TomoSeq data search

Data search

Results for MligTC455_16072

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16072	1719	35.81	Mlig455_017386, Mlig455_017464, Mlig455_030930	Neo: Int S/G2/M Age: - Region-enriched R4: 2.587/0.00006		Mlig455_017386 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737} {RNA815_11203.1} Mlig455_017464 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737} {RNA815_11203.1} Mlig455_030930 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737, RNA1509_40967} {RNA1509_40967, RNA815_11203.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_16072

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.478	5.43	0.05159	0.53405
RegionR2	-0.046	5.43	0.94092	1.00000
RegionR3	-0.148	5.43	0.76839	1.00000
RegionR4	2.587	5.43	0.00000	0.00006
RegionR5	-0.029	5.43	0.95619	1.00000
RegionR6	-0.401	5.43	0.43336	0.99563
RegionR7	0.313	5.43	0.54401	1.00000
RegionR8	0.201	5.43	0.72676	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.126	5.43	0.15520	0.89749
RegenerationR2	0.213	5.43	0.69400	0.95425
RegenerationR3	0.247	5.43	0.68035	0.94051
RegenerationR4	-0.772	5.43	0.19633	0.64131
RegenerationR5	0.378	5.43	0.50574	0.86154
RegenerationR6	0.719	5.43	0.21180	0.55536
RegenerationBL	-0.554	5.43	0.31964	0.68688
RegenerationTP	0.648	5.43	0.26207	0.70972

Genes with expression patterns similar to MligTC455_16072

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16072	1719	35.81	Mlig455_017386, Mlig455_017464, Mlig455_030930	Neo: Int S/G2/M Age: - Region-enriched R4: 2.587/0.00006		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017386 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737} {RNA815_11203.1} Mlig455_017464 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737} {RNA815_11203.1} Mlig455_030930 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737, RNA1509_40967} {RNA1509_40967, RNA815_11203.1}
2.	MligTC455_15979	836	17.42	Mlig455_061389	Neo: - Age: -	DTX3	0.955	-	-	-	0.955	-	-	Mlig455_061389 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: Deltex C-terminal domain [PF18102.3, score=160.2]} {Human: ENSG00000178498, DTX3, deltex E3 ubiquitin ligase 3, [RH, Score=170, Expect=7e-47]} {Mouse: ENSMUSG00000040415, Dtx3, deltex 3, E3 ubiquitin ligase, [RH, Score=171, Expect=2e-47]} {Dmel: FBgn0000524, dx, deltex, [RH, Score=112, Expect=2e-25]} {RNA1509_9227} {RNA1310_170} {RNA815_1571}
3.	MligTC455_37020	1054	21.96	Mlig455_043497	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.666 Region-enriched R5: 1.199/0.01021	CYP2J2	0.95	-	-	-	0.950	-	-	Mlig455_043497 {REF} {Length: 2183} {Pfam: Cytochrome P450 [PF00067.24, score=322.9]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=244, Expect=4e-74]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=236, Expect=4e-71]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=236, Expect=5e-71]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=236, Expect=7e-71]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=232, Expect=1e-69]} {Mouse: ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [RH, Score=251, Expect=2e-77]; ENSMUSG00000096852, Cyp2d12, cytochrome P450, family 2, subfamily d, polypeptide 12, [RH, Score=245, Expect=9e-75]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [RH, Score=242, Expect=1e-73]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [RH, Score=254, Expect=5e-78]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=225, Expect=2e-67]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [RH, Score=280, Expect=2e-88]} {RNA1509_48428} {RNA1310_15448, RNA1509_48428} {RNA1509_48428, RNA815_13331}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16072

1719

35.81

Mlig455_017386, Mlig455_017464, Mlig455_030930

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.587/0.00006

1.000

Mlig455_017386 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737} {RNA815_11203.1}

Mlig455_017464 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737} {RNA815_11203.1}

Mlig455_030930 {REF} {Length: 1248} {TRANSSPLICED} {RNA1509_40967} {RNA1310_30737, RNA1509_40967} {RNA1509_40967, RNA815_11203.1}

MligTC455_15979

836

17.42

Mlig455_061389

Neo: -

Age: -

DTX3

0.955

Mlig455_061389 {REF} {Length: 2049} {TRANSSPLICED} {Pfam: Deltex C-terminal domain [PF18102.3, score=160.2]} {Human: ENSG00000178498, DTX3, deltex E3 ubiquitin ligase 3, [RH, Score=170, Expect=7e-47]} {Mouse: ENSMUSG00000040415, Dtx3, deltex 3, E3 ubiquitin ligase, [RH, Score=171, Expect=2e-47]} {Dmel: FBgn0000524, dx, deltex, [RH, Score=112, Expect=2e-25]} {RNA1509_9227} {RNA1310_170} {RNA815_1571}

MligTC455_37020

1054

21.96

Mlig455_043497

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.666

Region-enriched R5: 1.199/0.01021

CYP2J2

0.95

0.950

Mlig455_043497 {REF} {Length: 2183} {Pfam: Cytochrome P450 [PF00067.24, score=322.9]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=244, Expect=4e-74]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=236, Expect=4e-71]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=236, Expect=5e-71]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=236, Expect=7e-71]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=232, Expect=1e-69]} {Mouse: ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [RH, Score=251, Expect=2e-77]; ENSMUSG00000096852, Cyp2d12, cytochrome P450, family 2, subfamily d, polypeptide 12, [RH, Score=245, Expect=9e-75]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [RH, Score=242, Expect=1e-73]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [RH, Score=254, Expect=5e-78]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=225, Expect=2e-67]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [RH, Score=280, Expect=2e-88]} {RNA1509_48428} {RNA1310_15448, RNA1509_48428} {RNA1509_48428, RNA815_13331}