TomoSeq data search

Data search

Results for MligTC455_16057

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16057	407	8.48	Mlig455_041303	Neo: - Age: -	GDAP2	Mlig455_041303 {REF} {Length: 3202} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=66.9]; Divergent CRAL/TRIO domain [PF13716.8, score=41.1]} {Human: ENSG00000196505, GDAP2, ganglioside induced differentiation associated protein 2, [RH, Score=309, Expect=2e-98]} {Mouse: ENSMUSG00000027865, Gdap2, ganglioside-induced differentiation-associated-protein 2, [RH, Score=305, Expect=2e-96]} {Dmel: FBgn0042135, CG18812, [RH, Score=243, Expect=3e-73]} {Smed: dd_Smed_v6_8031_0_1, dd_Smed_v6_8031_0_1, [RH, Score=136, Expect=3e-34]} {RNA1509_36908, RNA1509_9205} {RNA1310_9273.1, RNA1509_36908, RNA1509_9205} {RNA1509_36908, RNA1509_9205, RNA815_3097}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16057

407

8.48

Mlig455_041303

Neo: -

Age: -

GDAP2

Mlig455_041303 {REF} {Length: 3202} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=66.9]; Divergent CRAL/TRIO domain [PF13716.8, score=41.1]} {Human: ENSG00000196505, GDAP2, ganglioside induced differentiation associated protein 2, [RH, Score=309, Expect=2e-98]} {Mouse: ENSMUSG00000027865, Gdap2, ganglioside-induced differentiation-associated-protein 2, [RH, Score=305, Expect=2e-96]} {Dmel: FBgn0042135, CG18812, [RH, Score=243, Expect=3e-73]} {Smed: dd_Smed_v6_8031_0_1, dd_Smed_v6_8031_0_1, [RH, Score=136, Expect=3e-34]} {RNA1509_36908, RNA1509_9205} {RNA1310_9273.1, RNA1509_36908, RNA1509_9205} {RNA1509_36908, RNA1509_9205, RNA815_3097}

Cumulative graph for MligTC455_16057

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.556	3.565	0.66947	1.00000
RegionR2	0.468	3.565	0.33893	0.73060
RegionR3	0.726	3.565	0.03035	0.29994
RegionR4	0.306	3.565	0.50580	0.83231
RegionR5	0.101	3.565	0.75217	1.00000
RegionR6	-0.001	3.565	0.99608	1.00000
RegionR7	-0.803	3.565	0.14869	0.71753
RegionR8	-0.239	3.565	0.68580	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.013	3.565	0.35208	1.00000
RegenerationR2	-0.43	3.565	0.27691	0.72106
RegenerationR3	-0.556	3.565	0.18122	0.61774
RegenerationR4	0.258	3.565	0.56832	0.90052
RegenerationR5	0.296	3.565	0.41745	0.81013
RegenerationR6	0.386	3.565	0.39950	0.73683
RegenerationBL	-0.542	3.565	0.50088	0.86527
RegenerationTP	0.393	3.565	0.53937	0.92564

Genes with expression patterns similar to MligTC455_16057

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16057	407	8.48	Mlig455_041303	Neo: - Age: -	GDAP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041303 {REF} {Length: 3202} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=66.9]; Divergent CRAL/TRIO domain [PF13716.8, score=41.1]} {Human: ENSG00000196505, GDAP2, ganglioside induced differentiation associated protein 2, [RH, Score=309, Expect=2e-98]} {Mouse: ENSMUSG00000027865, Gdap2, ganglioside-induced differentiation-associated-protein 2, [RH, Score=305, Expect=2e-96]} {Dmel: FBgn0042135, CG18812, [RH, Score=243, Expect=3e-73]} {Smed: dd_Smed_v6_8031_0_1, dd_Smed_v6_8031_0_1, [RH, Score=136, Expect=3e-34]} {RNA1509_36908, RNA1509_9205} {RNA1310_9273.1, RNA1509_36908, RNA1509_9205} {RNA1509_36908, RNA1509_9205, RNA815_3097}
2.	MligTC455_43711	371	7.73	Mlig455_012252, Mlig455_052519	Neo: - Age: -	MTMR4	0.953	-	0.953	-	-	-	-	Mlig455_012252 {REF} {Length: 551} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=68.5]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=67.4, Expect=6e-13]; ENSG00000063601, MTMR1, myotubularin related protein 1, [Score=66.6, Expect=1e-12]} {Mouse: ENSMUSG00000034354, Mtmr3, myotubularin related protein 3, [Score=67.8, Expect=3e-13]} {Dmel: FBgn0030735, CG3632, [Score=60.5, Expect=8e-11]} {Celegans: WBGene00003476, mtm-3, Myotubularin-related protein 3, [Score=77.8, Expect=8e-17]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=81.6, Expect=2e-18]} {RNA1509_52965} {RNA1310_5330} {RNA815_31321} Mlig455_052519 {REF} {Length: 3504} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=340.9]; Uncharacterized protein family UPF0029 [PF01205.21, score=112.2]; RWD domain [PF05773.24, score=69.6]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=234, Expect=9e-63]} {Mouse: ENSMUSG00000018401, Mtmr4, myotubularin related protein 4, [Score=234, Expect=8e-63]} {Dmel: FBgn0030735, CG3632, [Score=181, Expect=5e-46]} {Celegans: WBGene00013122, impt-1, Protein IMPACT homolog, [RH, Score=153, Expect=2e-41]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=196, Expect=1e-51]} {RNA1509_13518} {RNA1310_5330} {RNA815_14443}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16057

407

8.48

Mlig455_041303

Neo: -

Age: -

GDAP2

1.000

MligTC455_43711

371

7.73

Mlig455_012252, Mlig455_052519

Neo: -

Age: -

MTMR4

0.953

Mlig455_012252 {REF} {Length: 551} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=68.5]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=67.4, Expect=6e-13]; ENSG00000063601, MTMR1, myotubularin related protein 1, [Score=66.6, Expect=1e-12]} {Mouse: ENSMUSG00000034354, Mtmr3, myotubularin related protein 3, [Score=67.8, Expect=3e-13]} {Dmel: FBgn0030735, CG3632, [Score=60.5, Expect=8e-11]} {Celegans: WBGene00003476, mtm-3, Myotubularin-related protein 3, [Score=77.8, Expect=8e-17]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=81.6, Expect=2e-18]} {RNA1509_52965} {RNA1310_5330} {RNA815_31321}

Mlig455_052519 {REF} {Length: 3504} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=340.9]; Uncharacterized protein family UPF0029 [PF01205.21, score=112.2]; RWD domain [PF05773.24, score=69.6]} {Human: ENSG00000108389, MTMR4, myotubularin related protein 4, [Score=234, Expect=9e-63]} {Mouse: ENSMUSG00000018401, Mtmr4, myotubularin related protein 4, [Score=234, Expect=8e-63]} {Dmel: FBgn0030735, CG3632, [Score=181, Expect=5e-46]} {Celegans: WBGene00013122, impt-1, Protein IMPACT homolog, [RH, Score=153, Expect=2e-41]} {Smed: dd_Smed_v6_9000_0_1, dd_Smed_v6_9000_0_1, [Score=196, Expect=1e-51]} {RNA1509_13518} {RNA1310_5330} {RNA815_14443}