TomoSeq data search

Data search

Results for MligTC455_15706

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15706

107

2.22

Mlig455_001675

Neo: -

Age: -

EGR1

Mlig455_001675 {REF} {Length: 3353} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=58.2]; Zinc-finger double domain [PF13465.8, score=54.1]; C2H2-type zinc finger [PF13894.8, score=42.4]; C2H2-type zinc finger [PF13912.8, score=27.9]; C2H2-type zinc-finger domain [PF13909.8, score=27.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=23.8]; Zinc ribbon domain [PF09723.12, score=23.2]} {Human: ENSG00000120738, EGR1, early growth response 1, [Score=99.8, Expect=9e-24]; ENSG00000196456, ZNF775, zinc finger protein 775, [Score=96.7, Expect=1e-22]; ENSG00000122877, EGR2, early growth response 2, [Score=96.3, Expect=1e-22]; ENSG00000179388, EGR3, early growth response 3, [Score=95.9, Expect=9e-23]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=95.5, Expect=4e-22]; ENSG00000135625, EGR4, early growth response 4, [Score=95.1, Expect=3e-22]} {Mouse: ENSMUSG00000038418, Egr1, early growth response 1, [Score=99.8, Expect=6e-24]; ENSMUSG00000033730, Egr3, early growth response 3, [Score=96.3, Expect=5e-23]; ENSMUSG00000071341, Egr4, early growth response 4, [Score=95.5, Expect=2e-22]} {Dmel: FBgn0013469, klu, klumpfuss, [RH, Score=133, Expect=1e-35]} {Celegans: WBGene00013970, klu-1, KLUmpfuss related, [RH, Score=131, Expect=1e-35]} {Smed: dd_Smed_v6_16277_0_1, dd_Smed_v6_16277_0_1, [Score=128, Expect=2e-35]} {RNA1509_54151} {RNA1310_41527.1} {RNA815_23371.2}

Cumulative graph for MligTC455_15706

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.279	2.098	0.41578	1.00000
RegionR2	-0.023	2.098	0.87010	1.00000
RegionR3	0.187	2.098	0.78561	1.00000
RegionR4	1.497	2.098	0.18764	0.46146
RegionR5	0.659	2.098	0.50353	0.86687
RegionR6	0.606	2.098	0.55898	1.00000
RegionR7	1.362	2.098	0.21368	0.83016
RegionR8	-0.01	2.098	0.87291	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.272	2.098	0.99999	1.00000
RegenerationR2	0.681	2.098	0.32389	0.76181
RegenerationR3	-0.718	2.098	0.40892	0.80771
RegenerationR4	-1.273	2.098	0.14827	0.57556
RegenerationR5	-0.348	2.098	0.65205	0.93305
RegenerationR6	-0.837	2.098	0.34652	0.69193
RegenerationBL	-1.794	2.098	0.19437	0.53028
RegenerationTP	-2.076	2.098	0.13466	0.55144

Genes with expression patterns similar to MligTC455_15706

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15706	107	2.22	Mlig455_001675	Neo: - Age: -	EGR1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001675 {REF} {Length: 3353} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=58.2]; Zinc-finger double domain [PF13465.8, score=54.1]; C2H2-type zinc finger [PF13894.8, score=42.4]; C2H2-type zinc finger [PF13912.8, score=27.9]; C2H2-type zinc-finger domain [PF13909.8, score=27.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=23.8]; Zinc ribbon domain [PF09723.12, score=23.2]} {Human: ENSG00000120738, EGR1, early growth response 1, [Score=99.8, Expect=9e-24]; ENSG00000196456, ZNF775, zinc finger protein 775, [Score=96.7, Expect=1e-22]; ENSG00000122877, EGR2, early growth response 2, [Score=96.3, Expect=1e-22]; ENSG00000179388, EGR3, early growth response 3, [Score=95.9, Expect=9e-23]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=95.5, Expect=4e-22]; ENSG00000135625, EGR4, early growth response 4, [Score=95.1, Expect=3e-22]} {Mouse: ENSMUSG00000038418, Egr1, early growth response 1, [Score=99.8, Expect=6e-24]; ENSMUSG00000033730, Egr3, early growth response 3, [Score=96.3, Expect=5e-23]; ENSMUSG00000071341, Egr4, early growth response 4, [Score=95.5, Expect=2e-22]} {Dmel: FBgn0013469, klu, klumpfuss, [RH, Score=133, Expect=1e-35]} {Celegans: WBGene00013970, klu-1, KLUmpfuss related, [RH, Score=131, Expect=1e-35]} {Smed: dd_Smed_v6_16277_0_1, dd_Smed_v6_16277_0_1, [Score=128, Expect=2e-35]} {RNA1509_54151} {RNA1310_41527.1} {RNA815_23371.2}
2.	MligTC455_22437	38	0.78	Mlig455_052007	Neo: - Age: Up-Down-Down	ANKRD29	0.974	-	-	0.974	-	-	-	Mlig455_052007 {REF} {Length: 3551} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.7]; Ankyrin repeats (many copies) [PF13637.8, score=89.6]; Ankyrin repeat [PF00023.32, score=88.9]; Ankyrin repeats (many copies) [PF13857.8, score=86.1]; Ankyrin repeat [PF13606.8, score=78.2]; Mab-21 protein [PF03281.16, score=34.4]} {Human: ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=120, Expect=2e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=119, Expect=2e-26]; ENSG00000145362, ANK2, ankyrin 2, [Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=118, Expect=2e-26]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=115, Expect=8e-26]} {Dmel: FBgn0031473, CG3104, [Score=119, Expect=5e-29]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=112, Expect=6e-25]} {Smed: dd_Smed_v6_12936_0_1, dd_Smed_v6_12936_0_1, [Score=107, Expect=1e-23]} {RNA1509_35078} {RNA1310_25151} {RNA815_51502}
3.	MligTC455_25734	38	0.78	Mlig455_039452	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_039452 {REF} {Length: 1033} {NoTransDecoderORF} {RNA1509_32652} {RNA1310_131301} {RNA815_5359.1}
4.	MligTC455_33012	7	0.15	Mlig455_059455	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_059455 {REF} {Length: 1791} {Smed: dd_Smed_v6_15458_0_1, dd_Smed_v6_15458_0_1, [Score=82.4, Expect=2e-16]} {RNA1310_13402} {RNA815_27864}
5.	MligTC455_33181	182	3.8	Mlig455_051852	Neo: - Age: logFC(26M/2M)=-0.447 Region-enriched R4: 3.758/0.00064	ANK2	0.958	-	-	-	-	-	0.958	Mlig455_051852 {REF} {Length: 6275} {tRNA: Val(CAC),pseudo, score=24.2} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=293.9]; Ankyrin repeat [PF00023.32, score=250.2]; Ankyrin repeats (many copies) [PF13637.8, score=211.1]; Ankyrin repeats (many copies) [PF13857.8, score=208.5]; Ankyrin repeat [PF13606.8, score=182.9]; Mab-21 protein [PF03281.16, score=26.3]; PEGA domain [PF08308.13, score=20.9]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=258, Expect=2e-69]; ENSG00000029534, ANK1, ankyrin 1, [Score=258, Expect=2e-69]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=252, Expect=1e-67]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=245, Expect=2e-65]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=235, Expect=2e-66]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=242, Expect=7e-65]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [RH, Score=220, Expect=1e-60]} {RNA1509_19838, RNA1509_44937} {RNA1310_3403, RNA1509_19838, RNA1509_44937} {RNA1509_19838, RNA1509_44937, RNA815_1217}
6.	MligTC455_54332	77	1.61	Mlig455_067675	Neo: - Age: Up-Down-Down	BMP1	0.957	-	-	-	-	0.957	-	Mlig455_067675 {REF} {Length: 4231} {Pfam: CUB domain [PF00431.22, score=166.3]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=79.3, Expect=2e-14]} {Dmel: FBgn0261262, CG42613, [Score=90.1, Expect=4e-18]} {Celegans: WBGene00004944, sol-1, Suppressor of lurcher protein 1, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=258, Expect=1e-73]} {RNA1509_49729} {RNA1310_14031} {RNA815_23434}
7.	MligTC455_44741	15	0.31	Mlig455_058956	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_058956 {REF} {Length: 1823} {Pfam: Caspase domain [PF00656.24, score=30.6]} {RNA1509_48421} {RNA1310_20861} {RNA815_10446}
8.	MligTC455_34923	61	1.28	Mlig455_036365	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_036365 {REF} {Length: 4040} {NoTransDecoderORF} {RNA1509_49304} {RNA1310_340.1} {RNA815_1857}
9.	MligTC455_53230	205	4.26	Mlig455_010227	Neo: - Age: - Region-enriched R3: 3.065/0.00637		0.951	-	-	-	-	-	0.951	Mlig455_010227 {REF} {Length: 1776} {Pfam: CD20-like family [PF04103.17, score=26.9]; SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=22.2]} {RNA1310_112810} {RNA815_19811}

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