Data search
Results for MligTC455_15579
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15579 | 34 | 0.70 | Mlig455_027463 | Neo: - Age: Up-Down-Up |
TRIM2 | Mlig455_027463 {REF} {Length: 2668} {Pfam: NHL repeat [PF01436.23, score=116.1]; 6-bladed beta-propeller [PF17170.6, score=46.9]; Filamin/ABP280 repeat [PF00630.21, score=28.6]; SMP-30/Gluconolactonase/LRE-like region [PF08450.14, score=28.5]; Domain of unknown function (DUF4934) [PF16288.7, score=24.2]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=373, Expect=7e-119]; ENSG00000110171, TRIM3, tripartite motif containing 3, [RH, Score=362, Expect=5e-116]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [RH, Score=372, Expect=7e-119]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [RH, Score=362, Expect=7e-115]} {Dmel: FBgn0265356, tn, thin, [Score=178, Expect=1e-46]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=127, Expect=2e-30]} {Smed: dd_Smed_v6_12812_0_1, dd_Smed_v6_12812_0_1, [RH, Score=236, Expect=5e-70]} {RNA1310_31068} {RNA815_49839} |
Cumulative graph for MligTC455_15579
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.765 | 1.072 | 0.99956 | 1.00000 | |
| RegionR2 | -0.481 | 1.072 | 0.62163 | 0.96555 | |
| RegionR3 | 2.05 | 1.072 | 0.04778 | 0.38282 | |
| RegionR4 | 2.228 | 1.072 | 0.11470 | 0.33674 | |
| RegionR5 | -1.421 | 1.072 | 0.99956 | 1.00000 | |
| RegionR6 | -2.303 | 1.072 | 0.99957 | 1.00000 | |
| RegionR7 | 2.253 | 1.072 | 0.12780 | 0.67339 | |
| RegionR8 | -1.561 | 1.072 | 0.99963 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.181 | 1.072 | 0.99997 | 1.00000 | |
| RegenerationR2 | 1.053 | 1.072 | 0.26182 | 0.70865 | |
| RegenerationR3 | -1.368 | 1.072 | 0.17609 | 0.61176 | |
| RegenerationR4 | -0.266 | 1.072 | 0.88163 | 1.00000 | |
| RegenerationR5 | 2.794 | 1.072 | 0.02782 | 0.28145 | |
| RegenerationR6 | 2.539 | 1.072 | 0.15185 | 0.47749 | |
| RegenerationBL | 1.368 | 1.072 | 0.36584 | 0.73416 | |
| RegenerationTP | 2.317 | 1.072 | 0.30600 | 0.75118 |
Genes with expression patterns similar to MligTC455_15579
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15579 | 34 | 0.7 | Mlig455_027463 | Neo: - Age: Up-Down-Up |
TRIM2 | 3 | - | - | 1.000 | - | 1.000 | 1.000 | Mlig455_027463 {REF} {Length: 2668} {Pfam: NHL repeat [PF01436.23, score=116.1]; 6-bladed beta-propeller [PF17170.6, score=46.9]; Filamin/ABP280 repeat [PF00630.21, score=28.6]; SMP-30/Gluconolactonase/LRE-like region [PF08450.14, score=28.5]; Domain of unknown function (DUF4934) [PF16288.7, score=24.2]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=373, Expect=7e-119]; ENSG00000110171, TRIM3, tripartite motif containing 3, [RH, Score=362, Expect=5e-116]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [RH, Score=372, Expect=7e-119]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [RH, Score=362, Expect=7e-115]} {Dmel: FBgn0265356, tn, thin, [Score=178, Expect=1e-46]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=127, Expect=2e-30]} {Smed: dd_Smed_v6_12812_0_1, dd_Smed_v6_12812_0_1, [RH, Score=236, Expect=5e-70]} {RNA1310_31068} {RNA815_49839} |
| 2. | MligTC455_22923 | 53 | 1.1 | Mlig455_068434 | Neo: - Age: Down-Up-Down |
MYLK3 | 1.787 | - | - | 0.969 | - | - | 0.818 | Mlig455_068434 {REF} {Length: 2249} {Pfam: Protein kinase domain [PF00069.27, score=28.7]} {Human: ENSG00000140795, MYLK3, myosin light chain kinase 3, [Score=49.7, Expect=1e-07]} {Mouse: ENSMUSG00000031698, Mylk3, myosin light chain kinase 3, [Score=49.7, Expect=9e-08]} {Dmel: FBgn0265045, Strn-Mlck, Stretchin-Mlck, [Score=48.5, Expect=1e-07]} {Smed: dd_Smed_v6_8041_0_1, dd_Smed_v6_8041_0_1, [Score=49.3, Expect=4e-08]} {RNA1509_36787} {RNA1310_62109} {RNA815_9443} |
| 3. | MligTC455_39366 | 61 | 1.28 | Mlig455_048163 | Neo: - Age: - |
0.981 | - | - | 0.981 | - | - | - | Mlig455_048163 {REF} {Length: 3265} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.8]} {RNA1509_21488} {RNA1310_52319.1} {RNA815_17448} | |
| 4. | MligTC455_06857 | 15 | 0.31 | Mlig455_056014 | Neo: - Age: - |
0.98 | - | - | - | - | 0.980 | - | Mlig455_056014 {REF} {Length: 339} {NoTransDecoderORF} {RNA1509_49310} {RNA1310_52194} {RNA815_60424} | |
| 5. | MligTC455_53979 | 10 | 0.21 | Mlig455_056897 | Neo: - Age: - |
0.974 | - | - | - | - | - | 0.974 | Mlig455_056897 {REF} {Length: 941} {NoTransDecoderORF} {RNA1310_34391} | |
| 6. | MligTC455_06295 | 178 | 3.7 | Mlig455_007554, Mlig455_011810, Mlig455_013188 | Neo: - Age: logFC(26M/2M)=-0.489 |
RDH12 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_007554 {REF} {Length: 2179} {Pfam: short chain dehydrogenase [PF00106.27, score=73.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=39.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=134, Expect=2e-36]; ENSG00000240857, RDH14, retinol dehydrogenase 14, [Score=134, Expect=4e-36]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=138, Expect=9e-38]} {Dmel: FBgn0033205, CG2064, [Score=129, Expect=2e-34]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=101, Expect=2e-24]} {Smed: dd_Smed_v6_11283_0_1, dd_Smed_v6_11283_0_1, [Score=121, Expect=1e-31]} {RNA1310_44802} {RNA815_47495} Mlig455_011810 {REF} {Length: 2033} {Pfam: short chain dehydrogenase [PF00106.27, score=73.4]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=41.5]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=141, Expect=1e-38]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=137, Expect=3e-37]; ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=133, Expect=1e-35]} {Dmel: FBgn0029866, CG3842, [Score=134, Expect=2e-35]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=99.8, Expect=1e-23]} {Smed: dd_Smed_v6_11283_0_1, dd_Smed_v6_11283_0_1, [Score=117, Expect=5e-30]} {RNA1310_45617} {RNA815_47495} Mlig455_013188 {REF} {Length: 2164} {Pfam: short chain dehydrogenase [PF00106.27, score=72.3]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=40.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=139, Expect=6e-38]} {Mouse: ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=137, Expect=3e-37]; ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=135, Expect=2e-36]} {Dmel: FBgn0029866, CG3842, [Score=135, Expect=9e-36]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=100, Expect=5e-24]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=115, Expect=2e-29]} {RNA1310_45617} {RNA815_47495} |
| 7. | MligTC455_21915 | 22 | 0.47 | Mlig455_054000 | Neo: - Age: - |
0.969 | - | - | - | - | - | 0.969 | Mlig455_054000 {REF} {Length: 5951} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13895.8, score=24.1]; Immunoglobulin domain [PF13927.8, score=20.9]; Syndecan domain [PF01034.22, score=19.1]} {RNA1509_17492} {RNA1310_2574} {RNA815_1554} | |
| 8. | MligTC455_38077 | 195 | 4.05 | Mlig455_062133 | Neo: - Age: - |
TAF2 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_062133 {REF} {Length: 4471} {TRANSSPLICED} {Pfam: Peptidase M1 N-terminal domain [PF17900.3, score=22.1]} {Human: ENSG00000064313, TAF2, TATA-box binding protein associated factor 2, [RH, Score=828, Expect=0.0]} {Mouse: ENSMUSG00000037343, Taf2, TATA-box binding protein associated factor 2, [RH, Score=824, Expect=0.0]} {Dmel: FBgn0011836, Taf2, TBP-associated factor 2, [RH, Score=729, Expect=0.0]} {Celegans: WBGene00006383, taf-2, Transcription initiation factor TFIID subunit 2, [RH, Score=444, Expect=3e-137]} {Smed: dd_Smed_v6_7405_0_1, dd_Smed_v6_7405_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_31503} {RNA1310_14876} {RNA815_3775} |
| 9. | MligTC455_38099 | 45 | 0.94 | Mlig455_051872 | Neo: - Age: - |
0.967 | - | - | 0.967 | - | - | - | Mlig455_051872 {REF} {Length: 1845} {RNA1310_27388} {RNA815_9537} | |
| 10. | MligTC455_29621 | 35 | 0.73 | Mlig455_046819 | Neo: - Age: - Region-enriched R4: 5.793/0.00181 |
KSR1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_046819 {REF} {Length: 4347} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.8]; Protein kinase domain [PF00069.27, score=65.1]; Kinase-like [PF14531.8, score=20.2]} {Human: ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=126, Expect=2e-29]; ENSG00000171435, KSR2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=130, Expect=8e-31]; ENSMUSG00000061578, Ksr2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Dmel: FBgn0015402, ksr, kinase suppressor of ras, [Score=152, Expect=9e-38]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [RH, Score=331, Expect=1e-102]} {RNA1509_38394} {RNA1310_3636, RNA1509_38394} {RNA1509_38394, RNA815_15015.1} |
| 11. | MligTC455_41803 | 24 | 0.5 | Mlig455_001656 | Neo: - Age: - |
TBL1XR1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_001656 {REF} {Length: 1963} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=105.4]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=40.8]; Coatomer WD associated region [PF04053.16, score=26.2]; LisH [PF08513.13, score=24.5]} {Human: ENSG00000177565, TBL1XR1, transducin beta like 1 X-linked receptor 1, [RH, Score=689, Expect=0.0]; ENSG00000101849, TBL1X, transducin beta like 1 X-linked, [RH, Score=684, Expect=0.0]; ENSG00000092377, TBL1Y, transducin beta like 1 Y-linked, [RH, Score=677, Expect=0.0]} {Mouse: ENSMUSG00000027630, Tbl1xr1, transducin (beta)-like 1X-linked receptor 1, [RH, Score=694, Expect=0.0]; ENSMUSG00000025246, Tbl1x, transducin (beta)-like 1 X-linked, [RH, Score=684, Expect=0.0]} {Dmel: FBgn0263933, ebi, [RH, Score=573, Expect=0.0]} {Celegans: WBGene00021074, W07E6.2, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3247_0_1, dd_Smed_v6_3247_0_1, [RH, Score=519, Expect=2e-180]} {RNA1509_57475} {RNA1310_6496.1, RNA1509_57475} {RNA1509_57475, RNA815_1670} |
| 12. | MligTC455_27101 | 98 | 2.04 | Mlig455_030183 | Neo: - |
URGCP | 0.959 | - | - | - | - | - | 0.959 | Mlig455_030183 {REF} {Length: 5914} {Pfam: Mediator complex subunit 25 von Willebrand factor type A [PF11265.10, score=24.4]; Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=24.3]; Dynamin family [PF00350.25, score=21.9]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=20.4]; 50S ribosome-binding GTPase [PF01926.25, score=20.1]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=124, Expect=6e-28]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=402, Expect=4e-115]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=400, Expect=2e-114]} {RNA1509_16396} {RNA1310_766.1} {RNA815_2094.1} |
| 13. | MligTC455_37780 | 169 | 3.52 | Mlig455_010706 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_010706 {REF} {Length: 723} {RNA1310_80804} | |
| 14. | MligTC455_22056 | 44 | 0.91 | Mlig455_002130 | Neo: - Age: Up-Down-Up |
DHX38 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_002130 {REF} {Length: 5123} {Pfam: WWE domain [PF02825.22, score=85.5]; Helicase conserved C-terminal domain [PF00271.33, score=47.2]; Helicase associated domain (HA2) [PF04408.25, score=27.8]} {Human: ENSG00000140829, DHX38, DEAH-box helicase 38, [Score=258, Expect=2e-70]; ENSG00000067596, DHX8, DEAH-box helicase 8, [Score=248, Expect=6e-67]} {Mouse: ENSMUSG00000037993, Dhx38, DEAH (Asp-Glu-Ala-His) box polypeptide 38, [Score=259, Expect=1e-70]; ENSMUSG00000034931, Dhx8, DEAH (Asp-Glu-Ala-His) box polypeptide 8, [Score=248, Expect=5e-67]} {Dmel: FBgn0086895, pea, peanuts, [Score=243, Expect=1e-65]} {Celegans: WBGene00003389, mog-1, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1, [Score=265, Expect=4e-73]} {Smed: dd_Smed_v6_9191_0_1, dd_Smed_v6_9191_0_1, [Score=249, Expect=1e-71]} {RNA1509_29316} {RNA1310_42675} {RNA815_24379} |
| 15. | MligTC455_04474 | 114 | 2.37 | Mlig455_039605 | Neo: - Age: logFC(26M/2M)=-0.389 Region-enriched R8: 5.608/0.00012 |
HMCN1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_039605 {REF} {Length: 4319} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=405.5]; Spondin-like TSP1 domain [PF19028.2, score=340.3]; Thrombospondin type 1 domain [PF19030.2, score=125.1]; Scavenger receptor cysteine-rich domain [PF00530.20, score=57.7]; CCN3 Nov like TSP1 domain [PF19035.2, score=48.4]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=292, Expect=4e-80]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=288, Expect=7e-79]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=156, Expect=3e-38]} {Celegans: WBGene00016468, C36B7.5, [RH, Score=199, Expect=7e-52]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=264, Expect=9e-72]} {RNA1509_12135} {RNA1310_3277, RNA1509_12135} {RNA1509_12135, RNA815_5276} |
| 16. | MligTC455_36940 | 103 | 2.14 | Mlig455_052336 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_052336 {REF} {Length: 1907} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.0]; RING-type zinc-finger [PF13445.8, score=33.0]; Ring finger domain [PF13639.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.5]; U-box domain [PF04564.17, score=21.1]; zinc-RING finger domain [PF14634.8, score=19.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=18.7]} {RNA1509_20101} {RNA1310_35271} {RNA815_15447.1} | |
| 17. | MligTC455_30850 | 34 | 0.71 | Mlig455_019341, Mlig455_019556 | Neo: - Age: logFC(26M/2M)=-0.625 |
GRIK2, GRIK4 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_019341 {REF} {Length: 3886} {Pfam: Ligand-gated ion channel [PF00060.28, score=95.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=54.6]; Receptor family ligand binding region [PF01094.30, score=53.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=24.1]; Iron-containing alcohol dehydrogenase [PF13685.8, score=22.3]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=160, Expect=8e-40]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=157, Expect=6e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=152, Expect=3e-37]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=160, Expect=4e-40]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=155, Expect=2e-38]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=153, Expect=6e-38]} {Dmel: FBgn0039927, CG11155, [Score=179, Expect=3e-46]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=136, Expect=1e-32]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=257, Expect=5e-78]} {RNA1509_10728} {RNA1310_122.1} {RNA815_8415.1} Mlig455_019556 {REF} {Length: 4135} {Pfam: Ligand-gated ion channel [PF00060.28, score=96.3]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=54.5]; Receptor family ligand binding region [PF01094.30, score=39.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=24.1]; Iron-containing alcohol dehydrogenase [PF13685.8, score=19.4]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=155, Expect=3e-38]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=150, Expect=8e-37]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=149, Expect=2e-36]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=154, Expect=5e-38]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=149, Expect=1e-36]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=149, Expect=1e-36]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=147, Expect=4e-36]} {Dmel: FBgn0039927, CG11155, [Score=169, Expect=3e-43]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=136, Expect=1e-32]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=259, Expect=1e-78]} {RNA1509_10728} {RNA1310_31364} {RNA815_8415.1} |
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