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Results for MligTC455_16008

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16008 104 2.18 Mlig455_017958

Neo: -

Age: -

 Mlig455_017958 {REF} {Length: 3509} {Pfam: Bovine Lentivirus VIF protein [PF07401.14, score=19.1]} {RNA1509_38857, RNA1509_7795} {RNA1310_10182.1, RNA1509_38857} {RNA1509_38857, RNA815_7013}

Cumulative graph for MligTC455_16008

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.723 2.014 0.49732 1.00000
RegionR2 1.044 2.014 0.37749 0.77222
RegionR3 -0.34 2.014 0.93717 1.00000
RegionR4 0.622 2.014 0.59077 0.90573
RegionR5 0.037 2.014 0.84400 1.00000
RegionR6 0.516 2.014 0.61196 1.00000
RegionR7 -0.299 2.014 0.93584 1.00000
RegionR8 2.143 2.014 0.09683 0.58709

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.577 2.014 0.99994 1.00000
RegenerationR2 1.205 2.014 0.05189 0.37587
RegenerationR3 1.301 2.014 0.11822 0.53567
RegenerationR4 0.579 2.014 0.49652 0.86728
RegenerationR5 0.974 2.014 0.15073 0.56888
RegenerationR6 0.86 2.014 0.28223 0.63210
RegenerationBL 0.357 2.014 0.77450 1.00000
RegenerationTP 1.141 2.014 0.28436 0.73106


Genes with expression patterns similar to MligTC455_16008

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16008 104 2.18 Mlig455_017958

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_017958 {REF} {Length: 3509} {Pfam: Bovine Lentivirus VIF protein [PF07401.14, score=19.1]} {RNA1509_38857, RNA1509_7795} {RNA1310_10182.1, RNA1509_38857} {RNA1509_38857, RNA815_7013}
2. MligTC455_25169 62 1.29 Mlig455_017959

Neo: Irradiation

Age: -

 SPECC1L 1.747 - 0.784 0.963 - - - Mlig455_017959 {REF} {Length: 4845} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=68.3]; CAMSAP CH domain [PF11971.10, score=22.3]} {Human: ENSG00000100014, SPECC1L, sperm antigen with calponin homology and coiled-coil domains 1 like, [RH, Score=264, Expect=5e-73]} {Mouse: ENSMUSG00000033444, Specc1l, sperm antigen with calponin homology and coiled-coil domains 1-like, [RH, Score=261, Expect=3e-72]} {Dmel: FBgn0025633, CG13366, [RH, Score=187, Expect=3e-48]} {Celegans: WBGene00020530, T15B12.1, [Score=128, Expect=3e-31]} {Smed: dd_Smed_v6_7845_0_1, dd_Smed_v6_7845_0_1, [Score=159, Expect=7e-40]} {RNA1509_39130, RNA1509_7795} {RNA1310_10182.1, RNA1509_39130, RNA1509_7795} {RNA1509_39130, RNA1509_7795, RNA815_11375}
3. MligTC455_50509 38 0.79 Mlig455_024809

Neo: -

Age: -

 1.738 - - 0.956 - 0.782 - Mlig455_024809 {REF} {Length: 2779} {RNA1310_44589} {RNA815_56600}
4. MligTC455_28294 127 2.64 Mlig455_006642

Neo: -

Age: Up-Down-Up

 ANKRD17 0.974 - - 0.974 - - - Mlig455_006642 {REF} {Length: 7026} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=380.4]; Ankyrin repeats (many copies) [PF13637.8, score=222.9]; Ankyrin repeat [PF13606.8, score=165.6]; Ankyrin repeats (many copies) [PF13857.8, score=142.3]; Ankyrin repeat [PF00023.32, score=136.2]; Nucleotide-Binding Domain 94 of RH [PF16830.7, score=23.4]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=139, Expect=7e-32]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=139, Expect=3e-32]} {Dmel: FBgn0039590, CG10011, [Score=90.5, Expect=1e-17]} {Celegans: WBGene00012124, T28D6.4, [Score=84.7, Expect=5e-16]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=106, Expect=9e-23]} {RNA1509_44391} {RNA1310_30754} {RNA815_10474.1}
5. MligTC455_37879 44 0.92 Mlig455_043317

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_043317 {REF} {Length: 2821} {RNA1310_10915} {RNA815_31437}
6. MligTC455_21953 256 5.34 Mlig455_008589, Mlig455_008601

Neo: -

Age: logFC(26M/2M)=-0.594

Region-enriched R7: 2.530/0.04802

 0.965 - - 0.965 - - -

Mlig455_008589 {REF} {Length: 4004} {Pfam: Major Facilitator Superfamily [PF07690.18, score=54.4]; Nodulin-like [PF06813.15, score=49.2]} {RNA1509_31992} {RNA1310_8513} {RNA815_2876.1}

Mlig455_008601 {REF} {Length: 2561} {Pfam: Major Facilitator Superfamily [PF07690.18, score=55.2]; Nodulin-like [PF06813.15, score=36.7]} {RNA1509_31992} {RNA1310_8513} {RNA815_2876.1}
7. MligTC455_38959 4417 92.01 Mlig455_020233

Neo: -

Age: -

Region-enriched R7: 2.256/0.00000
Region-enriched R2: 1.607/0.02485

Regeneration-downregulated BL: -3.320

Regeneration-depleted BL: -3.320

 C16orf89 0.962 - - 0.962 - - - Mlig455_020233 {REF} {Length: 1707} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=221.1]} {Human: ENSG00000153446, C16orf89, chromosome 16 open reading frame 89, [RH, Score=142, Expect=1e-38]} {Mouse: ENSMUSG00000051669, AU021092, expressed sequence AU021092, [RH, Score=134, Expect=8e-36]} {Dmel: FBgn0034069, CG8401, [RH, Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_21285_0_1, dd_Smed_v6_21285_0_1, [RH, Score=207, Expect=4e-64]} {RNA1509_6304, RNA1509_9939} {RNA1310_26434.1, RNA1509_6304, RNA1509_9939} {RNA1509_6304, RNA1509_9939, RNA815_24266}
8. MligTC455_50503 59 1.23 Mlig455_055158

Neo: -

Age: -

 0.962 0.962 - - - - - Mlig455_055158 {REF} {Length: 2111} {TRANSSPLICED} {Pfam: HMGL-like [PF00682.21, score=29.9]; EF-hand domain pair [PF13833.8, score=23.0]; EF hand [PF00036.34, score=19.2]} {RNA1509_52740} {RNA1310_12954.1} {RNA815_19505}
9. MligTC455_43680 71 1.48 Mlig455_013499

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.886

 0.961 - - 0.961 - - - Mlig455_013499 {REF} {Length: 4643} {Mouse: ENSMUSG00000089753, Cd300ld2, CD300 molecule like family member D2, [RH, Score=65.9, Expect=7e-11]} {Dmel: FBgn0052602, Muc12Ea, Mucin 12Ea, [Score=73.9, Expect=1e-12]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [Score=51.2, Expect=7e-06]} {RNA1509_37423} {RNA1310_12865, RNA1509_37423} {RNA1509_37423, RNA815_7819}
10. MligTC455_50502 220 4.57 Mlig455_055106

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.948

 0.956 0.956 - - - - - Mlig455_055106 {REF} {Length: 2136} {TRANSSPLICED} {Pfam: HMGL-like [PF00682.21, score=29.9]; EF-hand domain pair [PF13833.8, score=23.0]; EF hand [PF00036.34, score=19.2]} {RNA1509_52740} {RNA1310_12954.1} {RNA815_19505}
11. MligTC455_52701 111 2.31 Mlig455_038863

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_038863 {REF} {Length: 2330} {RNA1509_55277, RNA1509_55492} {RNA1310_20064, RNA1509_55277, RNA1509_55492} {RNA1509_55277, RNA1509_55492, RNA815_15327}
12. MligTC455_24579 103 2.14 Mlig455_003042, Mlig455_003334

Neo: -

Age: Up-Down-Down

 KCTD1 0.954 - - - 0.954 - -

Mlig455_003042 {REF} {Length: 2750} {RNA1509_34279} {RNA1310_18990} {RNA815_11695}

Mlig455_003334 {REF} {Length: 4230} {Pfam: Phage integrase family [PF00589.24, score=19.9]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=65.9, Expect=2e-10]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=65.1, Expect=2e-10]} {RNA1310_18990} {RNA815_11695}
13. MligTC455_25416 74 1.53 Mlig455_023019, Mlig455_023116

Neo: -

Age: -

 KCNK18 0.954 0.954 - - - - -

Mlig455_023019 {REF} {Length: 2752} {Pfam: Ion channel [PF07885.18, score=122.1]; Sodium ion transport-associated [PF06512.15, score=20.3]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=106, Expect=8e-25]} {Dmel: FBgn0033257, sand, sandman, [Score=147, Expect=1e-39]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=157, Expect=1e-43]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=323, Expect=4e-107]} {RNA1509_41017} {RNA1310_13859.1} {RNA815_18063}

Mlig455_023116 {REF} {Length: 3009} {Pfam: Ion channel [PF07885.18, score=122.1]; Sodium ion transport-associated [PF06512.15, score=19.2]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=100, Expect=2e-22]; ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=95.1, Expect=2e-20]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=106, Expect=1e-24]} {Dmel: FBgn0033257, sand, sandman, [Score=149, Expect=3e-40]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=159, Expect=4e-44]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=325, Expect=1e-107]} {RNA1509_41017} {RNA1310_13859.1, RNA1509_41017} {RNA1509_41017, RNA815_18063}

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