TomoSeq data search

Data search

Results for MligTC455_15388

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_15388	280	5.82	Mlig455_045211	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.263/0.00342	MCM8	Mlig455_045211 {REF} {Length: 2550} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=283.8]; MCM AAA-lid domain [PF17855.3, score=85.4]; MCM OB domain [PF17207.5, score=82.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=35.6]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=29.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.8]} {Human: ENSG00000125885, MCM8, minichromosome maintenance 8 homologous recombination repair factor, [RH, Score=630, Expect=0.0]} {Mouse: ENSMUSG00000027353, Mcm8, minichromosome maintenance 8 homologous recombination repair factor, [RH, Score=640, Expect=0.0]} {Dmel: FBgn0015929, dpa, disc proliferation abnormal, [Score=306, Expect=3e-91]} {Celegans: WBGene00003156, mcm-4, DNA replication licensing factor mcm-4, [Score=300, Expect=2e-89]} {Smed: dd_Smed_v6_22244_0_1, dd_Smed_v6_22244_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_57862} {RNA1310_24626.2, RNA1509_57862} {RNA1509_57862, RNA815_53131}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15388

280

5.82

Mlig455_045211

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 2.263/0.00342

MCM8

Mlig455_045211 {REF} {Length: 2550} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=283.8]; MCM AAA-lid domain [PF17855.3, score=85.4]; MCM OB domain [PF17207.5, score=82.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=35.6]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=29.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.8]} {Human: ENSG00000125885, MCM8, minichromosome maintenance 8 homologous recombination repair factor, [RH, Score=630, Expect=0.0]} {Mouse: ENSMUSG00000027353, Mcm8, minichromosome maintenance 8 homologous recombination repair factor, [RH, Score=640, Expect=0.0]} {Dmel: FBgn0015929, dpa, disc proliferation abnormal, [Score=306, Expect=3e-91]} {Celegans: WBGene00003156, mcm-4, DNA replication licensing factor mcm-4, [Score=300, Expect=2e-89]} {Smed: dd_Smed_v6_22244_0_1, dd_Smed_v6_22244_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_57862} {RNA1310_24626.2, RNA1509_57862} {RNA1509_57862, RNA815_53131}

Cumulative graph for MligTC455_15388

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.578	3.152	0.09073	0.64795
RegionR2	1.238	3.152	0.22391	0.59412
RegionR3	0.733	3.152	0.44370	0.95838
RegionR4	0.972	3.152	0.27273	0.57901
RegionR5	2.263	3.152	0.00025	0.00342
RegionR6	0.092	3.152	0.82165	1.00000
RegionR7	-0.164	3.152	0.90548	1.00000
RegionR8	1.444	3.152	0.24609	0.86321

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.217	3.152	0.99998	1.00000
RegenerationR2	-0.333	3.152	0.55862	0.89787
RegenerationR3	0.456	3.152	0.47188	0.84530
RegenerationR4	0.499	3.152	0.37306	0.79610
RegenerationR5	-0.445	3.152	0.37438	0.78349
RegenerationR6	1.817	3.152	0.00531	0.08807
RegenerationBL	1.355	3.152	0.07144	0.31165
RegenerationTP	0.189	3.152	0.83597	1.00000

Genes with expression patterns similar to MligTC455_15388

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15388	280	5.82	Mlig455_045211	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.263/0.00342	MCM8	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045211 {REF} {Length: 2550} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=283.8]; MCM AAA-lid domain [PF17855.3, score=85.4]; MCM OB domain [PF17207.5, score=82.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=35.6]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=29.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.8]} {Human: ENSG00000125885, MCM8, minichromosome maintenance 8 homologous recombination repair factor, [RH, Score=630, Expect=0.0]} {Mouse: ENSMUSG00000027353, Mcm8, minichromosome maintenance 8 homologous recombination repair factor, [RH, Score=640, Expect=0.0]} {Dmel: FBgn0015929, dpa, disc proliferation abnormal, [Score=306, Expect=3e-91]} {Celegans: WBGene00003156, mcm-4, DNA replication licensing factor mcm-4, [Score=300, Expect=2e-89]} {Smed: dd_Smed_v6_22244_0_1, dd_Smed_v6_22244_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_57862} {RNA1310_24626.2, RNA1509_57862} {RNA1509_57862, RNA815_53131}
2.	MligTC455_46797	401	8.36	Mlig455_029449, Mlig455_029471	Neo: - Age: - Region-enriched R5: 1.378/0.00179		2.649	0.914	-	0.951	-	0.784	-	Mlig455_029449 {REF} {Length: 2616} {TRANSSPLICED} {Pfam: DBF zinc finger [PF07535.14, score=45.5]} {RNA1509_27580} {RNA1310_10178} {RNA815_13480} Mlig455_029471 {REF} {Length: 2833} {Pfam: DBF zinc finger [PF07535.14, score=45.2]} {RNA1509_22062, RNA1509_27580} {RNA1310_10178, RNA1509_22062, RNA1509_27580} {RNA1509_22062, RNA1509_27580, RNA815_13480}
3.	MligTC455_48745	566	11.79	Mlig455_033681, Mlig455_050139	Neo: - Age: logFC(26M/2M)=0.794 Region-enriched R4: 2.158/0.03550	PPP1R10	0.956	-	-	-	0.956	-	-	Mlig455_033681 {REF} {Length: 3326} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173, RNA1509_7573} {RNA1509_7573, RNA815_6778} Mlig455_050139 {REF} {Length: 3325} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173} {RNA815_6778}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_15388

280

5.82

Mlig455_045211

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 2.263/0.00342

MCM8

1.000

MligTC455_46797

401

8.36

Mlig455_029449, Mlig455_029471

Neo: -

Age: -

Region-enriched R5: 1.378/0.00179

2.649

0.914

0.951

0.784

Mlig455_029449 {REF} {Length: 2616} {TRANSSPLICED} {Pfam: DBF zinc finger [PF07535.14, score=45.5]} {RNA1509_27580} {RNA1310_10178} {RNA815_13480}

Mlig455_029471 {REF} {Length: 2833} {Pfam: DBF zinc finger [PF07535.14, score=45.2]} {RNA1509_22062, RNA1509_27580} {RNA1310_10178, RNA1509_22062, RNA1509_27580} {RNA1509_22062, RNA1509_27580, RNA815_13480}

MligTC455_48745

566

11.79

Mlig455_033681, Mlig455_050139

Neo: -

Age: logFC(26M/2M)=0.794

Region-enriched R4: 2.158/0.03550

PPP1R10

0.956

Mlig455_033681 {REF} {Length: 3326} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173, RNA1509_7573} {RNA1509_7573, RNA815_6778}

Mlig455_050139 {REF} {Length: 3325} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173} {RNA815_6778}