TomoSeq data search

Data search

Results for MligTC455_16109

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16109	902	18.80	Mlig455_008653, Mlig455_069419	Neo: - Age: Down-Up-Down	BTRC	Mlig455_008653 {REF} {Length: 3750} {Pfam: WD domain, G-beta repeat [PF00400.34, score=122.0]; D domain of beta-TrCP [PF12125.10, score=64.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.4]; F-box-like [PF12937.9, score=29.9]; Nucleoporin Nup120/160 [PF11715.10, score=27.7]; WD40-like domain [PF17005.7, score=25.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=701, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=691, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=699, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=692, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_2, dd_Smed_v6_3757_0_2, [RH, Score=620, Expect=0.0]} {RNA1509_19554, RNA1509_23048} {RNA1310_11488.1, RNA1509_19554, RNA1509_23048} {RNA1509_19554, RNA1509_23048, RNA815_4595} Mlig455_069419 {REF} {Length: 4214} {Pfam: WD domain, G-beta repeat [PF00400.34, score=122.0]; D domain of beta-TrCP [PF12125.10, score=64.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.4]; F-box-like [PF12937.9, score=29.9]; Nucleoporin Nup120/160 [PF11715.10, score=27.7]; WD40-like domain [PF17005.7, score=25.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=701, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=690, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=699, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=691, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=604, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_2, dd_Smed_v6_3757_0_2, [RH, Score=619, Expect=0.0]} {RNA1509_23048} {RNA1310_11488.1} {RNA815_4595}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16109

902

18.80

Mlig455_008653, Mlig455_069419

Neo: -

Age: Down-Up-Down

BTRC

Mlig455_008653 {REF} {Length: 3750} {Pfam: WD domain, G-beta repeat [PF00400.34, score=122.0]; D domain of beta-TrCP [PF12125.10, score=64.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.4]; F-box-like [PF12937.9, score=29.9]; Nucleoporin Nup120/160 [PF11715.10, score=27.7]; WD40-like domain [PF17005.7, score=25.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=701, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=691, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=699, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=692, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_2, dd_Smed_v6_3757_0_2, [RH, Score=620, Expect=0.0]} {RNA1509_19554, RNA1509_23048} {RNA1310_11488.1, RNA1509_19554, RNA1509_23048} {RNA1509_19554, RNA1509_23048, RNA815_4595}

Mlig455_069419 {REF} {Length: 4214} {Pfam: WD domain, G-beta repeat [PF00400.34, score=122.0]; D domain of beta-TrCP [PF12125.10, score=64.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.4]; F-box-like [PF12937.9, score=29.9]; Nucleoporin Nup120/160 [PF11715.10, score=27.7]; WD40-like domain [PF17005.7, score=25.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=701, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=690, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=699, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=691, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=604, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_2, dd_Smed_v6_3757_0_2, [RH, Score=619, Expect=0.0]} {RNA1509_23048} {RNA1310_11488.1} {RNA815_4595}

Cumulative graph for MligTC455_16109

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.007	4.501	0.99406	1.00000
RegionR2	0.669	4.501	0.20684	0.56949
RegionR3	-0.386	4.501	0.38083	0.91269
RegionR4	-0.477	4.501	0.34123	0.66141
RegionR5	-0.501	4.501	0.22559	0.52989
RegionR6	-0.017	4.501	0.96894	1.00000
RegionR7	0.293	4.501	0.53990	1.00000
RegionR8	0.412	4.501	0.46959	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.409	4.501	0.05296	0.70520
RegenerationR2	0.189	4.501	0.69832	0.95576
RegenerationR3	0.19	4.501	0.73028	0.95782
RegenerationR4	-0.553	4.501	0.31612	0.75546
RegenerationR5	-0.019	4.501	0.97119	1.00000
RegenerationR6	-0.363	4.501	0.50450	0.80947
RegenerationBL	0.308	4.501	0.56867	0.92250
RegenerationTP	-0.001	4.501	0.99909	1.00000

Genes with expression patterns similar to MligTC455_16109

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16109	902	18.8	Mlig455_008653, Mlig455_069419	Neo: - Age: Down-Up-Down	BTRC	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008653 {REF} {Length: 3750} {Pfam: WD domain, G-beta repeat [PF00400.34, score=122.0]; D domain of beta-TrCP [PF12125.10, score=64.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.4]; F-box-like [PF12937.9, score=29.9]; Nucleoporin Nup120/160 [PF11715.10, score=27.7]; WD40-like domain [PF17005.7, score=25.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=701, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=691, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=699, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=692, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_2, dd_Smed_v6_3757_0_2, [RH, Score=620, Expect=0.0]} {RNA1509_19554, RNA1509_23048} {RNA1310_11488.1, RNA1509_19554, RNA1509_23048} {RNA1509_19554, RNA1509_23048, RNA815_4595} Mlig455_069419 {REF} {Length: 4214} {Pfam: WD domain, G-beta repeat [PF00400.34, score=122.0]; D domain of beta-TrCP [PF12125.10, score=64.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.4]; F-box-like [PF12937.9, score=29.9]; Nucleoporin Nup120/160 [PF11715.10, score=27.7]; WD40-like domain [PF17005.7, score=25.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=701, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=690, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=699, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=691, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=604, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_2, dd_Smed_v6_3757_0_2, [RH, Score=619, Expect=0.0]} {RNA1509_23048} {RNA1310_11488.1} {RNA815_4595}
2.	MligTC455_39124	660	13.75	Mlig455_054446	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.887	MAP3K19	0.965	-	-	-	-	-	0.965	Mlig455_054446 {REF} {Length: 5015} {Pfam: Protein kinase domain [PF00069.27, score=191.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=128.5]; Ankyrin repeats (3 copies) [PF12796.9, score=65.5]; Ankyrin repeats (many copies) [PF13637.8, score=63.6]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeat [PF00023.32, score=52.4]; Ankyrin repeat [PF13606.8, score=49.3]; Phosphotransferase enzyme family [PF01636.25, score=31.3]; Fungal protein kinase [PF17667.3, score=28.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=251, Expect=1e-67]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=253, Expect=2e-68]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=146, Expect=7e-36]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=158, Expect=2e-41]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=226, Expect=3e-61]} {RNA1509_40012, RNA1509_8258} {RNA1310_1436.1, RNA1509_40012} {RNA1509_40012, RNA815_1740}
3.	MligTC455_44337	541	11.27	Mlig455_064876	Neo: - Age: Up-Down-Up Region-enriched R6: 2.501/0.00205 Region-enriched R5: 2.289/0.00060		0.953	-	-	-	0.953	-	-	Mlig455_064876 {REF} {Length: 2587} {RNA1509_25494} {RNA1310_37845} {RNA815_17626}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16109

902

18.8

Mlig455_008653, Mlig455_069419

Neo: -

Age: Down-Up-Down

BTRC

1.000

MligTC455_39124

660

13.75

Mlig455_054446

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.887

MAP3K19

0.965

Mlig455_054446 {REF} {Length: 5015} {Pfam: Protein kinase domain [PF00069.27, score=191.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=128.5]; Ankyrin repeats (3 copies) [PF12796.9, score=65.5]; Ankyrin repeats (many copies) [PF13637.8, score=63.6]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeat [PF00023.32, score=52.4]; Ankyrin repeat [PF13606.8, score=49.3]; Phosphotransferase enzyme family [PF01636.25, score=31.3]; Fungal protein kinase [PF17667.3, score=28.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=22.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=251, Expect=1e-67]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=253, Expect=2e-68]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=146, Expect=7e-36]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=158, Expect=2e-41]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=226, Expect=3e-61]} {RNA1509_40012, RNA1509_8258} {RNA1310_1436.1, RNA1509_40012} {RNA1509_40012, RNA815_1740}

MligTC455_44337

541

11.27

Mlig455_064876

Neo: -

Age: Up-Down-Up

Region-enriched R6: 2.501/0.00205
Region-enriched R5: 2.289/0.00060

0.953

Mlig455_064876 {REF} {Length: 2587} {RNA1509_25494} {RNA1310_37845} {RNA815_17626}