TomoSeq data search

Data search

Results for MligTC455_15856

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_15856	373	7.77	Mlig455_035342	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.512		Mlig455_035342 {REF} {Length: 4680} {RNA1509_20166} {RNA1310_13403.1} {RNA815_32695}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_15856

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.212	3.45	0.13308	0.73229
RegionR2	0.599	3.45	0.60083	0.95108
RegionR3	1.192	3.45	0.23362	0.77562
RegionR4	1.858	3.45	0.08817	0.28254
RegionR5	0.521	3.45	0.60870	0.96547
RegionR6	0.707	3.45	0.50261	1.00000
RegionR7	0.747	3.45	0.49696	1.00000
RegionR8	0.586	3.45	0.63235	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.346	3.45	1.00000	1.00000
RegenerationR2	0.128	3.45	0.87714	1.00000
RegenerationR3	-0.315	3.45	0.71637	0.95402
RegenerationR4	-0.856	3.45	0.34617	0.77681
RegenerationR5	-0.65	3.45	0.45963	0.83602
RegenerationR6	-1.517	3.45	0.11875	0.42365
RegenerationBL	-2.009	3.45	0.06466	0.29578
RegenerationTP	-0.372	3.45	0.71107	1.00000

Genes with expression patterns similar to MligTC455_15856

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15856	373	7.77	Mlig455_035342	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.512		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035342 {REF} {Length: 4680} {RNA1509_20166} {RNA1310_13403.1} {RNA815_32695}
2.	MligTC455_45674	1093	22.78	Mlig455_023097	Neo: - Age: -	TPM1	1.693	-	-	0.743	-	0.950	-	Mlig455_023097 {REF} {Length: 2197} {Pfam: Tropomyosin [PF00261.22, score=184.1]; Tropomyosin like [PF12718.9, score=105.1]; Protein of unknown function (DUF724) [PF05266.16, score=21.0]; Autophagy protein 16 (ATG16) [PF08614.13, score=19.1]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=175, Expect=8e-53]; ENSG00000167460, TPM4, tropomyosin 4, [Score=167, Expect=7e-50]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=174, Expect=6e-53]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=166, Expect=7e-50]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=167, Expect=2e-50]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=198, Expect=2e-62]} {RNA1509_15793} {RNA1310_28577.1} {RNA815_13469}
3.	MligTC455_09987	213	4.43	Mlig455_061259	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_061259 {REF} {Length: 878} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=36.3]} {RNA1509_35099} {RNA1310_42966} {RNA815_24864}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_15856

373

7.77

Mlig455_035342

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.512

1.000

Mlig455_035342 {REF} {Length: 4680} {RNA1509_20166} {RNA1310_13403.1} {RNA815_32695}

MligTC455_45674

1093

22.78

Mlig455_023097

Neo: -

Age: -

TPM1

1.693

0.743

0.950

Mlig455_023097 {REF} {Length: 2197} {Pfam: Tropomyosin [PF00261.22, score=184.1]; Tropomyosin like [PF12718.9, score=105.1]; Protein of unknown function (DUF724) [PF05266.16, score=21.0]; Autophagy protein 16 (ATG16) [PF08614.13, score=19.1]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=175, Expect=8e-53]; ENSG00000167460, TPM4, tropomyosin 4, [Score=167, Expect=7e-50]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=174, Expect=6e-53]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=166, Expect=7e-50]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=167, Expect=2e-50]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=198, Expect=2e-62]} {RNA1509_15793} {RNA1310_28577.1} {RNA815_13469}

MligTC455_09987

213

4.43

Mlig455_061259

Neo: -

Age: -

0.955

Mlig455_061259 {REF} {Length: 878} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=36.3]} {RNA1509_35099} {RNA1310_42966} {RNA815_24864}