TomoSeq data search

Data search

Results for MligTC455_16195

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16195	25	0.51	Mlig455_055812	Neo: - Age: -	MEOX1	Mlig455_055812 {REF} {Length: 808} {Pfam: Homeodomain [PF00046.31, score=78.4]} {Human: ENSG00000005102, MEOX1, mesenchyme homeobox 1, [RH, Score=104, Expect=4e-27]; ENSG00000106511, MEOX2, mesenchyme homeobox 2, [RH, Score=103, Expect=2e-26]} {Mouse: ENSMUSG00000001493, Meox1, mesenchyme homeobox 1, [RH, Score=103, Expect=4e-27]; ENSMUSG00000036144, Meox2, mesenchyme homeobox 2, [RH, Score=103, Expect=2e-26]} {Dmel: FBgn0014949, btn, buttonless, [RH, Score=98.2, Expect=6e-26]} {Celegans: WBGene00000436, ceh-12, Homeobox protein ceh-12, [Score=79.0, Expect=2e-18]} {Smed: dd_Smed_v6_12317_0_1, dd_Smed_v6_12317_0_1, [RH, Score=99.0, Expect=7e-25]} {RNA1310_43427.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16195

0.51

Mlig455_055812

Neo: -

Age: -

MEOX1

Mlig455_055812 {REF} {Length: 808} {Pfam: Homeodomain [PF00046.31, score=78.4]} {Human: ENSG00000005102, MEOX1, mesenchyme homeobox 1, [RH, Score=104, Expect=4e-27]; ENSG00000106511, MEOX2, mesenchyme homeobox 2, [RH, Score=103, Expect=2e-26]} {Mouse: ENSMUSG00000001493, Meox1, mesenchyme homeobox 1, [RH, Score=103, Expect=4e-27]; ENSMUSG00000036144, Meox2, mesenchyme homeobox 2, [RH, Score=103, Expect=2e-26]} {Dmel: FBgn0014949, btn, buttonless, [RH, Score=98.2, Expect=6e-26]} {Celegans: WBGene00000436, ceh-12, Homeobox protein ceh-12, [Score=79.0, Expect=2e-18]} {Smed: dd_Smed_v6_12317_0_1, dd_Smed_v6_12317_0_1, [RH, Score=99.0, Expect=7e-25]} {RNA1310_43427.1}

Cumulative graph for MligTC455_16195

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.435	0.912	1.00000	1.00000
RegionR2	1.326	0.912	0.47634	0.86140
RegionR3	2.986	0.912	0.01901	0.22974
RegionR4	1.163	0.912	0.40781	0.73483
RegionR5	2.107	0.912	0.11322	0.33222
RegionR6	1.897	0.912	0.23973	0.82437
RegionR7	-2.763	0.912	1.00000	1.00000
RegionR8	-3.281	0.912	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.213	0.912	1.00000	1.00000
RegenerationR2	-1.417	0.912	0.23880	0.68654
RegenerationR3	-1.456	0.912	0.22487	0.66018
RegenerationR4	0.488	0.912	0.88125	1.00000
RegenerationR5	1.247	0.912	0.34157	0.75868
RegenerationR6	-2.955	0.912	0.08864	0.37142
RegenerationBL	2.13	0.912	0.35977	0.72875
RegenerationTP	3.389	0.912	0.25577	0.70301

Genes with expression patterns similar to MligTC455_16195

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16195	25	0.51	Mlig455_055812	Neo: - Age: -	MEOX1	3	1.000	-	-	1.000	-	1.000	Mlig455_055812 {REF} {Length: 808} {Pfam: Homeodomain [PF00046.31, score=78.4]} {Human: ENSG00000005102, MEOX1, mesenchyme homeobox 1, [RH, Score=104, Expect=4e-27]; ENSG00000106511, MEOX2, mesenchyme homeobox 2, [RH, Score=103, Expect=2e-26]} {Mouse: ENSMUSG00000001493, Meox1, mesenchyme homeobox 1, [RH, Score=103, Expect=4e-27]; ENSMUSG00000036144, Meox2, mesenchyme homeobox 2, [RH, Score=103, Expect=2e-26]} {Dmel: FBgn0014949, btn, buttonless, [RH, Score=98.2, Expect=6e-26]} {Celegans: WBGene00000436, ceh-12, Homeobox protein ceh-12, [Score=79.0, Expect=2e-18]} {Smed: dd_Smed_v6_12317_0_1, dd_Smed_v6_12317_0_1, [RH, Score=99.0, Expect=7e-25]} {RNA1310_43427.1}
2.	MligTC455_41995	104	2.17	Mlig455_021586	Neo: Int S/G2/M Age: -	DNAJC5	0.956	-	-	-	0.956	-	-	Mlig455_021586 {REF} {Length: 3123} {Pfam: DnaJ domain [PF00226.33, score=92.6]} {Human: ENSG00000101152, DNAJC5, DnaJ heat shock protein family (Hsp40) member C5, [Score=150, Expect=2e-44]; ENSG00000147570, DNAJC5B, DnaJ heat shock protein family (Hsp40) member C5 beta, [Score=143, Expect=2e-41]} {Mouse: ENSMUSG00000000826, Dnajc5, DnaJ heat shock protein family (Hsp40) member C5, [Score=150, Expect=8e-45]; ENSMUSG00000027606, Dnajc5b, DnaJ heat shock protein family (Hsp40) member C5 beta, [Score=147, Expect=2e-43]} {Dmel: FBgn0004179, Csp, Cysteine string protein, [Score=169, Expect=1e-51]} {Celegans: WBGene00001032, dnj-14, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=130, Expect=9e-37]} {Smed: dd_Smed_v6_5990_0_1, dd_Smed_v6_5990_0_1, [Score=144, Expect=2e-42]} {RNA1509_16006} {RNA1310_27354.1} {RNA815_17167}
3.	MligTC455_43873	861	17.94	Mlig455_006939	Neo: Irradiation Age: - Region-enriched R5: 3.807/0.00000		0.956	-	-	-	0.956	-	-	Mlig455_006939 {REF} {Length: 1363} {RNA1509_10916, RNA1509_4367, RNA1509_52262} {RNA1310_31891, RNA1509_10916, RNA1509_4367, RNA1509_52262} {RNA1509_10916, RNA1509_4367, RNA1509_52262, RNA815_15503}
4.	MligTC455_45548	49	1.03	Mlig455_041893	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_041893 {REF} {Length: 410} {NoTransDecoderORF} {RNA1509_51798} {RNA1310_40056} {RNA815_24383.1}