MligTC455_23012	68	1.42	Mlig455_050735, Mlig455_050744	Neo: - Age: logFC(26M/2M)=-0.584	NAXE	0.965	-	-	0.965	-	-	-	Mlig455_050735 {REF} {Length: 2554} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=95.5]} {Human: ENSG00000163382, NAXE, NAD(P)HX epimerase, [Score=194, Expect=3e-59]} {Mouse: ENSMUSG00000028070, Naxe, NAD(P)HX epimerase, [Score=193, Expect=3e-59]} {Dmel: FBgn0030178, CG2974, [Score=166, Expect=2e-49]} {Celegans: WBGene00012476, Y18D10A.3, NAD(P)H-hydrate epimerase, [Score=130, Expect=9e-35]} {Smed: dd_Smed_v6_9067_0_1, dd_Smed_v6_9067_0_1, [Score=196, Expect=6e-61]} {RNA1310_63076} {RNA815_52100} Mlig455_050744 {REF} {Length: 2793} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=95.5]} {Human: ENSG00000163382, NAXE, NAD(P)HX epimerase, [Score=194, Expect=3e-59]} {Mouse: ENSMUSG00000028070, Naxe, NAD(P)HX epimerase, [Score=193, Expect=3e-59]} {Dmel: FBgn0030178, CG2974, [Score=166, Expect=2e-49]} {Celegans: WBGene00012476, Y18D10A.3, NAD(P)H-hydrate epimerase, [Score=130, Expect=9e-35]} {Smed: dd_Smed_v6_9067_0_1, dd_Smed_v6_9067_0_1, [Score=196, Expect=6e-61]} {RNA1310_63076} {RNA815_52100}
6.	MligTC455_24335	62	1.29	Mlig455_006542	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_006542 {REF} {Length: 3028} {NoTransDecoderORF} {RNA1310_45624}