Data search
Results for MligTC455_15975
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15975 | 647 | 13.48 | Mlig455_011149 | Neo: - Age: Up-Down-Down |
UBFD1 | Mlig455_011149 {REF} {Length: 2389} {TRANSSPLICED} {Human: ENSG00000103353, UBFD1, ubiquitin family domain containing 1, [Score=100, Expect=4e-25]} {Mouse: ENSMUSG00000030870, Ubfd1, ubiquitin family domain containing 1, [Score=100, Expect=7e-25]} {Smed: dd_Smed_v6_6237_0_1, dd_Smed_v6_6237_0_1, [Score=72.8, Expect=1e-15]} {RNA1509_14983} {RNA1310_26419.1} {RNA815_10906} |
Cumulative graph for MligTC455_15975
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.093 | 4.163 | 0.22925 | 0.87304 | |
| RegionR2 | 0.245 | 4.163 | 0.69184 | 1.00000 | |
| RegionR3 | 0.579 | 4.163 | 0.22793 | 0.76899 | |
| RegionR4 | 0.996 | 4.163 | 0.08702 | 0.28003 | |
| RegionR5 | 0.962 | 4.163 | 0.02650 | 0.11855 | |
| RegionR6 | 0.292 | 4.163 | 0.55845 | 1.00000 | |
| RegionR7 | -0.26 | 4.163 | 0.69799 | 1.00000 | |
| RegionR8 | -0.722 | 4.163 | 0.37161 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.072 | 4.163 | 0.35295 | 1.00000 | |
| RegenerationR2 | 0.06 | 4.163 | 0.90028 | 1.00000 | |
| RegenerationR3 | -0.049 | 4.163 | 0.92384 | 1.00000 | |
| RegenerationR4 | -0.35 | 4.163 | 0.51714 | 0.87838 | |
| RegenerationR5 | 0.379 | 4.163 | 0.43767 | 0.82297 | |
| RegenerationR6 | 0.167 | 4.163 | 0.75220 | 0.95340 | |
| RegenerationBL | 0.902 | 4.163 | 0.12305 | 0.41667 | |
| RegenerationTP | 0.124 | 4.163 | 0.86449 | 1.00000 |
Genes with expression patterns similar to MligTC455_15975
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15975 | 647 | 13.48 | Mlig455_011149 | Neo: - Age: Up-Down-Down |
UBFD1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011149 {REF} {Length: 2389} {TRANSSPLICED} {Human: ENSG00000103353, UBFD1, ubiquitin family domain containing 1, [Score=100, Expect=4e-25]} {Mouse: ENSMUSG00000030870, Ubfd1, ubiquitin family domain containing 1, [Score=100, Expect=7e-25]} {Smed: dd_Smed_v6_6237_0_1, dd_Smed_v6_6237_0_1, [Score=72.8, Expect=1e-15]} {RNA1509_14983} {RNA1310_26419.1} {RNA815_10906} |
| 2. | MligTC455_15976 | 652 | 13.58 | Mlig455_050860 | Neo: - Age: - |
UBFD1 | 5.994 | 1.000 | 1.000 | 1.000 | 0.999 | 0.997 | 0.998 | Mlig455_050860 {REF} {Length: 3081} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=45.7]} {Human: ENSG00000103353, UBFD1, ubiquitin family domain containing 1, [RH, Score=226, Expect=1e-72]} {Mouse: ENSMUSG00000030870, Ubfd1, ubiquitin family domain containing 1, [RH, Score=225, Expect=1e-71]} {Smed: dd_Smed_v6_6237_0_1, dd_Smed_v6_6237_0_1, [RH, Score=159, Expect=8e-48]} {RNA1509_14983} {RNA1310_26419.1, RNA1509_14983} {RNA1509_14983, RNA815_10906} |
| 3. | MligTC455_15457 | 563 | 11.73 | Mlig455_041945, Mlig455_042023 | Neo: Germline Age: - Region-specific R5: 3.301 Region-enriched R5: 2.860/0.00000 |
DAZAP1 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_041945 {REF} {Length: 4887} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=107.5]; RNA recognition motif [PF16367.7, score=33.1]} {Human: ENSG00000071626, DAZAP1, DAZ associated protein 1, [Score=80.9, Expect=2e-15]} {Mouse: ENSMUSG00000069565, Dazap1, DAZ associated protein 1, [Score=79.7, Expect=5e-15]} {Dmel: FBgn0027841, CstF64, Cleavage stimulation factor 64 kD subunit, [Score=62.8, Expect=9e-10]} {Celegans: WBGene00007396, tiar-3, TIA-1/TIAL RNA binding protein homolog, [Score=70.1, Expect=5e-12]} {Smed: dd_Smed_v6_986_0_1, dd_Smed_v6_986_0_1, [Score=67.8, Expect=9e-12]} {RNA1509_20679, RNA1509_36169} {RNA1310_2386.1, RNA1509_36169} {RNA1509_36169, RNA815_3986} Mlig455_042023 {REF} {Length: 2841} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.2]; RNA recognition motif [PF16367.7, score=36.9]} {Human: ENSG00000071626, DAZAP1, DAZ associated protein 1, [Score=75.1, Expect=7e-14]} {Mouse: ENSMUSG00000069565, Dazap1, DAZ associated protein 1, [Score=71.6, Expect=6e-13]} {Dmel: FBgn0027841, CstF64, Cleavage stimulation factor 64 kD subunit, [Score=64.3, Expect=1e-10]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [Score=75.1, Expect=5e-14]} {Smed: dd_Smed_v6_2434_0_1, dd_Smed_v6_2434_0_1, [Score=65.9, Expect=2e-11]} {RNA1509_20679} {RNA1310_2386.1} {RNA815_3986} |
| 4. | MligTC455_20788 | 562 | 11.71 | Mlig455_023481 | Neo: - Age: logFC(26M/2M)=0.284 |
UBE2J1 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_023481 {REF} {Length: 3141} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=65.4]} {Human: ENSG00000198833, UBE2J1, ubiquitin conjugating enzyme E2 J1, [RH, Score=258, Expect=3e-84]} {Mouse: ENSMUSG00000028277, Ube2j1, ubiquitin-conjugating enzyme E2J 1, [RH, Score=261, Expect=1e-85]} {Dmel: FBgn0038515, CG5823, [Score=126, Expect=8e-34]} {Celegans: WBGene00006703, ubc-6, UBiquitin Conjugating enzyme, [RH, Score=263, Expect=1e-86]} {Smed: dd_Smed_v6_2788_0_1, dd_Smed_v6_2788_0_1, [RH, Score=304, Expect=1e-101]} {RNA1509_11687} {RNA1310_24163, RNA1509_11687} {RNA1509_11687, RNA815_16666} |
| 5. | MligTC455_38394 | 603 | 12.56 | Mlig455_041091 | Neo: - |
FBXL20 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_041091 {REF} {Length: 2685} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=21.1]; Leucine Rich repeat [PF13516.8, score=21.1]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=58.9, Expect=9e-09]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=54.7, Expect=2e-07]; ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_6761_0_1, dd_Smed_v6_6761_0_1, [Score=50.4, Expect=2e-06]} {RNA1509_14146} {RNA1310_19212, RNA1509_14146} {RNA1509_14146, RNA815_7429} |
| 6. | MligTC455_24133 | 1169 | 24.36 | Mlig455_029898 | Neo: - Age: - |
BAG4 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_029898 {REF} {Length: 2903} {TRANSSPLICED} {Pfam: BAG domain [PF02179.18, score=66.0]; WW domain [PF00397.28, score=41.9]} {Human: ENSG00000156735, BAG4, BCL2 associated athanogene 4, [RH, Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000037316, Bag4, BCL2-associated athanogene 4, [RH, Score=64.3, Expect=2e-11]} {Dmel: FBgn0086708, stv, starvin, [RH, Score=68.2, Expect=7e-13]} {Celegans: WBGene00007009, wwp-1, E3 ubiquitin-protein ligase, [Score=52.0, Expect=2e-07]} {Smed: dd_Smed_v6_3939_0_1, dd_Smed_v6_3939_0_1, [Score=123, Expect=4e-34]} {RNA1509_15157, RNA1509_39211, RNA1509_52060, RNA1509_52741} {RNA1310_20817, RNA1509_15157, RNA1509_39211, RNA1509_52060, RNA1509_52741} {RNA1509_15157, RNA1509_39211, RNA1509_52060, RNA1509_52741, RNA815_20205} |
| 7. | MligTC455_25626 | 505 | 10.53 | Mlig455_015518 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 1.838/0.00000 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_015518 {REF} {Length: 4712} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=22.6]} {Mouse: ENSMUSG00000061601, Pclo, piccolo (presynaptic cytomatrix protein), [Score=62.4, Expect=3e-09]} {RNA1509_26862, RNA1509_54529, RNA1509_57094} {RNA1310_16287, RNA1509_54529, RNA1509_57094} {RNA1509_54529, RNA1509_57094, RNA815_4831.1} | |
| 8. | MligTC455_41826 | 179 | 3.72 | Mlig455_024473 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_024473 {REF} {Length: 2269} {RNA1509_48745, RNA1509_54986} {RNA1310_27046, RNA1509_48745, RNA1509_54986} {RNA1509_48745, RNA1509_54986, RNA815_24708} |
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