M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_16224

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16224 1342 27.96 Mlig455_005385

Neo: -

Age: -

 Mlig455_005385 {REF} {Length: 955} {RNA1509_11238} {RNA1310_16270, RNA1509_11238}

Cumulative graph for MligTC455_16224

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.56 5.033 0.12767 0.72428
RegionR2 1.011 5.033 0.43759 0.82692
RegionR3 0.271 5.033 0.79048 1.00000
RegionR4 2.756 5.033 0.02377 0.11521
RegionR5 2.051 5.033 0.07025 0.23879
RegionR6 -0.907 5.033 0.98646 1.00000
RegionR7 0.261 5.033 0.78373 1.00000
RegionR8 1.116 5.033 0.52168 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.815 5.033 0.15240 0.89519
RegenerationR2 2.705 5.033 0.00848 0.14709
RegenerationR3 2.737 5.033 0.00914 0.17470
RegenerationR4 1.319 5.033 0.21327 0.66037
RegenerationR5 1.902 5.033 0.08849 0.45813
RegenerationR6 4.224 5.033 0.00141 0.04173
RegenerationBL 2.531 5.033 0.01256 0.11494
RegenerationTP 3.033 5.033 0.00718 0.14265


Genes with expression patterns similar to MligTC455_16224

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16224 1342 27.96 Mlig455_005385

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_005385 {REF} {Length: 955} {RNA1509_11238} {RNA1310_16270, RNA1509_11238}
2. MligTC455_28321 81 1.69 Mlig455_060693

Neo: -

Age: -

 3.54 - - 0.824 0.868 0.983 0.865 Mlig455_060693 {REF} {Length: 1631} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=46.4]; Recombination endonuclease VII [PF02945.17, score=22.6]} {Celegans: WBGene00022511, ZC53.4, [Score=177, Expect=4e-47]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=218, Expect=6e-63]} {RNA1509_8360} {RNA1310_576.1} {RNA815_1671.1}
3. MligTC455_37038 373 7.77 Mlig455_008501, Mlig455_017051, Mlig455_037981, Mlig455_052966, Mlig455_056998, Mlig455_057057, Mlig455_057072

Neo: -

Age: -

Region-enriched R4: 4.441/0.01238

 3.399 - - 0.714 0.870 0.953 0.862

Mlig455_008501 {REF} {Length: 1509} {NoTransDecoderORF} {RNA1509_56148} {RNA1310_52327} {RNA815_48299}

Mlig455_017051 {REF} {Length: 1884} {NoTransDecoderORF} {RNA1509_53350} {RNA1310_45417} {RNA815_48299}

Mlig455_037981 {REF} {Length: 160} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_82877.3} {RNA815_48299}

Mlig455_052966 {REF} {Length: 890} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_45417} {RNA815_48299}

Mlig455_056998 {REF} {Length: 919} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_45417} {RNA815_48299}

Mlig455_057057 {REF} {Length: 530} {RNA1509_53350} {RNA1310_82877.2} {RNA815_48299}

Mlig455_057072 {REF} {Length: 945} {RNA1509_53350} {RNA1310_45417} {RNA815_48299}
4. MligTC455_13653 607 12.65 Mlig455_005401, Mlig455_005409

Neo: -

Age: -

Region-enriched R4: 4.246/0.02777

 3.237 - - 0.792 0.955 0.789 0.701

Mlig455_005401 {REF} {Length: 648} {NoTransDecoderORF} {RNA1509_12443} {RNA1310_14828.1} {RNA815_80.1}

Mlig455_005409 {REF} {Length: 294} {NoTransDecoderORF} {RNA1509_12443} {RNA1310_14828.1}
5. MligTC455_31866 621 12.93 Mlig455_023217, Mlig455_045753

Neo: -

Age: logFC(26M/2M)=0.454

Region-enriched R4: 4.034/0.04838

Regeneration-upregulated BL: 5.711

Regeneration-enriched BL: 5.711

 2.645 - - 0.934 0.737 0.974 -

Mlig455_023217 {REF} {Length: 4980} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=31.5]} {RNA1509_12420} {RNA1310_5450.1} {RNA815_7136.1}

Mlig455_045753 {REF} {Length: 5962} {Pfam: Lectin C-type domain [PF00059.23, score=30.9]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=58.5, Expect=3e-10]} {RNA1509_22651, RNA1509_44006} {RNA1310_622.1, RNA1509_44006} {RNA1509_44006, RNA815_2514.1}
6. MligTC455_27834 437 9.11 Mlig455_003625, Mlig455_044671

Neo: -

Age: logFC(26M/2M)=1.954

 2.633 - - - 0.902 0.984 0.747

Mlig455_003625 {REF} {Length: 8904} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=51.2]; DDE superfamily endonuclease [PF13358.8, score=21.8]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=205, Expect=2e-60]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}

Mlig455_044671 {REF} {Length: 10362} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}
7. MligTC455_31863 390 8.13 Mlig455_007159

Neo: -

Age: Up-Down-Up

Regeneration-upregulated BL: 5.272

Regeneration-enriched BL: 5.272

 PPP2R3C 2.6 - - 0.782 0.850 0.968 - Mlig455_007159 {REF} {Length: 7241} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=29.1]; EF-hand domain pair [PF13499.8, score=28.1]; EF hand [PF00036.34, score=19.1]} {Human: ENSG00000092020, PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma, [Score=416, Expect=4e-142]} {Mouse: ENSMUSG00000021022, Ppp2r3c, protein phosphatase 2, regulatory subunit B'', gamma, [Score=418, Expect=3e-143]} {Dmel: FBgn0038744, CG4733, [Score=98.2, Expect=2e-21]} {Smed: dd_Smed_v6_10614_0_1, dd_Smed_v6_10614_0_1, [Score=397, Expect=8e-136]} {RNA1509_34380} {RNA1310_18272} {RNA815_7249}
8. MligTC455_27995 229 4.77 Mlig455_000174, Mlig455_015369

Neo: -

Age: -

 2.564 - - 0.797 - 0.959 0.808

Mlig455_000174 {REF} {Length: 4732} {Celegans: WBGene00016348, C33E10.6, [Score=152, Expect=2e-41]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=137, Expect=7e-37]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}

Mlig455_015369 {REF} {Length: 3981} {Celegans: WBGene00016348, C33E10.6, [Score=149, Expect=2e-40]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=135, Expect=4e-36]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}
9. MligTC455_28268 432 9 Mlig455_008983, Mlig455_023368

Neo: -

Age: -

 2.559 - - 0.732 - 0.967 0.860

Mlig455_008983 {REF} {Length: 2598} {Celegans: WBGene00016348, C33E10.6, [Score=206, Expect=5e-58]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=218, Expect=4e-65]} {RNA1509_37388, RNA1509_8360} {RNA1310_15837, RNA1509_37388} {RNA1509_37388, RNA815_1671.1}

Mlig455_023368 {REF} {Length: 7556} {Celegans: WBGene00016348, C33E10.6, [Score=206, Expect=5e-58]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=218, Expect=4e-65]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}
10. MligTC455_38676 673 14.03 Mlig455_011364, Mlig455_016341, Mlig455_027534, Mlig455_036771, Mlig455_053663

Neo: -

Age: -

 ZNF570 2.548 - - 0.720 - 0.953 0.875

Mlig455_011364 {REF} {Length: 832} {Celegans: WBGene00019192, H12I13.3, [Score=53.9, Expect=6e-09]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=54.7, Expect=3e-09]} {RNA1509_8360} {RNA1310_8325.1} {RNA815_1671.1}

Mlig455_016341 {REF} {Length: 11905} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=229.4]; Zinc finger, C2H2 type [PF00096.28, score=139.8]; C2H2-type zinc finger [PF13894.8, score=104.8]; C2H2-type zinc finger [PF13912.8, score=65.0]; Zinc-finger of C2H2 type [PF12874.9, score=48.2]; zinc-finger C2H2-type [PF16622.7, score=37.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=36.8]; KIAA1045 RING finger [PF16744.7, score=34.8]; Family of unknown function (DUF5810) [PF19126.2, score=30.1]; zinc-ribbon family [PF17032.7, score=27.9]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=27.7]; AN1-like Zinc finger [PF01428.18, score=24.8]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=23.7]; C2H2-type zinc ribbon [PF15909.7, score=23.2]; BolA-like protein [PF01722.20, score=21.0]; Zinc ribbon domain [PF09723.12, score=20.8]; GAGA factor [PF09237.13, score=20.5]; Hydrogenase/urease nickel incorporation, metallochaperone, hypA [PF01155.21, score=20.2]} {Human: ENSG00000171827, ZNF570, zinc finger protein 570, [Score=274, Expect=4e-88]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=272, Expect=1e-88]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=270, Expect=1e-86]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=269, Expect=8e-84]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=268, Expect=2e-85]; ENSG00000167637, ZNF283, zinc finger protein 283, [Score=265, Expect=1e-83]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=265, Expect=9e-84]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=265, Expect=1e-83]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=264, Expect=2e-85]; ENSG00000124459, ZNF45, zinc finger protein 45, [Score=263, Expect=8e-83]; ENSG00000176371, ZSCAN2, zinc finger and SCAN domain containing 2, [Score=263, Expect=2e-83]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=262, Expect=2e-82]; ENSG00000234284, ZNF879, zinc finger protein 879, [Score=261, Expect=3e-83]; ENSG00000196152, ZNF79, zinc finger protein 79, [Score=261, Expect=2e-84]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=261, Expect=2e-80]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=261, Expect=7e-82]; ENSG00000196605, ZNF846, zinc finger protein 846, [Score=261, Expect=6e-84]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=261, Expect=4e-82]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=274, Expect=1e-86]; ENSMUSG00000078906, Gm14444, predicted gene 14444, [Score=273, Expect=6e-90]; ENSMUSG00000078865, Gm14406, predicted gene 14406, [Score=273, Expect=8e-90]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=273, Expect=3e-89]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=271, Expect=2e-87]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=271, Expect=2e-87]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=270, Expect=2e-84]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=269, Expect=4e-86]; ENSMUSG00000078903, Gm14391, predicted gene 14391, [Score=268, Expect=1e-86]; ENSMUSG00000078887, Gm6710, predicted gene 6710, [Score=268, Expect=2e-86]; ENSMUSG00000062861, Zfp28, zinc finger protein 28, [Score=267, Expect=2e-83]; ENSMUSG00000078899, Gm4631, predicted gene 4631, [Score=267, Expect=1e-86]; ENSMUSG00000078897, Gm4724, predicted gene 4724, [Score=267, Expect=1e-86]; ENSMUSG00000078881, Gm14434, predicted gene 14434, [Score=267, Expect=1e-86]; ENSMUSG00000078880, Gm14308, predicted gene 14308, [Score=267, Expect=1e-86]; ENSMUSG00000078886, Gm2026, predicted gene 2026, [Score=267, Expect=1e-86]; ENSMUSG00000094475, Gm11007, predicted gene 11007, [Score=267, Expect=1e-86]; ENSMUSG00000094932, Gm2007, predicted gene 2007, [Score=267, Expect=1e-86]; ENSMUSG00000078878, Gm14305, predicted gene 14305, [Score=267, Expect=2e-86]; ENSMUSG00000044296, Zfp879, zinc finger protein 879, [Score=266, Expect=1e-85]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=266, Expect=2e-82]; ENSMUSG00000030443, Zfp583, zinc finger protein 583, [Score=266, Expect=2e-85]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=265, Expect=1e-86]; ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=265, Expect=3e-86]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=264, Expect=3e-85]; ENSMUSG00000078862, Gm14326, predicted gene 14326, [Score=263, Expect=1e-84]; ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=263, Expect=4e-84]; ENSMUSG00000071302, 2610044O15Rik8, RIKEN cDNA 2610044O15 gene, [Score=261, Expect=2e-85]; ENSMUSG00000095362, Gm14325, predicted gene 14325, [Score=261, Expect=2e-84]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=261, Expect=1e-84]} {Dmel: FBgn0025874, Meics, Meiotic central spindle, [Score=206, Expect=1e-62]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=174, Expect=3e-50]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=156, Expect=1e-45]} {RNA1509_21400, RNA1509_28643, RNA1509_46269, RNA1509_47487, RNA1509_52795} {RNA1310_576.1, RNA1509_21400, RNA1509_46269, RNA1509_47487, RNA1509_52795} {RNA1509_21400, RNA1509_46269, RNA1509_47487, RNA1509_52795, RNA815_1671.1}

Mlig455_027534 {REF} {Length: 373} {Pfam: Domain of unknown function (DUF4774) [PF15999.7, score=20.9]} {RNA1509_34718} {RNA1310_17621} {RNA815_50584}

Mlig455_036771 {REF} {Length: 4521} {RNA1509_6891} {RNA1310_77702} {RNA815_5572.1}

Mlig455_053663 {REF} {Length: 974} {Pfam: Integrase core domain [PF00665.28, score=30.0]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=1e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
11. MligTC455_26260 281 5.86 Mlig455_033712

Neo: -

Age: Up-Down-Down

 2.508 - - 0.771 - 0.961 0.776 Mlig455_033712 {REF} {Length: 4818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.8]} {RNA1509_26340} {RNA1310_17276.1} {RNA815_2054.1}
12. MligTC455_31856 129 2.69 Mlig455_006432

Neo: -

Age: Up-Up-Down

 1.868 - - 0.914 - 0.954 - Mlig455_006432 {REF} {Length: 5683} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=32.0]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.2}
13. MligTC455_26268 55 1.15 Mlig455_048366

Neo: -

Age: -

 CDR1 1.811 - - - - 0.959 0.852 Mlig455_048366 {REF} {Length: 1818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=47.8]} {Human: ENSG00000184258, CDR1, cerebellar degeneration related protein 1, [RH, Score=54.3, Expect=2e-08]} {RNA1509_12420} {RNA1310_46323} {RNA815_13104.1}
14. MligTC455_31865 130 2.71 Mlig455_007329

Neo: -

Age: Up-Down-Down

 1.807 - - 0.845 - 0.962 - Mlig455_007329 {REF} {Length: 3948} {Pfam: Chorion protein [PF01723.18, score=21.5]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7717.1}
15. MligTC455_26267 156 3.26 Mlig455_055846

Neo: -

Age: Up-Down-Down

 1.791 - - - 0.839 0.952 - Mlig455_055846 {REF} {Length: 4335} {Pfam: Mucin-like [PF16058.7, score=19.8]} {RNA1509_53350} {RNA1310_5450.1} {RNA815_7717.1}
16. MligTC455_27847 510 10.62 Mlig455_013053, Mlig455_021443

Neo: -

Age: Down-Up-Down

Regeneration-upregulated BL: 3.564

Regeneration-enriched BL: 3.564

 1.767 - - - 0.817 0.950 -

Mlig455_013053 {REF} {Length: 8840} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=77.1]; Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=47.8]; Aspartyl protease [PF13650.8, score=39.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Retroviral aspartyl protease [PF00077.22, score=28.2]; Aspartyl protease [PF09668.12, score=23.8]; Putative peptidase (DUF1758) [PF05585.14, score=22.0]; Retroviral aspartyl protease [PF08284.13, score=19.2]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=340, Expect=7e-102]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}

Mlig455_021443 {REF} {Length: 1198} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=77.1]; Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=47.8]; Aspartyl protease [PF13650.8, score=39.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Retroviral aspartyl protease [PF00077.22, score=28.2]; Aspartyl protease [PF09668.12, score=23.8]; Putative peptidase (DUF1758) [PF05585.14, score=22.0]; Retroviral aspartyl protease [PF08284.13, score=19.2]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=340, Expect=7e-102]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}
17. MligTC455_31899 54 1.12 Mlig455_038388

Neo: -

Age: logFC(26M/2M)=-0.361

 1.767 - - - - 0.951 0.816 Mlig455_038388 {REF} {Length: 5705} {Mouse: ENSMUSG00000034156, Tspoap1, TSPO associated protein 1, [Score=57.4, Expect=5e-08]} {Smed: dd_Smed_v6_9824_0_1, dd_Smed_v6_9824_0_1, [Score=60.5, Expect=2e-09]} {RNA1509_50962} {RNA1310_2550.1} {RNA815_706}
18. MligTC455_31906 195 4.06 Mlig455_068976

Neo: -

Age: Up-Up-Down

 1.75 - - 0.786 - 0.964 - Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2}
19. MligTC455_38832 316 6.58 Mlig455_052280

Neo: -

Age: logFC(26M/2M)=-1.281

 1.738 - - - 0.767 0.971 - Mlig455_052280 {REF} {Length: 2424} {Pfam: PHD-finger [PF00628.31, score=39.2]} {RNA1509_44038} {RNA1310_30980} {RNA815_17109}
20. MligTC455_27865 53 1.11 Mlig455_035921

Neo: -

Age: -

Regeneration-upregulated R2: 5.914

Regeneration-enriched R2: 5.914

 SPRR3 1.724 - - - - 0.957 0.767 Mlig455_035921 {REF} {Length: 1730} {Pfam: Cornifin (SPRR) family [PF02389.17, score=56.6]; Fibrinogen binding protein [PF08017.13, score=18.2]} {Human: ENSG00000163209, SPRR3, small proline rich protein 3, [RH, Score=71.2, Expect=2e-14]} {RNA1509_35339} {RNA1310_43126.1}
21. MligTC455_32078 88 1.83 Mlig455_059989

Neo: -

Age: Up-Down-Down

 SSTR4 1.715 - - - 0.762 0.953 - Mlig455_059989 {REF} {Length: 7870} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=55.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=20.5]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=55.8, Expect=1e-07]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=57.0, Expect=3e-08]} {RNA1509_17715} {RNA1310_22369} {RNA815_5685.1}
22. MligTC455_28998 88 1.83 Mlig455_007313

Neo: -

Age: -

 1.706 - - 0.747 - 0.959 - Mlig455_007313 {REF} {Length: 2647} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.3]} {Smed: dd_Smed_v6_13734_0_20, dd_Smed_v6_13734_0_20, [Score=51.6, Expect=2e-07]} {RNA1509_13072} {RNA1310_4523} {RNA815_17419}
23. MligTC455_29981 70 1.45 Mlig455_054226

Neo: -

Age: -

 1.661 - - - 0.702 0.959 - Mlig455_054226 {REF} {Length: 956} {Celegans: WBGene00016348, C33E10.6, [Score=98.2, Expect=2e-23]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=84.7, Expect=4e-19]} {RNA1509_8360} {RNA1310_436.1} {RNA815_1671.1}
24. MligTC455_32628 100 2.09 Mlig455_024050

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_024050 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_26279.1} {RNA815_17829.1}
25. MligTC455_19623 1203 25.06 Mlig455_036306

Neo: -

Age: Down-Up-Up

Region-enriched R2: 1.091/0.03774

 CFAP126 0.967 - - - - 0.967 - Mlig455_036306 {REF} {Length: 2572} {Human: ENSG00000188931, CFAP126, cilia and flagella associated protein 126, [RH, Score=84.0, Expect=4e-20]} {Mouse: ENSMUSG00000026649, Cfap126, cilia and flagella associated protein 126, [RH, Score=78.2, Expect=6e-18]} {Smed: dd_Smed_v6_2157_0_1, dd_Smed_v6_2157_0_1, [RH, Score=98.2, Expect=5e-26]} {RNA1509_2614, RNA1509_50597} {RNA1310_17639.1, RNA1509_50597} {RNA1509_50597, RNA815_13460}
26. MligTC455_38550 144 2.99 Mlig455_023834, Mlig455_029141, Mlig455_032134, Mlig455_071048

Neo: -

Age: Up-Down-Up

 0.967 - - - - 0.967 -

Mlig455_023834 {REF} {Length: 434} {Pfam: Integrase core domain [PF00665.28, score=38.1]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=23.1]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=134, Expect=2e-36]} {RNA1509_13774} {RNA1310_6053.2} {RNA815_18197}

Mlig455_029141 {REF} {Length: 714} {TRANSSPLICED} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=26.2]} {RNA1509_13774} {RNA1310_6053.2} {RNA815_16908}

Mlig455_032134 {REF} {Length: 8893} {TRANSSPLICED} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=26.0]} {RNA1509_13774, RNA1509_52826} {RNA1310_6053.2, RNA1509_13774, RNA1509_52826} {RNA1509_13774, RNA1509_52826, RNA815_14204}

Mlig455_071048 {REF} {Length: 6888} {Pfam: Integrase core domain [PF00665.28, score=38.1]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=23.1]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=134, Expect=2e-36]} {RNA1509_13774} {RNA1310_8259.1} {RNA815_14204}
27. MligTC455_54988 22 0.46 Mlig455_008981

Neo: -

Age: -

 TENT5C 0.966 - - - - 0.966 - Mlig455_008981 {REF} {Length: 428} {Pfam: Nucleotidyltransferase [PF07984.14, score=29.9]} {Human: ENSG00000183508, TENT5C, terminal nucleotidyltransferase 5C, [Score=52.4, Expect=3e-08]} {Mouse: ENSMUSG00000044468, Tent5c, terminal nucleotidyltransferase 5C, [Score=48.5, Expect=5e-07]} {RNA1509_49894} {RNA1310_116080} {RNA815_2488.1}
28. MligTC455_54517 38 0.78 Mlig455_049988

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_049988 {REF} {Length: 738} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_13614.1} {RNA815_15623}
29. MligTC455_21813 524 10.92 Mlig455_006857

Neo: -

Age: -

 QRICH2 0.963 - - - - 0.963 - Mlig455_006857 {REF} {Length: 4774} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4795) [PF16043.7, score=162.6]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=157, Expect=6e-39]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [RH, Score=160, Expect=3e-41]} {Dmel: FBgn0031347, CG10869, [RH, Score=67.0, Expect=4e-11]} {Smed: dd_Smed_v6_6048_0_3, dd_Smed_v6_6048_0_3, [RH, Score=554, Expect=0.0]} {RNA1509_53937, RNA1509_56910} {RNA1310_3031.1, RNA1509_53937} {RNA1509_53937, RNA815_1272.1}
30. MligTC455_29003 223 4.64 Mlig455_066978

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_066978 {REF} {Length: 5329} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}
31. MligTC455_21762 134 2.8 Mlig455_031432

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_031432 {REF} {Length: 284} {NoTransDecoderORF} {RNA1509_42914} {RNA1310_99471} {RNA815_64986}
32. MligTC455_37213 82 1.71 Mlig455_035489

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_035489 {REF} {Length: 3502} {RNA1509_42371} {RNA1310_12088.1} {RNA815_3483}
33. MligTC455_10943 424 8.84 Mlig455_066927

Neo: -

Age: logFC(26M/2M)=0.441

 0.961 - - - - 0.961 - Mlig455_066927 {REF} {Length: 2250} {RNA1509_32021} {RNA1310_12733.1, RNA1509_32021} {RNA1509_32021, RNA815_5183.1}
34. MligTC455_49807 1833 38.18 Mlig455_070163

Neo: -

Age: Down-Up-Up

 RAC1 0.96 - - - - 0.960 - Mlig455_070163 {REF} {Length: 1370} {Pfam: Ras family [PF00071.24, score=145.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=46.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.8]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=139, Expect=3e-41]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=136, Expect=5e-40]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=136, Expect=4e-40]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000070831, CDC42, cell division cycle 42, [Score=134, Expect=2e-39]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=134, Expect=2e-39]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=139, Expect=2e-41]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=137, Expect=7e-41]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=136, Expect=2e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=136, Expect=4e-40]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=135, Expect=2e-40]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=144, Expect=1e-43]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=137, Expect=4e-41]} {RNA1509_14417} {RNA1310_34688.1} {RNA815_20638}
35. MligTC455_37055 34 0.71 Mlig455_064258

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_064258 {REF} {Length: 378} {RNA1509_26115} {RNA1310_95542} {RNA815_43072}
36. MligTC455_02646 161 3.36 Mlig455_046275

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_046275 {REF} {Length: 460} {Celegans: WBGene00022511, ZC53.4, [Score=95.9, Expect=6e-24]} {Smed: dd_Smed_v6_15026_0_1, dd_Smed_v6_15026_0_1, [Score=65.5, Expect=8e-15]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}
37. MligTC455_26934 327 6.82 Mlig455_037722

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_037722 {REF} {Length: 4384} {Pfam: Innexin [PF00876.20, score=408.7]; Integrase zinc binding domain [PF17921.3, score=47.6]; Integrase core domain [PF00665.28, score=46.0]} {Dmel: FBgn0085387, shakB, shaking B, [RH, Score=140, Expect=6e-35]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=326, Expect=3e-105]} {Smed: dd_Smed_v6_11077_0_2, dd_Smed_v6_11077_0_2, [Score=464, Expect=2e-157]} {RNA1509_6409} {RNA1310_782} {RNA815_3352}
38. MligTC455_33665 566 11.79 Mlig455_018419, Mlig455_018421, Mlig455_019322, Mlig455_048837

Neo: -

Age: logFC(26M/2M)=-1.062

Region-enriched R2: 2.245/0.00138

 0.954 - - - - 0.954 -

Mlig455_018419 {REF} {Length: 629} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_23746} {RNA815_16073}

Mlig455_018421 {REF} {Length: 1329} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073}

Mlig455_019322 {REF} {Length: 6075} {RNA1509_38197, RNA1509_56039} {RNA1310_15214.1, RNA1509_56039} {RNA1509_56039, RNA815_15612}

Mlig455_048837 {REF} {Length: 2037} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1310_31113, RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1509_15574, RNA1509_25254, RNA1509_35176, RNA815_16073}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA