TomoSeq data search

Data search

Results for MligTC455_15774

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15774

631

13.15

Mlig455_036179

Neo: -

Age: -

CASKIN1

Mlig455_036179 {REF} {Length: 5451} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=115.5]; Ankyrin repeats (many copies) [PF13637.8, score=81.0]; Ankyrin repeat [PF00023.32, score=76.8]; Ankyrin repeats (many copies) [PF13857.8, score=76.2]; Ankyrin repeat [PF13606.8, score=66.5]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=108, Expect=3e-23]; ENSG00000177303, CASKIN2, CASK interacting protein 2, [Score=104, Expect=3e-22]; ENSG00000185046, ANKS1B, ankyrin repeat and sterile alpha motif domain containing 1B, [Score=103, Expect=8e-22]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=108, Expect=2e-23]; ENSMUSG00000058589, Anks1b, ankyrin repeat and sterile alpha motif domain containing 1B, [Score=104, Expect=2e-22]; ENSMUSG00000034471, Caskin2, CASK-interacting protein 2, [Score=103, Expect=7e-22]} {Dmel: FBgn0039075, CG4393, [Score=104, Expect=2e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=90.9, Expect=3e-18]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=86.7, Expect=3e-17]} {RNA1509_18162} {RNA1310_5192} {RNA815_1530}

Cumulative graph for MligTC455_15774

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.271	4.012	0.35154	0.99464
RegionR2	-0.543	4.012	0.30671	0.69728
RegionR3	0.071	4.012	0.86555	1.00000
RegionR4	1.112	4.012	0.03843	0.16127
RegionR5	0.825	4.012	0.03609	0.14795
RegionR6	0.508	4.012	0.23110	0.81566
RegionR7	-0.021	4.012	0.97152	1.00000
RegionR8	-0.682	4.012	0.35917	0.99346

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.887	4.012	0.25403	0.96756
RegenerationR2	0.335	4.012	0.41288	0.82247
RegenerationR3	-0.114	4.012	0.80309	0.98344
RegenerationR4	-0.184	4.012	0.70458	0.95542
RegenerationR5	-0.268	4.012	0.52736	0.87320
RegenerationR6	-0.242	4.012	0.59694	0.86720
RegenerationBL	0.407	4.012	0.42956	0.79764
RegenerationTP	0.167	4.012	0.78770	1.00000

Genes with expression patterns similar to MligTC455_15774

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15774	631	13.15	Mlig455_036179	Neo: - Age: -	CASKIN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036179 {REF} {Length: 5451} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=115.5]; Ankyrin repeats (many copies) [PF13637.8, score=81.0]; Ankyrin repeat [PF00023.32, score=76.8]; Ankyrin repeats (many copies) [PF13857.8, score=76.2]; Ankyrin repeat [PF13606.8, score=66.5]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=108, Expect=3e-23]; ENSG00000177303, CASKIN2, CASK interacting protein 2, [Score=104, Expect=3e-22]; ENSG00000185046, ANKS1B, ankyrin repeat and sterile alpha motif domain containing 1B, [Score=103, Expect=8e-22]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=108, Expect=2e-23]; ENSMUSG00000058589, Anks1b, ankyrin repeat and sterile alpha motif domain containing 1B, [Score=104, Expect=2e-22]; ENSMUSG00000034471, Caskin2, CASK-interacting protein 2, [Score=103, Expect=7e-22]} {Dmel: FBgn0039075, CG4393, [Score=104, Expect=2e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=90.9, Expect=3e-18]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=86.7, Expect=3e-17]} {RNA1509_18162} {RNA1310_5192} {RNA815_1530}
2.	MligTC455_15773	573	11.94	Mlig455_005552	Neo: - Age: - Region-enriched R5: 1.742/0.02283	CASKIN1	4.82	0.893	0.985	-	0.983	0.990	0.969	Mlig455_005552 {REF} {Length: 5674} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=123.0]; Ankyrin repeats (many copies) [PF13637.8, score=77.1]; Ankyrin repeat [PF00023.32, score=75.4]; Ankyrin repeats (many copies) [PF13857.8, score=70.9]; Ankyrin repeat [PF13606.8, score=65.1]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=107, Expect=6e-23]; ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=103, Expect=6e-22]; ENSG00000177303, CASKIN2, CASK interacting protein 2, [Score=103, Expect=8e-22]; ENSG00000185046, ANKS1B, ankyrin repeat and sterile alpha motif domain containing 1B, [Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=106, Expect=6e-23]; ENSMUSG00000058589, Anks1b, ankyrin repeat and sterile alpha motif domain containing 1B, [Score=104, Expect=3e-22]; ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=101, Expect=1e-21]; ENSMUSG00000034471, Caskin2, CASK-interacting protein 2, [Score=101, Expect=2e-21]} {Dmel: FBgn0039075, CG4393, [Score=103, Expect=5e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=92.0, Expect=1e-18]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=85.5, Expect=1e-16]} {RNA1509_18162} {RNA1310_5014.1, RNA1509_18162} {RNA1509_18162, RNA815_1530}
3.	MligTC455_29286	1349	28.11	Mlig455_016468	Neo: - Age: -	KTN1	1.802	-	-	0.852	-	0.950	-	Mlig455_016468 {REF} {Length: 6708} {TRANSSPLICED} {Human: ENSG00000126777, KTN1, kinectin 1, [RH, Score=57.4, Expect=1e-07]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=56.6, Expect=2e-07]} {Smed: dd_Smed_v6_1111_0_1, dd_Smed_v6_1111_0_1, [RH, Score=102, Expect=3e-22]} {RNA1509_11298} {RNA1310_4678} {RNA815_2519}
4.	MligTC455_19046	505	10.52	Mlig455_051093	Neo: Irradiation Age: -	GSK3B	0.956	-	-	-	-	0.956	-	Mlig455_051093 {REF} {Length: 2924} {Pfam: Protein kinase domain [PF00069.27, score=225.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.9]; Kinase-like [PF14531.8, score=23.3]; ABC1 atypical kinase-like domain [PF03109.18, score=21.3]; Phosphotransferase enzyme family [PF01636.25, score=18.9]} {Human: ENSG00000082701, GSK3B, glycogen synthase kinase 3 beta, [Score=549, Expect=0.0]; ENSG00000105723, GSK3A, glycogen synthase kinase 3 alpha, [Score=539, Expect=0.0]} {Mouse: ENSMUSG00000022812, Gsk3b, glycogen synthase kinase 3 beta, [Score=548, Expect=0.0]; ENSMUSG00000057177, Gsk3a, glycogen synthase kinase 3 alpha, [Score=523, Expect=0.0]} {Dmel: FBgn0003371, sgg, shaggy, [Score=527, Expect=0.0]} {Celegans: WBGene00001746, gsk-3, Glycogen synthase kinase-3, [RH, Score=483, Expect=2e-171]} {Smed: dd_Smed_v6_4762_0_1, dd_Smed_v6_4762_0_1, [Score=548, Expect=0.0]} {RNA1509_18324, RNA1509_6602} {RNA1310_7142, RNA1509_18324, RNA1509_6602} {RNA1509_18324, RNA1509_6602, RNA815_3836}
5.	MligTC455_16605	1107	23.07	Mlig455_028469, Mlig455_028494	Neo: - Age: - Regeneration-upregulated BL: 1.767 Regeneration-enriched BL: 1.767	CUL2	0.953	-	-	-	-	0.953	-	Mlig455_028469 {REF} {Length: 2787} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=470.8]; Cullin protein neddylation domain [PF10557.11, score=85.4]} {Human: ENSG00000108094, CUL2, cullin 2, [RH, Score=514, Expect=2e-172]} {Mouse: ENSMUSG00000024231, Cul2, cullin 2, [RH, Score=513, Expect=4e-172]} {Dmel: FBgn0032956, Cul2, Cullin 2, [RH, Score=451, Expect=2e-148]} {Celegans: WBGene00000837, cul-2, Cullin-2, [RH, Score=413, Expect=1e-132]} {Smed: dd_Smed_v6_5180_0_1, dd_Smed_v6_5180_0_1, [RH, Score=357, Expect=8e-112]} {RNA1509_36603, RNA1509_5209} {RNA1310_6474, RNA1509_36603, RNA1509_5209} {RNA1509_36603, RNA1509_5209, RNA815_1991} Mlig455_028494 {REF} {Length: 2798} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=467.6]; Cullin protein neddylation domain [PF10557.11, score=85.3]} {Human: ENSG00000108094, CUL2, cullin 2, [RH, Score=514, Expect=2e-172]} {Mouse: ENSMUSG00000024231, Cul2, cullin 2, [RH, Score=514, Expect=2e-172]} {Dmel: FBgn0032956, Cul2, Cullin 2, [RH, Score=450, Expect=7e-148]} {Celegans: WBGene00000837, cul-2, Cullin-2, [RH, Score=415, Expect=3e-133]} {Smed: dd_Smed_v6_5180_0_1, dd_Smed_v6_5180_0_1, [RH, Score=354, Expect=9e-111]} {RNA1509_24244, RNA1509_36603} {RNA1310_6474, RNA1509_24244} {RNA1509_24244, RNA815_1991}

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